##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062478_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2493209 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.109662286635416 32.0 32.0 32.0 32.0 32.0 2 30.629764692811552 32.0 32.0 32.0 32.0 32.0 3 30.6158829845392 32.0 32.0 32.0 32.0 32.0 4 30.720035103354753 32.0 32.0 32.0 32.0 32.0 5 30.430245920017136 32.0 32.0 32.0 32.0 32.0 6 34.10014082253032 36.0 36.0 36.0 32.0 36.0 7 33.972311587195456 36.0 36.0 36.0 32.0 36.0 8 33.955057518242555 36.0 36.0 36.0 32.0 36.0 9 34.18584563107225 36.0 36.0 36.0 32.0 36.0 10 33.731288873094876 36.0 36.0 36.0 32.0 36.0 11 34.16488709931658 36.0 36.0 36.0 32.0 36.0 12 33.87010074165463 36.0 36.0 36.0 32.0 36.0 13 34.02911749476277 36.0 36.0 36.0 32.0 36.0 14 33.901491210724814 36.0 36.0 36.0 32.0 36.0 15 33.825101305185406 36.0 36.0 36.0 32.0 36.0 16 33.82718576741862 36.0 36.0 36.0 32.0 36.0 17 33.73645370283839 36.0 36.0 36.0 32.0 36.0 18 33.7549539569286 36.0 36.0 36.0 32.0 36.0 19 33.746938583969495 36.0 36.0 36.0 32.0 36.0 20 33.74764410043442 36.0 36.0 36.0 32.0 36.0 21 33.729323935538496 36.0 36.0 36.0 32.0 36.0 22 33.666802502317296 36.0 36.0 36.0 27.0 36.0 23 33.627463241148256 36.0 36.0 36.0 27.0 36.0 24 33.59500025870274 36.0 36.0 36.0 27.0 36.0 25 33.12108852486895 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 11.0 4 108.0 5 214.0 6 422.0 7 133.0 8 403.0 9 429.0 10 309.0 11 87.0 12 198.0 13 140.0 14 321.0 15 414.0 16 693.0 17 932.0 18 1364.0 19 2062.0 20 3397.0 21 5254.0 22 8369.0 23 12948.0 24 18806.0 25 26420.0 26 36468.0 27 47015.0 28 62195.0 29 82141.0 30 103347.0 31 139899.0 32 195644.0 33 272326.0 34 563743.0 35 906996.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.69990015952815 17.262694360998918 10.787424031589541 26.249981447883393 2 17.206924628880163 19.76908544680783 36.45477772919984 26.56921219511217 3 19.347953832114957 23.34414327687695 28.083230548619674 29.224672342388413 4 12.83864256954972 14.995204297719445 35.5210908608075 36.64506227192334 5 14.854876502591921 36.28833715835594 33.507839958914445 15.3489463801377 6 34.803781910168 34.89936494662679 16.608134429394955 13.688718713810264 7 30.620405496306734 30.248229626050144 20.52963520102233 18.60172967662079 8 28.363984380551244 32.54223108257457 19.396811798649296 19.696972738224897 9 27.232601508347702 14.391612350224126 18.569779649551048 39.80600649187712 10 15.9592098822148 26.446232869423515 31.54817001450881 26.046387233852876 11 37.68721267552694 21.110859459581015 21.909384567443148 19.292543297448898 12 24.714625488877804 23.690361727404387 28.432185248641908 23.162827535075902 13 29.3456034362285 19.328223110692754 25.244280314773437 26.081893138305308 14 23.414183974497472 19.693177720145247 24.79039044924192 32.10224785611536 15 25.262040322668078 27.07201887597822 22.109445176823762 25.55649562452994 16 26.068859122008647 25.63406760951803 23.49673083201058 24.80034243646274 17 24.22761165109367 25.83413283236303 25.0482610946303 24.889994421913006 18 25.013494322745643 24.783126955873563 26.008620301887277 24.194758419493514 19 25.65543372004572 25.18504922731154 25.060504972532794 24.09901208010995 20 25.562186920976988 24.530537076346906 24.90307952899904 25.004196473677066 21 26.52197276135827 24.312688554822667 24.2450176546752 24.920321029143867 22 25.649340737384353 24.601879613472544 24.67506852924825 25.073711119894853 23 24.438298260320174 24.411989985986327 25.33390421619216 25.81580753750134 24 24.760751137807667 25.16551025030965 25.014137250208446 25.05960136167424 25 24.892135218639293 24.656063661406396 25.15812737984267 25.293673740111643 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 219.0 1 219.0 2 652.0 3 1085.0 4 1085.0 5 1085.0 6 2845.0 7 4605.0 8 4605.0 9 4605.0 10 5059.5 11 5514.0 12 5514.0 13 5514.0 14 6592.0 15 7670.0 16 7670.0 17 7670.0 18 12367.5 19 17065.0 20 17065.0 21 17065.0 22 27029.5 23 36994.0 24 36994.0 25 36994.0 26 54451.5 27 71909.0 28 71909.0 29 71909.0 30 88697.5 31 105486.0 32 105486.0 33 105486.0 34 129927.5 35 154369.0 36 154369.0 37 154369.0 38 175452.0 39 196535.0 40 196535.0 41 196535.0 42 223799.0 43 251063.0 44 251063.0 45 251063.0 46 286189.0 47 321315.0 48 321315.0 49 321315.0 50 324557.0 51 327799.0 52 327799.0 53 327799.0 54 307881.0 55 287963.0 56 287963.0 57 287963.0 58 264730.0 59 241497.0 60 241497.0 61 241497.0 62 215380.5 63 189264.0 64 189264.0 65 189264.0 66 157532.5 67 125801.0 68 125801.0 69 125801.0 70 96290.0 71 66779.0 72 66779.0 73 66779.0 74 52635.0 75 38491.0 76 38491.0 77 38491.0 78 31048.0 79 23605.0 80 23605.0 81 23605.0 82 16861.5 83 10118.0 84 10118.0 85 10118.0 86 7459.0 87 4800.0 88 4800.0 89 4800.0 90 3272.5 91 1745.0 92 1745.0 93 1745.0 94 1071.0 95 397.0 96 397.0 97 397.0 98 759.0 99 1121.0 100 1121.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009305276854046331 2 0.003168607204610604 3 0.0053745995622508985 4 0.014118351088897882 5 0.034052500211574716 6 0.04552366047130425 7 0.06597922596942335 8 0.08872100172909692 9 0.0964219205048594 10 0.12024663796737457 11 0.12004609320758908 12 0.13328204735343085 13 0.12181088709370133 14 0.12445807792286968 15 0.11423029517381013 16 0.11310724451901145 17 0.12465862268265518 18 0.13127659975557604 19 0.13360291896908763 20 0.12124936176630197 21 0.12903049844597866 22 0.150849768310639 23 0.1403011139459227 24 0.13368313687300182 25 0.1317980161310183 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2493209.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.56318231057736 #Duplication Level Percentage of deduplicated Percentage of total 1 78.80506692728592 41.42245099896181 2 12.786348127010749 13.441822953731508 3 3.7067483431502293 5.845154668213082 4 1.564157074078602 3.288682937886913 5 0.8264976001858654 2.1721672018912157 6 0.5120906033603484 1.6150267046378133 7 0.3235458107738891 1.1904618206272048 8 0.23641086407393425 0.9941205878815464 9 0.16748801277921443 0.7923332655495142 >10 0.892450482056522 8.504454521313388 >50 0.08095143700904922 3.0077371420738177 >100 0.08059289111570593 9.14880586418464 >500 0.012914107286867411 4.64653142582639 >1k 0.004737719833051467 3.9302499072212624 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3767 0.1510904220223816 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2579 0.10344098709735125 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2567 0.1029596796738661 No Hit GTACATGGAAGCAGTGGTATCAACG 2552 0.10235804539450964 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.010895195709626E-5 2 0.0 0.0 0.0 0.0 4.010895195709626E-5 3 0.0 0.0 0.0 0.0 4.010895195709626E-5 4 0.0 0.0 0.0 0.0 4.010895195709626E-5 5 0.0 0.0 0.0 0.0 4.010895195709626E-5 6 0.0 0.0 0.0 0.0 4.010895195709626E-5 7 0.0 0.0 0.0 0.0 4.010895195709626E-5 8 0.0 0.0 0.0 1.2032685587128877E-4 4.010895195709626E-5 9 0.0 0.0 0.0 1.6043580782838503E-4 4.010895195709626E-5 10 0.0 0.0 0.0 1.6043580782838503E-4 4.010895195709626E-5 11 0.0 0.0 0.0 1.6043580782838503E-4 4.010895195709626E-5 12 0.0 0.0 0.0 1.6043580782838503E-4 2.4065371174257754E-4 13 0.0 0.0 0.0 1.6043580782838503E-4 2.4065371174257754E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCGA 30 7.7188056E-4 19.002089 10 CGAACGA 175 0.0 13.574011 16 AAGACGG 520 0.0 12.056354 5 CGCGTAA 145 9.640644E-11 11.7944 10 TCGCGTA 145 9.640644E-11 11.7944 9 CGCATCG 440 0.0 11.661076 13 GGTTCTA 490 0.0 11.634633 13 TCCATTA 500 0.0 11.590575 8 CGGTCCA 460 0.0 11.566489 10 CAAGACG 505 0.0 11.473743 4 CGACCAT 340 0.0 11.457142 10 CGGTTCT 515 0.0 11.43838 12 CGCAAGA 475 0.0 11.394158 2 ACGAACG 210 0.0 11.311221 15 ACGGTAT 370 0.0 11.298539 9 CGCCAGT 455 0.0 11.276871 18 GTCTTAC 155 3.1650416E-10 11.024834 1 GCTCGTA 175 2.0008883E-11 10.858336 9 TCGCCAG 495 0.0 10.749736 17 ATCGCCA 505 0.0 10.724813 16 >>END_MODULE