##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062476_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1127454 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.151684237228302 32.0 32.0 32.0 32.0 32.0 2 31.355552421650906 32.0 32.0 32.0 32.0 32.0 3 31.4596249603088 32.0 32.0 32.0 32.0 32.0 4 31.58654721168225 32.0 32.0 32.0 32.0 32.0 5 31.502662636347026 32.0 32.0 32.0 32.0 32.0 6 35.09532805773007 36.0 36.0 36.0 36.0 36.0 7 35.108338788101335 36.0 36.0 36.0 36.0 36.0 8 35.05429401110821 36.0 36.0 36.0 36.0 36.0 9 35.173571604695184 36.0 36.0 36.0 36.0 36.0 10 35.06612686637326 36.0 36.0 36.0 36.0 36.0 11 35.18659918719522 36.0 36.0 36.0 36.0 36.0 12 35.10276782910877 36.0 36.0 36.0 36.0 36.0 13 35.129225671291245 36.0 36.0 36.0 36.0 36.0 14 35.080782009731664 36.0 36.0 36.0 36.0 36.0 15 35.05512597409739 36.0 36.0 36.0 36.0 36.0 16 35.054825296641816 36.0 36.0 36.0 36.0 36.0 17 35.02843131515787 36.0 36.0 36.0 36.0 36.0 18 35.03842107970702 36.0 36.0 36.0 36.0 36.0 19 34.9942135111499 36.0 36.0 36.0 36.0 36.0 20 34.98765714610086 36.0 36.0 36.0 36.0 36.0 21 34.93531620802268 36.0 36.0 36.0 32.0 36.0 22 34.916127842022824 36.0 36.0 36.0 32.0 36.0 23 34.83988082884091 36.0 36.0 36.0 32.0 36.0 24 34.81652111749127 36.0 36.0 36.0 32.0 36.0 25 34.77582588735328 36.0 36.0 36.0 32.0 36.0 26 34.71435198243121 36.0 36.0 36.0 32.0 36.0 27 34.68415296765988 36.0 36.0 36.0 32.0 36.0 28 34.63363738121467 36.0 36.0 36.0 32.0 36.0 29 34.60559721283529 36.0 36.0 36.0 32.0 36.0 30 34.57923959647134 36.0 36.0 36.0 32.0 36.0 31 34.53956613750982 36.0 36.0 36.0 32.0 36.0 32 34.491886143470154 36.0 36.0 36.0 32.0 36.0 33 34.44961390886014 36.0 36.0 36.0 32.0 36.0 34 34.4175505164734 36.0 36.0 36.0 32.0 36.0 35 34.33348766335478 36.0 36.0 36.0 32.0 36.0 36 34.29884323440247 36.0 36.0 36.0 32.0 36.0 37 34.20376174992505 36.0 36.0 36.0 32.0 36.0 38 34.1495014430744 36.0 36.0 36.0 32.0 36.0 39 33.98141121500301 36.0 36.0 36.0 32.0 36.0 40 33.90233481809457 36.0 36.0 36.0 32.0 36.0 41 33.90162525477758 36.0 36.0 36.0 32.0 36.0 42 33.74853164741089 36.0 36.0 36.0 32.0 36.0 43 33.7670343978557 36.0 36.0 36.0 32.0 36.0 44 33.7623699060006 36.0 36.0 36.0 32.0 36.0 45 33.568759346279315 36.0 36.0 36.0 21.0 36.0 46 33.67157241004954 36.0 36.0 36.0 27.0 36.0 47 33.54997720527844 36.0 36.0 36.0 21.0 36.0 48 33.563094370147255 36.0 36.0 36.0 21.0 36.0 49 33.59599327333976 36.0 36.0 36.0 21.0 36.0 50 33.051218941083185 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 12.0 21 40.0 22 141.0 23 448.0 24 1123.0 25 2903.0 26 6432.0 27 11613.0 28 18955.0 29 26389.0 30 35647.0 31 48029.0 32 69438.0 33 94128.0 34 192537.0 35 619619.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.369268872966686 17.488625345630705 11.844100038410804 26.298005742991805 2 15.250072954760952 20.42786525943068 37.61689392776903 26.705167858039346 3 19.23503345608844 24.35846265193605 29.67374105058504 26.732762841390468 4 12.470519783121395 16.35920319375299 35.21971243096152 35.95056459216409 5 13.374482129188534 37.365903501077206 34.35761845504868 14.901995914685578 6 33.19422874116701 35.41836482182343 17.18658671035231 14.20081972665726 7 28.76897860134427 31.611311858399542 20.52615893863519 19.093550601620997 8 28.110858624830815 33.49990332199806 19.680448160191013 18.708789892980114 9 27.964067713627337 13.990726007446867 18.278439741222257 39.76676653770353 10 15.7669403807162 26.904068813450483 32.308103035689264 25.020887770144057 11 37.21863597095758 20.898502289228652 20.77468349041291 21.108178249400865 12 23.018411394167746 23.422773789440633 30.142161010560077 23.416653805831547 13 30.617213651288655 19.955581336356072 25.6285400557362 23.798664956619074 14 24.087634617465547 18.68838994761649 25.322629570696453 31.901345864221515 15 27.24563485516926 25.18736906339416 23.97916012537984 23.587835956056743 16 25.869259411026967 25.914937549558566 24.156018782141 24.059784257273467 17 22.897164762376114 25.74579539386973 27.063365778116005 24.293674065638154 18 25.0877641127709 24.396383355773274 28.077065671858897 22.43878685959693 19 25.741449318553126 26.66326076274509 24.387070337237706 23.208219581464075 20 25.355890351180626 23.139924112203246 27.878476638514744 23.625708898101387 21 24.938755816201812 24.52454822990561 25.0304668749235 25.506229078969078 22 24.368799081825067 25.613284444420792 24.807930079630744 25.209986394123398 23 23.478297118995542 25.304358315283814 25.43651448307425 25.78083008264639 24 24.745754593979 27.137249058498174 24.222806429353216 23.894189918169612 25 25.658341715050014 24.612090604139947 24.131272761460778 25.598294919349257 26 23.210348271415064 24.576080265802418 26.05401195968971 26.15955950309281 27 25.182224729345943 25.90589061726687 26.046118067788132 22.865766585599058 28 24.327289627780825 24.181474366138218 25.563969793889598 25.927266212191363 29 23.238996890338765 25.97285565530833 26.423605752429815 24.364541701923095 30 25.1124214380365 24.861058632990794 26.303778247272174 23.72274168170054 31 23.75387377223372 24.736530270858058 25.588094946667443 25.92150101024077 32 23.52104830884453 25.27934620835972 25.850189896882707 25.349415585913036 33 23.89179514197475 25.30604352816168 26.062260633249785 24.739900696613788 34 23.31163843491619 25.765485775916357 27.17121940229934 23.75165638686811 35 24.659808737207904 25.13078138886376 25.82012215132502 24.389287722603317 36 23.75981636501356 26.027758116960868 26.16993686660387 24.0424886514217 37 25.693997271729046 25.82411344498312 24.774669299146574 23.707219984141258 38 25.3035600565522 25.617896605981265 24.02501565474068 25.053527682725857 39 24.528273437319836 24.689610396521722 26.17490380982284 24.6072123563356 40 24.564815948145114 24.865493403722013 25.273758397238378 25.29593225089449 41 23.467653669240608 25.21105073909889 26.44693264647604 24.874362945184462 42 25.609293150762692 25.416469319369128 25.601754040519616 23.372483489348568 43 25.312873075087765 24.30192273919823 24.040803438543833 26.34440074717017 44 24.16550919150582 24.569428109705584 27.419477867833187 23.84558483095541 45 25.28032185792059 24.96394531395516 25.169363894225395 24.586368933898857 46 24.116925494898677 24.81921641079495 26.22415302456067 24.8397050697457 47 24.889263774841368 24.816977011922436 26.6245008665542 23.669258346681993 48 24.000447024889706 27.71279360399626 24.033353023715378 24.253406347398652 49 23.916452467240347 25.27757230006723 27.65150507249076 23.154470160201658 50 22.72941351774933 27.989331687142055 24.33631262023804 24.944942174870572 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 14.0 1 17.0 2 20.0 3 108.5 4 197.0 5 227.5 6 258.0 7 260.0 8 262.0 9 340.5 10 419.0 11 619.0 12 819.0 13 1475.0 14 2131.0 15 2957.5 16 3784.0 17 4374.5 18 4965.0 19 5315.5 20 5666.0 21 6096.0 22 6526.0 23 6695.5 24 6865.0 25 6522.5 26 6180.0 27 8085.0 28 9990.0 29 11250.0 30 12510.0 31 14328.0 32 16146.0 33 20108.0 34 24070.0 35 27820.0 36 31570.0 37 34212.0 38 36854.0 39 39464.0 40 42074.0 41 48647.0 42 55220.0 43 59602.0 44 63984.0 45 75701.5 46 87419.0 47 95908.5 48 104398.0 49 105875.0 50 107352.0 51 99237.0 52 91122.0 53 84398.0 54 77674.0 55 76159.0 56 74644.0 57 68217.0 58 61790.0 59 58872.5 60 55955.0 61 50009.5 62 44064.0 63 35826.5 64 27589.0 65 25609.0 66 23629.0 67 18486.0 68 13343.0 69 12027.5 70 10712.0 71 8532.0 72 6352.0 73 5307.0 74 4262.0 75 3808.0 76 3354.0 77 2509.0 78 1664.0 79 1246.0 80 828.0 81 585.5 82 343.0 83 275.0 84 207.0 85 167.0 86 127.0 87 97.5 88 68.0 89 42.0 90 16.0 91 13.5 92 11.0 93 7.0 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014812134242283944 2 0.0038139028288515543 3 5.321724877467284E-4 4 2.660862438733642E-4 5 8.869541462445474E-5 6 4.4347707312227376E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.869541462445474E-5 47 0.0 48 0.0 49 0.0 50 2.660862438733642E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1127454.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.658739491422075 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2054459317863 35.81874115660983 2 12.032432765667057 10.747065606599527 3 3.377289987034837 4.524765411539311 4 1.3075460724257975 2.3357343768598318 5 0.6997334884691885 1.562460778748474 6 0.396472243300497 1.0623570377481966 7 0.272202631315302 0.8509358480552777 8 0.18865330470852684 0.6740015031339176 9 0.15790067085023812 0.634648043251941 >10 1.014432539617043 9.200935521140854 >50 0.15120846360523355 4.766009261514482 >100 0.16696019412646765 15.486424195490695 >500 0.021343776234991358 6.354277341554333 >1k 0.007978981770090227 5.00992854916128 >5k 3.9894908850451134E-4 0.9717153685921024 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5782 0.5128368873585973 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 5126 0.454652695364955 No Hit GTTATAGCCTGTGGTGATGCGGCGCGTCTCGGGTGAGGTCCGCGCTTCGG 2721 0.24134022319314136 No Hit CAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAA 2518 0.22333505402437706 No Hit GGCTATAACACTCCCCGAGGGGAGCTACATTCCTAAGGTCTTATCCGGCG 2385 0.21153856387932457 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2051 0.18191429539475668 No Hit CATCAGGATCGGTCGATGGTGCAGGTTACCCTTCCCACCTCCGTTCACTT 1977 0.17535083471254703 No Hit CTCTACTTGTGCGCTATCGGTCTCTGGCCGGTATTTAGCTTTAGAAGAAA 1880 0.16674737949397492 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1866 0.16550564368923254 No Hit ATCCTGATGTCCTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCC 1655 0.1467909112034726 No Hit CTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGG 1543 0.13685702476553369 No Hit GTCTAACATCTATGCGAGTGTTCGGGTGTCAAACCCCTACGCGTAATGAA 1523 0.13508311647304458 No Hit GTTCTAAGTTGGTTGTTAAGCGCGCGCCGGACGGCCGAAGCCTGCCAAGG 1457 0.12922921910783056 No Hit CTATAACACTCCCCGAGGGGAGCTACATTCCTAAGGTCTTATCCGGCGGT 1445 0.1281648741323371 No Hit GTGTTATAGCCTGTGGTGATGCGGCGCGTCTCGGGTGAGGTCCGCGCTTC 1444 0.12807617871771265 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1391 0.12337532174261656 No Hit GGTTAAGGTTGTTTCAACCCCAAGGCCTCTAATCATTCGCTTTACCTCAT 1382 0.12257706301099645 No Hit GGTATGGGTAGCACGCTTAAGCGCCATCCATTTTCAGGGCTAGTTCATTC 1366 0.12115793637700518 No Hit ACCTAGAAGCATCCTCTACAAATTACAACTCGGGCTTGCGCCAGATTTCA 1366 0.12115793637700518 No Hit ATGTTAGACTCCTTGGTCCGTGTTTCAAGACGGGCCGCTGACAACCATTA 1320 0.11707794730428027 No Hit GTGCTGGAAGGCGCCGGCCGTGAAGCTAGTGCCGACCTGCTCCCCGGGAA 1280 0.11353013071930208 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1271 0.11273187198768198 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1263 0.11202230867068635 No Hit ATCCTAAGCCATAGGGAAATTCCGTTTTAAAGTGCACACTCCGTGCCGCC 1252 0.11104665910981736 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1202 0.10661188837859462 No Hit ACTAGAGGCTGTTCACCTTGGAGACCTGCTGCGGTTATGAGTACGACCTG 1191 0.10563623881772562 No Hit GCACAAAAGTGTGCCGCTCTACCAGTCGTTAAACCCTAGCTCCGGACAAA 1187 0.10528145715922779 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1169 0.1036849396959876 No Hit ATGTAGATAAGGGAAGTCGGCAAAATAGATCCGTAACTTCGGGAAAAGGA 1169 0.1036849396959876 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1153 0.10226581306199632 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1139 0.10102407725725394 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 8.869541462445474E-5 0.0 12 0.0 0.0 0.0 1.7739082924890948E-4 0.0 13 0.0 0.0 0.0 1.7739082924890948E-4 0.0 14 0.0 0.0 0.0 1.7739082924890948E-4 0.0 15 0.0 0.0 0.0 1.7739082924890948E-4 0.0 16 0.0 0.0 0.0 3.5478165849781897E-4 0.0 17 0.0 0.0 0.0 6.208679023711832E-4 0.0 18 0.0 0.0 0.0 0.001064344975493457 0.0 19 0.0 0.0 0.0 0.0012417358047423664 0.0 20 0.0 0.0 0.0 0.0018626037071135496 0.0 21 0.0 0.0 0.0 0.0023060807802358233 0.0 22 0.0 0.0 0.0 0.0039025982434760086 0.0 23 0.0 0.0 0.0 0.006297374438336287 0.0 24 0.0 0.0 0.0 0.010377363511061204 0.0 25 0.0 0.0 0.0 0.013038225949794847 0.0 26 0.0 0.0 0.0 0.015787783803152943 0.0 27 0.0 0.0 0.0 0.02039994536362459 0.0 28 0.0 0.0 0.0 0.03042252721618798 0.0 29 0.0 0.0 0.0 0.04230771277586491 0.0 30 0.0 0.0 0.0 0.0635059168711096 0.0 31 0.0 0.0 0.0 0.10918405540270379 0.0 32 0.0 0.0 0.0 0.16515086203073473 0.0 33 0.0 8.869541462445474E-5 0.0 0.21464290339118047 0.0 34 0.0 8.869541462445474E-5 0.0 0.282228809335015 0.0 35 0.0 1.7739082924890948E-4 0.0 0.3533625318638277 0.0 36 0.0 2.660862438733642E-4 0.0 0.4505727062922301 0.0 37 0.0 2.660862438733642E-4 0.0 0.5995810028613141 0.0 38 0.0 2.660862438733642E-4 0.0 0.781938775329193 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTAGG 30 1.3008094E-4 36.66796 2 CCCCGTA 50 0.0025804667 21.999802 7 ACGTCGC 50 0.0025804667 21.999802 8 TAGGACG 400 0.0 21.449806 4 TAGGACA 195 0.0 21.435703 4 AGAGTTA 595 0.0 21.07544 40 TGGTATA 445 0.0 20.763857 44 TGTAGGA 500 0.0 20.680729 2 GTCCTAC 480 0.0 20.632133 1 TCTATAC 75 5.4726E-5 20.533146 3 CCTTATA 120 1.4306352E-8 20.167377 2 GTAGGAC 535 0.0 20.149351 3 GCTATCG 410 0.0 19.853477 13 GTTATAT 100 1.1195807E-6 19.806849 1 ATACACT 335 0.0 19.701313 4 CGCTTCG 660 0.0 19.666489 43 ATTTCGT 280 0.0 19.64268 42 GATTTCG 295 0.0 19.389654 41 TATCGGT 420 0.0 19.380775 15 GCGCTAT 410 0.0 19.316898 11 >>END_MODULE