SRR4062475_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062475_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1047826
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	5386	0.514016640167356	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	4188	0.39968468047175776	No Hit
GTACATGGAAGCAGTGGTATCAACG	4010	0.3826971271947823	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3574	0.3410871652354494	No Hit
TCCATGTACTCTGCGTTGATACCAC	3420	0.3263900685800887	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	2888	0.2756182801342971	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	2101	0.20051039008384977	No Hit
GTACATGGGGTGGTATCAACGCAAA	1640	0.15651453581033492	No Hit
GAGTACATGGAAGCAGTGGTATCAA	1630	0.15556017888466214	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1514	0.14448963854685798	No Hit
CATGTACTCTGCGTTGATACCACTG	1355	0.12931536342866087	No Hit
GTACATGGGTGGTATCAACGCAAAA	1087	0.10373859782063052	No Hit
GCAGAGTACTTTTTTTTTTTTTTTT	1070	0.10211619104698681	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTATT	45	6.785927E-4	14.770238	2
AATTCCG	75	9.667583E-7	13.932878	5
TCGCGTA	55	1.9549718E-4	13.821692	9
TTCCGAT	70	7.248831E-6	13.57293	7
GTCTTAA	65	5.4777785E-5	13.146507	1
CGCGTAA	60	4.0829307E-4	12.66928	10
CGTCAAT	75	1.4758107E-5	12.668068	19
GTATAGA	60	4.1093442E-4	12.659599	1
GTTCTAG	100	1.4511716E-7	12.343108	1
TATACTG	85	3.941277E-6	12.2937155	5
CCGATAA	80	2.8568285E-5	11.878016	9
ATTCCGA	80	2.8610237E-5	11.876314	6
TAACGAA	80	2.8638235E-5	11.875179	13
TTAACCA	65	8.031428E-4	11.69025	4
CCCCTAT	65	8.0572156E-4	11.685784	1
CGAACCT	155	2.5465852E-11	11.645893	16
TCCGTCA	90	7.444758E-6	11.612396	17
TCCAGTA	90	7.49641E-6	11.605187	2
CCTATAC	75	2.0805834E-4	11.395272	3
CGATAAC	85	5.3076117E-5	11.178777	10