##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062478_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2493209 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.298279446287896 32.0 32.0 32.0 32.0 32.0 2 31.407259078561005 32.0 32.0 32.0 32.0 32.0 3 31.492252354295207 32.0 32.0 32.0 32.0 32.0 4 31.59257767800453 32.0 32.0 32.0 32.0 32.0 5 31.526407533423793 32.0 32.0 32.0 32.0 32.0 6 35.11198780366989 36.0 36.0 36.0 36.0 36.0 7 35.12908584879968 36.0 36.0 36.0 36.0 36.0 8 35.07061822735278 36.0 36.0 36.0 36.0 36.0 9 35.21080823950178 36.0 36.0 36.0 36.0 36.0 10 35.07515013783441 36.0 36.0 36.0 36.0 36.0 11 35.21375103330688 36.0 36.0 36.0 36.0 36.0 12 35.11789063812942 36.0 36.0 36.0 36.0 36.0 13 35.16307216924052 36.0 36.0 36.0 36.0 36.0 14 35.12696087652499 36.0 36.0 36.0 36.0 36.0 15 35.084140559415594 36.0 36.0 36.0 36.0 36.0 16 35.1001179604277 36.0 36.0 36.0 36.0 36.0 17 35.06804082610002 36.0 36.0 36.0 36.0 36.0 18 35.08845427719858 36.0 36.0 36.0 36.0 36.0 19 35.072736381105635 36.0 36.0 36.0 36.0 36.0 20 35.06320649412063 36.0 36.0 36.0 36.0 36.0 21 35.063753580225324 36.0 36.0 36.0 36.0 36.0 22 35.0411706359154 36.0 36.0 36.0 36.0 36.0 23 35.00516763737015 36.0 36.0 36.0 36.0 36.0 24 34.98245313569781 36.0 36.0 36.0 36.0 36.0 25 34.95746365427046 36.0 36.0 36.0 32.0 36.0 26 34.91135721072722 36.0 36.0 36.0 32.0 36.0 27 34.89219114803452 36.0 36.0 36.0 32.0 36.0 28 34.88351879044236 36.0 36.0 36.0 32.0 36.0 29 34.85878039105426 36.0 36.0 36.0 32.0 36.0 30 34.84919234608891 36.0 36.0 36.0 32.0 36.0 31 34.846256370805655 36.0 36.0 36.0 32.0 36.0 32 34.81166560845882 36.0 36.0 36.0 32.0 36.0 33 34.795166389981745 36.0 36.0 36.0 32.0 36.0 34 34.787252492671094 36.0 36.0 36.0 32.0 36.0 35 34.756127945952386 36.0 36.0 36.0 32.0 36.0 36 34.732054552987734 36.0 36.0 36.0 32.0 36.0 37 34.72341829345233 36.0 36.0 36.0 32.0 36.0 38 34.68870158899635 36.0 36.0 36.0 32.0 36.0 39 34.6819251815632 36.0 36.0 36.0 32.0 36.0 40 34.672932754534415 36.0 36.0 36.0 32.0 36.0 41 34.6460790090201 36.0 36.0 36.0 32.0 36.0 42 34.62097922797487 36.0 36.0 36.0 32.0 36.0 43 34.61447395705695 36.0 36.0 36.0 32.0 36.0 44 34.58898913007293 36.0 36.0 36.0 32.0 36.0 45 34.547485188766764 36.0 36.0 36.0 32.0 36.0 46 34.55774906957259 36.0 36.0 36.0 32.0 36.0 47 34.53128197435514 36.0 36.0 36.0 32.0 36.0 48 34.49625843641668 36.0 36.0 36.0 32.0 36.0 49 34.48714889124819 36.0 36.0 36.0 32.0 36.0 50 33.97561656483672 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 9.0 21 58.0 22 174.0 23 536.0 24 1524.0 25 3621.0 26 7423.0 27 13973.0 28 23635.0 29 37025.0 30 54521.0 31 79084.0 32 118005.0 33 195383.0 34 432902.0 35 1525330.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.200591371559206 17.744556529496975 11.31360142551755 26.74125067342627 2 16.525491712405803 20.27660878480172 36.19001702281957 27.007882479972917 3 18.6924884305032 23.655479677875046 28.42650832626743 29.225523565354322 4 12.55869956890812 15.47394437037643 35.8320057243611 36.13535033635434 5 14.551974805150634 36.426844451004484 33.48637578573469 15.534804958110193 6 34.835699167455815 35.16134479329986 16.417288457689533 13.585667581554798 7 30.536694305767632 30.24113120170126 20.61020204098577 18.611972451545338 8 28.367056271656327 32.70495975267216 19.35084463436479 19.577139341306726 9 27.33906383299595 14.156895791728651 18.436641292406694 40.067399082868704 10 15.901996182429952 26.53098877791633 31.56273701883797 26.004278020815747 11 37.82562954008268 21.014924942112756 21.950987662887467 19.208457854917096 12 24.735511543556918 23.595334366272542 28.416029301995945 23.2531247881746 13 29.454971484540604 19.17235979815571 25.294710551742757 26.077958165560926 14 23.36799682657972 19.594025210080662 24.792907453807523 32.24507050953209 15 25.32900370566607 26.964927529140155 22.105126365258588 25.600942399935185 16 26.017072776490057 25.632267491413675 23.48126450690656 24.869395225189706 17 24.23892260937611 25.84488504573824 25.020365320356213 24.89582702452943 18 25.18769986792122 24.650320129600047 26.01165806797585 24.150321934502884 19 25.660945392063 25.085823129950196 25.08542204043063 24.16780943755618 20 25.646947367829974 24.343125666560645 24.937780988276554 25.072145977332827 21 26.61152755344618 24.26916475915176 24.242091216580718 24.877216470821338 22 25.668405657127018 24.532600355605968 24.724321145960886 25.07467284130612 23 24.52373627722345 24.22456360457547 25.358804656970197 25.892895461230886 24 24.834620763842903 25.08987413409786 24.94018752539398 25.135317576665255 25 24.958477207486414 24.57511584468049 25.128619381688416 25.337787566144677 26 24.57086429577304 25.203743448704056 25.534963173965757 24.69042908155714 27 25.401721235564285 24.883593794182516 24.65697821562492 25.057706754628274 28 24.603753636377856 24.637084175454206 25.48446600345178 25.274696184716163 29 24.646830650779776 24.90348783435324 25.379942074651584 25.0697394402154 30 24.687741781776015 24.91463812299731 25.624366027878125 24.773254067348546 31 25.110048936932284 24.73466925556582 24.6777546527387 25.477527154763198 32 24.776583110360985 24.866186509033135 24.74473660250705 25.612493778098827 33 24.476848912385606 24.439146497545934 25.337988110904462 25.746016479164002 34 25.054778801135402 24.60222949620349 25.5739089663161 24.76908273634501 35 25.63728111040831 24.528027935082857 25.25941467402051 24.575276280488318 36 24.59833892786365 24.984267263594827 25.140812503083374 25.276581305458144 37 25.63487457329089 24.711967588758103 24.730899014081853 24.922258823869157 38 24.706272117580195 24.569380264550624 25.387843538187134 25.336504079682047 39 25.157658262905358 24.57150603900435 24.701860132864915 25.568975565225376 40 25.397309250849005 24.689586793566043 25.359606836009334 24.553497119575614 41 24.54375064425004 24.924665360986584 25.620836440105904 24.910747554657473 42 25.56769207876275 25.116426260293462 25.049283874717283 24.266597786226505 43 24.701980459720787 24.25380303055219 25.44311367398401 25.60110283574301 44 24.566612746865584 24.63203044750761 25.251192338869306 25.5501644667575 45 24.53396405997251 24.98575129481724 25.305299315059425 25.17498533015082 46 24.50835409975987 24.498727943568262 25.505784317146553 25.487133639525318 47 24.704828195309737 24.405535195805886 25.71056016563393 25.179076443250448 48 25.246499591490323 25.256045522056112 24.80341599922028 24.69403888723328 49 24.276143716792294 25.01727693105552 25.295592948685808 25.410986403466374 50 24.129956265181242 25.466547516292266 25.12919098607096 25.274305232455536 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 26.0 1 31.0 2 36.0 3 123.5 4 211.0 5 257.5 6 304.0 7 291.0 8 278.0 9 370.5 10 463.0 11 687.0 12 911.0 13 1596.5 14 2282.0 15 3165.0 16 4048.0 17 4863.0 18 5678.0 19 6276.5 20 6875.0 21 8491.0 22 10107.0 23 11003.5 24 11900.0 25 14945.0 26 17990.0 27 22363.5 28 26737.0 29 30608.5 30 34480.0 31 37147.5 32 39815.0 33 45890.5 34 51966.0 35 60212.0 36 68458.0 37 82011.0 38 95564.0 39 102087.5 40 108611.0 41 118858.0 42 129105.0 43 131434.0 44 133763.0 45 147028.5 46 160294.0 47 169809.0 48 179324.0 49 183873.5 50 188423.0 51 182102.5 52 175782.0 53 173005.5 54 170229.0 55 171621.0 56 173013.0 57 169923.5 58 166834.0 59 152264.5 60 137695.0 61 122079.0 62 106463.0 63 93283.5 64 80104.0 65 68783.5 66 57463.0 67 50991.5 68 44520.0 69 40911.0 70 37302.0 71 29509.0 72 21716.0 73 19309.5 74 16903.0 75 12590.0 76 8277.0 77 7488.5 78 6700.0 79 5827.0 80 4954.0 81 3979.5 82 3005.0 83 2578.0 84 2151.0 85 1785.5 86 1420.0 87 1062.5 88 705.0 89 471.0 90 237.0 91 143.5 92 50.0 93 33.5 94 17.0 95 11.5 96 6.0 97 7.5 98 9.0 99 7.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014439222704554652 2 0.0034092609163531816 3 6.016342793564438E-4 4 2.005447597854813E-4 5 4.010895195709626E-5 6 3.2087161565677006E-4 7 8.021790391419251E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.021790391419251E-5 47 0.0 48 0.0 49 0.0 50 4.010895195709626E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2493209.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.72101882827447 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7196196390285 43.07617788421882 2 13.037930503160819 14.268976810903943 3 3.755484358716571 6.165117909078593 4 1.5388895620433196 3.368384187968302 5 0.7985477652708313 2.184867364933083 6 0.47536909529052485 1.5607608728263567 7 0.30767475850268383 1.1785393377107112 8 0.22455125417708718 0.9830138726189628 9 0.15286106605687536 0.7528241946427545 >10 0.8279095257481235 8.071783603130969 >50 0.07523346521547267 2.877760284033206 >100 0.07119983137543488 8.367892995107086 >500 0.010973235683331362 4.095948156195117 >1k 0.0037559397305354067 3.0479525266320007 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2693 0.10801340762046023 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.021790391419251E-5 2 0.0 0.0 0.0 0.0 8.021790391419251E-5 3 0.0 0.0 0.0 0.0 8.021790391419251E-5 4 0.0 0.0 0.0 0.0 8.021790391419251E-5 5 0.0 0.0 0.0 0.0 8.021790391419251E-5 6 0.0 0.0 0.0 0.0 8.021790391419251E-5 7 0.0 0.0 0.0 0.0 8.021790391419251E-5 8 0.0 0.0 0.0 0.0 8.021790391419251E-5 9 0.0 0.0 0.0 0.0 8.021790391419251E-5 10 0.0 0.0 0.0 4.010895195709626E-5 1.2032685587128877E-4 11 0.0 0.0 0.0 4.010895195709626E-5 1.2032685587128877E-4 12 0.0 0.0 0.0 4.010895195709626E-5 2.0054475978548128E-4 13 0.0 0.0 0.0 4.010895195709626E-5 2.4065371174257754E-4 14 0.0 0.0 0.0 8.021790391419251E-5 2.4065371174257754E-4 15 0.0 0.0 0.0 1.2032685587128877E-4 2.8076266369967377E-4 16 0.0 0.0 0.0 1.6043580782838503E-4 2.8076266369967377E-4 17 0.0 0.0 0.0 2.0054475978548128E-4 2.8076266369967377E-4 18 0.0 0.0 0.0 2.4065371174257754E-4 3.2087161565677006E-4 19 0.0 0.0 0.0 2.8076266369967377E-4 3.2087161565677006E-4 20 0.0 0.0 0.0 5.615253273993475E-4 3.609805676138663E-4 21 0.0 0.0 0.0 7.620700871848289E-4 4.0108951957096257E-4 22 0.0 0.0 0.0 0.0014439222704554651 4.813074234851551E-4 23 0.0 0.0 0.0 0.0021257744537261014 4.813074234851551E-4 24 0.0 0.0 0.0 0.003288934060481893 4.813074234851551E-4 25 0.0 0.0 0.0 0.004051004147666722 4.813074234851551E-4 26 0.0 0.0 0.0 0.005214163754422513 6.417432313135401E-4 27 0.0 0.0 0.0 0.0073800471601057115 6.818521832706363E-4 28 0.0 0.0 0.0 0.01371726156932692 6.818521832706363E-4 29 0.0 0.0 0.0 0.026110927724069664 6.818521832706363E-4 30 0.0 0.0 0.0 0.049334010907228394 6.818521832706363E-4 31 0.0 0.0 0.0 0.09578017727354586 7.620700871848289E-4 32 0.0 0.0 0.0 0.15125085783020997 7.620700871848289E-4 33 0.0 0.0 0.0 0.20900774864842858 7.620700871848289E-4 34 0.0 0.0 0.0 0.2761501342246077 8.021790391419251E-4 35 0.0 0.0 0.0 0.34746385080432485 8.021790391419251E-4 36 0.0 0.0 0.0 0.4520679975084319 8.021790391419251E-4 37 0.0 0.0 0.0 0.602917765819071 8.021790391419251E-4 38 0.0 0.0 0.0 0.7992911946010142 8.422879910990214E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGTA 50 8.3451785E-5 26.39988 4 CGCAATA 755 0.0 20.397257 36 TTAACGG 450 0.0 20.044352 35 CGTCGTA 485 0.0 19.505066 10 TACCGTC 515 0.0 19.223213 7 TAACGGC 465 0.0 18.924644 36 CCGTCGT 490 0.0 18.857058 9 ATACGAA 840 0.0 18.595154 40 ATACCGT 545 0.0 18.568722 6 CAATACG 850 0.0 18.117565 38 AATACGA 875 0.0 17.59992 39 CTAGCGG 880 0.0 17.49992 29 GTATCAA 4735 0.0 17.426159 1 ACCGTCG 535 0.0 17.27095 8 TAGCGGC 935 0.0 16.9411 30 TCTAGCG 915 0.0 16.830526 28 CTAACGC 80 0.0019892096 16.499926 3 GGCGTTA 590 0.0 16.406704 42 GCAATAC 940 0.0 16.382904 37 CGGTCCA 940 0.0 16.382904 10 >>END_MODULE