##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062476_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1127454 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.998519673529916 32.0 32.0 32.0 32.0 32.0 2 30.648359046134033 32.0 32.0 32.0 32.0 32.0 3 30.65441073427386 32.0 32.0 32.0 32.0 32.0 4 30.71396527042345 32.0 32.0 32.0 32.0 32.0 5 30.492401463829122 32.0 32.0 32.0 32.0 32.0 6 34.12119962322188 36.0 36.0 36.0 32.0 36.0 7 33.9618574238949 36.0 36.0 36.0 32.0 36.0 8 33.941840642722454 36.0 36.0 36.0 32.0 36.0 9 34.127646005956784 36.0 36.0 36.0 32.0 36.0 10 33.78045756190497 36.0 36.0 36.0 32.0 36.0 11 34.16505063621221 36.0 36.0 36.0 32.0 36.0 12 33.925000044347705 36.0 36.0 36.0 32.0 36.0 13 34.03197558392626 36.0 36.0 36.0 32.0 36.0 14 33.93136039253043 36.0 36.0 36.0 32.0 36.0 15 33.879029210947856 36.0 36.0 36.0 32.0 36.0 16 33.84734632188985 36.0 36.0 36.0 32.0 36.0 17 33.7576344578138 36.0 36.0 36.0 32.0 36.0 18 33.7839202308919 36.0 36.0 36.0 32.0 36.0 19 33.752579706134355 36.0 36.0 36.0 32.0 36.0 20 33.74724822476128 36.0 36.0 36.0 32.0 36.0 21 33.70050662820834 36.0 36.0 36.0 27.0 36.0 22 33.64189847213279 36.0 36.0 36.0 27.0 36.0 23 33.56628740507373 36.0 36.0 36.0 27.0 36.0 24 33.51527955907736 36.0 36.0 36.0 27.0 36.0 25 33.00208789006026 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 6.0 4 44.0 5 104.0 6 194.0 7 48.0 8 167.0 9 180.0 10 152.0 11 40.0 12 79.0 13 68.0 14 258.0 15 326.0 16 561.0 17 721.0 18 1008.0 19 1535.0 20 2116.0 21 3148.0 22 4431.0 23 6558.0 24 8625.0 25 11736.0 26 15859.0 27 20498.0 28 26663.0 29 34945.0 30 44858.0 31 60817.0 32 86663.0 33 122085.0 34 253217.0 35 419743.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.09771739641443 16.81868944332432 11.144335447725778 25.93925771253547 2 15.678731687154466 20.029554229616494 38.131697266056364 26.160016817172675 3 19.759481567290344 24.33337650057921 29.24504034954825 26.662101582582192 4 12.534562947810283 15.871412084368632 35.27429918273099 36.31972578509009 5 13.574520113784983 37.28960336741086 34.410019892851885 14.725856625952275 6 32.7748183761537 35.07738369374142 17.72144709858845 14.42635083151643 7 28.858282462328237 31.766760805392003 20.55292152522486 18.822035207054903 8 28.094619631460688 33.325669117144436 19.837418005463196 18.742293245931677 9 28.083749720337085 14.287489923256945 18.220970989633827 39.407789366772136 10 15.765651363111624 26.87026019003641 32.138975224225206 25.225113222626767 11 36.71072109488708 21.340956054797637 20.758773367006867 21.189549483308426 12 22.959682117887798 23.56983246177457 30.14267038026488 23.327815040072757 13 30.31165498163993 20.31143297353219 25.372773813699677 24.0041382311282 14 24.27733858119473 18.927912358820155 25.14151286892365 31.653236191061467 15 27.12441717878571 25.175301433222963 24.073279861623526 23.627001526367806 16 25.93035573326088 26.235361287292147 24.04935495986979 23.784928019577183 17 22.728580588211265 25.88951901234217 27.00473687856221 24.37716352088436 18 24.812946209324405 24.860281364424743 27.87490020097459 22.45187222527626 19 25.50659818772974 26.86637815044703 24.015112021321663 23.611911640501567 20 25.16892146894411 23.382425418363134 27.67807905942111 23.770574053271645 21 24.891051527054834 24.725597273868086 24.91369824447975 25.469652954597326 22 24.25699743286817 25.76849622924754 24.872309619193974 25.102196718690315 23 23.212534727896717 25.72058165230181 25.398438221647467 25.668445398154006 24 24.409641828505045 27.23058982973776 24.18468004003663 24.175088301720564 25 25.314055568630412 25.095049267536712 24.0963769821358 25.494518181697078 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 263.0 1 263.0 2 632.5 3 1002.0 4 1002.0 5 1002.0 6 2632.0 7 4262.0 8 4262.0 9 4262.0 10 3955.0 11 3648.0 12 3648.0 13 3648.0 14 3011.0 15 2374.0 16 2374.0 17 2374.0 18 4354.0 19 6334.0 20 6334.0 21 6334.0 22 9997.0 23 13660.0 24 13660.0 25 13660.0 26 20224.5 27 26789.0 28 26789.0 29 26789.0 30 36352.5 31 45916.0 32 45916.0 33 45916.0 34 57095.5 35 68275.0 36 68275.0 37 68275.0 38 74825.5 39 81376.0 40 81376.0 41 81376.0 42 99766.0 43 118156.0 44 118156.0 45 118156.0 46 162902.0 47 207648.0 48 207648.0 49 207648.0 50 185181.0 51 162714.0 52 162714.0 53 162714.0 54 145674.5 55 128635.0 56 128635.0 57 128635.0 58 115161.5 59 101688.0 60 101688.0 61 101688.0 62 85129.0 63 68570.0 64 68570.0 65 68570.0 66 55161.0 67 41752.0 68 41752.0 69 41752.0 70 32463.5 71 23175.0 72 23175.0 73 23175.0 74 18274.0 75 13373.0 76 13373.0 77 13373.0 78 9296.0 79 5219.0 80 5219.0 81 5219.0 82 3275.0 83 1331.0 84 1331.0 85 1331.0 86 920.0 87 509.0 88 509.0 89 509.0 90 338.5 91 168.0 92 168.0 93 168.0 94 130.5 95 93.0 96 93.0 97 93.0 98 308.5 99 524.0 100 524.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008958236877069928 2 0.0031043395118559164 3 0.0049669432189694655 4 0.014457352583786123 5 0.03689729248377317 6 0.0476294376533322 7 0.06634417013909215 8 0.08931628252682593 9 0.09738756525765131 10 0.12009359140151173 11 0.11947272349914055 12 0.13322051276593103 13 0.12142402262087855 14 0.12488314379123229 15 0.11095796369519288 16 0.11042579120744615 17 0.12381879881573882 18 0.1278100924738393 19 0.1297613915955773 20 0.1187631601821449 21 0.1297613915955773 22 0.14936307822758177 23 0.1381874559849005 24 0.1317126907173153 25 0.12940660993707948 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1127454.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.238701947168096 #Duplication Level Percentage of deduplicated Percentage of total 1 79.8341399246513 31.32588021711905 2 12.233674919478569 9.600670477679305 3 3.460998621873685 4.074152800897832 4 1.3502545021190488 2.119289358458848 5 0.6608067170318094 1.296459890714891 6 0.3949483823446959 0.9298357115603826 7 0.2732661693063352 0.7505826838758963 8 0.1910428793809682 0.5997019682526878 9 0.13990564618391474 0.4940744356202927 >10 1.0406527876070704 8.509349252534586 >50 0.17605512703016366 4.8951915232286325 >100 0.20346974216783387 16.594130084787174 >500 0.02854920657722041 7.6232799689230575 >1k 0.011555631233636834 8.355432778963195 >5k 2.265810045811144E-4 0.5026826943493535 >10k+ 4.531620091622288E-4 2.329286153034792 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 14399 1.277125275177524 No Hit TCCATGTACTCTGCGTTGATACCAC 11800 1.046605892568566 No Hit GAGTACATGGAAGCAGTGGTATCAA 5654 0.5014838742866672 No Hit CATGTACTCTGCGTTGATACCACTG 4630 0.41065976971122553 No Hit GTATCAACGCAGAGTACTTTTTTTT 3830 0.3397034380116617 No Hit GCTTCCATGTACTCTGCGTTGATAC 3605 0.31974696972115935 No Hit CCCATGTACTCTGCGTTGATACCAC 3402 0.301741800552395 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3223 0.2858653213346176 No Hit GTACATGGGAAGCAGTGGTATCAAC 3200 0.2838253267982552 No Hit GCGTTGATACCACTGCTTCCATGTA 3107 0.2755766532381809 No Hit CATGGAAGCAGTGGTATCAACGCAG 3047 0.2702549283607136 No Hit TATCAACGCAGAGTACTTTTTTTTT 2749 0.2438236948026261 No Hit GTTATAGCCTGTGGTGATGCGGCGC 2732 0.24231587275401037 No Hit GTATCAACGCAGAGTACATGGAAGC 2482 0.22014201909789669 No Hit CAAGTAGAGTGATCGAAAGATGAAA 2373 0.2104742189038311 No Hit GGCTATAACACTCCCCGAGGGGAGC 2329 0.20657162066035512 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2153 0.19096122768645107 No Hit CATCAGGATCGGTCGATGGTGCAGG 1939 0.17198040895681774 No Hit ACTCTGCGTTGATACCACTGCTTCC 1930 0.17118215022519767 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1910 0.16940824193270856 No Hit CTCTACTTGTGCGCTATCGGTCTCT 1901 0.16860998320108847 No Hit CAGTGGTATCAACGCAGAGTACATG 1862 0.16515086203073473 No Hit ATCCTGATGTCCTCGGATGGATTTG 1802 0.15982913715326746 No Hit GTGTTATAGCCTGTGGTGATGCGGC 1674 0.14847612408133726 No Hit CTTCTAGGTAGCGACCGGTCTAAGT 1595 0.1414691863260053 No Hit TATCAACGCAGAGTACATGGAAGCA 1579 0.14005005969201403 No Hit CTTTTGTGCCGTCTGGTGCGCTCCC 1579 0.14005005969201403 No Hit GTCTAACATCTATGCGAGTGTTCGG 1572 0.13942919178964286 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1555 0.13792136974102712 No Hit GTTCTAAGTTGGTTGTTAAGCGCGC 1537 0.13632485227778696 No Hit GTATCAACGCAGAGTACATGGGAAG 1499 0.13295442652205766 No Hit GTACATGGGGTGGTATCAACGCAAA 1423 0.1262135750105991 No Hit ATCCTAAGCCATAGGGAAATTCCGT 1382 0.12257706301099645 No Hit GGTATGGGTAGCACGCTTAAGCGCC 1370 0.12151271803550301 No Hit ACCTAGAAGCATCCTCTACAAATTA 1358 0.12044837306000955 No Hit ATGTTAGACTCCTTGGTCCGTGTTT 1339 0.1187631601821449 No Hit CTATAACACTCCCCGAGGGGAGCTA 1307 0.11592490691416234 No Hit GGTATCAACGCAGAGTACTTTTTTT 1287 0.11415099862167326 No Hit GGTTAAGGTTGTTTCAACCCCAAGG 1258 0.11157883159756407 No Hit GTGCTGGAAGGCGCCGGCCGTGAAG 1245 0.11042579120744615 No Hit GCACAAAAGTGTGCCGCTCTACCAG 1204 0.10678927920784352 No Hit TTCCAGCACCCCGTGGCGGACGCCC 1155 0.10244320389124523 No Hit CTCCTTAGCGGATTCCGACTTCCAT 1145 0.10155624974500067 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 8.869541462445474E-5 0.0 12 0.0 0.0 0.0 1.7739082924890948E-4 0.0 13 0.0 1.7739082924890948E-4 0.0 1.7739082924890948E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGAT 60 1.4650432E-6 15.834259 14 TTATACC 80 7.717972E-9 15.435661 4 TCCTGAT 285 0.0 14.993552 2 CCGTCTG 270 0.0 14.779299 9 CTGGACT 45 6.766396E-4 14.776016 4 GCGAAAT 65 3.371193E-6 14.614942 12 CGGTCGA 275 0.0 14.509938 10 GTACATA 105 8.913048E-11 14.468685 1 TATGGGT 230 0.0 14.452231 3 TCCTCGG 290 0.0 14.414635 10 TTAGGGT 60 2.5699082E-5 14.248302 4 GCCGTCT 255 0.0 14.1583185 8 CGATCCC 75 9.645028E-7 13.936005 17 CTTTAGA 150 0.0 13.934767 9 TCGGTCG 280 0.0 13.912145 9 TGATCGA 370 0.0 13.865676 10 GTGATCG 350 0.0 13.84428 9 AGTGATC 360 0.0 13.723633 8 TAATACT 90 3.6408892E-8 13.720587 4 AAACTTT 215 0.0 13.7003 17 >>END_MODULE