##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062474_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1978413 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21919336356969 32.0 32.0 32.0 32.0 32.0 2 30.920935113143717 32.0 32.0 32.0 32.0 32.0 3 30.89910802244021 32.0 32.0 32.0 32.0 32.0 4 30.973888161875198 32.0 32.0 32.0 32.0 32.0 5 30.794414007590934 32.0 32.0 32.0 32.0 32.0 6 34.440735579477085 36.0 36.0 36.0 32.0 36.0 7 34.33222689094744 36.0 36.0 36.0 32.0 36.0 8 34.348118416124436 36.0 36.0 36.0 32.0 36.0 9 34.48299419787476 36.0 36.0 36.0 32.0 36.0 10 34.18973793641671 36.0 36.0 36.0 32.0 36.0 11 34.461919730612365 36.0 36.0 36.0 32.0 36.0 12 34.264122304089184 36.0 36.0 36.0 32.0 36.0 13 34.37295953878184 36.0 36.0 36.0 32.0 36.0 14 34.28400440150767 36.0 36.0 36.0 32.0 36.0 15 34.22329008149461 36.0 36.0 36.0 32.0 36.0 16 34.233151015485646 36.0 36.0 36.0 32.0 36.0 17 34.15869436765731 36.0 36.0 36.0 32.0 36.0 18 34.1689030551255 36.0 36.0 36.0 32.0 36.0 19 34.15706275686624 36.0 36.0 36.0 32.0 36.0 20 34.1489850703569 36.0 36.0 36.0 32.0 36.0 21 34.13118191196681 36.0 36.0 36.0 32.0 36.0 22 34.08674225250238 36.0 36.0 36.0 32.0 36.0 23 34.051059611921275 36.0 36.0 36.0 32.0 36.0 24 34.02679319232132 36.0 36.0 36.0 32.0 36.0 25 33.58232583388807 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 10.0 4 65.0 5 173.0 6 364.0 7 88.0 8 257.0 9 328.0 10 257.0 11 68.0 12 160.0 13 113.0 14 266.0 15 396.0 16 555.0 17 823.0 18 1035.0 19 1461.0 20 2210.0 21 3331.0 22 4968.0 23 7396.0 24 10313.0 25 15000.0 26 21228.0 27 27794.0 28 38100.0 29 51229.0 30 65854.0 31 92047.0 32 132656.0 33 194955.0 34 446859.0 35 858054.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.347219624538354 17.270143732516182 11.105578746553785 26.277057896391675 2 17.07871858937064 19.880900810826795 36.58031360461314 26.46006699518943 3 19.338027528268793 23.45063765903565 28.07443651969085 29.136898293004705 4 13.07243630834063 15.180949222596762 35.33140490687136 36.41520956219125 5 15.168020338705379 35.96923103371733 33.19627224861924 15.666476378958055 6 34.57176074005262 34.68270997294032 16.844055644529583 13.901473642477475 7 30.551037253735693 30.157034591309483 20.61964126032297 18.672286894631853 8 28.332776005176324 32.41332872631208 19.53692353845539 19.71697173005621 9 27.448356463094413 14.522420605809168 18.516086272406692 39.513136658689724 10 16.176227985923948 26.43409668026569 31.342295667980014 26.04737966583035 11 37.48926551042023 21.087825709842637 21.979680250107915 19.443228529629216 12 25.018422245975447 23.541555323421758 28.329466686101124 23.110555744501667 13 29.540006467306956 19.353998015275597 25.050238020174152 26.0557574972433 14 23.685799319943058 19.62428346805762 24.78710897864435 31.90280823335498 15 25.472303901848836 26.730161718070434 22.135726997591863 25.661807382488867 16 25.97837037531796 25.53435232313787 23.55360170745814 24.933675594086033 17 24.342318343022782 25.47261380382504 24.95318901718191 25.231878835970267 18 25.095499817806388 24.70661767682902 25.885562168508848 24.312320336855745 19 25.667531436912093 24.889035772741213 25.069918850607987 24.373513939738707 20 25.83128293831811 24.231063914633395 24.781153437022088 25.15649971002641 21 26.707711773265007 24.1408996014424 24.18913139748213 24.962257227810465 22 25.904785431101864 24.399897544717884 24.511616323191745 25.18370070098851 23 24.726650800383464 24.168209596907996 25.139926647965915 25.965212954742622 24 24.889222255457653 24.93214151410844 24.914477809781644 25.26415842065226 25 24.99845638555339 24.490683148082727 25.039653177669518 25.471207288694366 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 214.0 1 214.0 2 583.5 3 953.0 4 953.0 5 953.0 6 2314.5 7 3676.0 8 3676.0 9 3676.0 10 3965.5 11 4255.0 12 4255.0 13 4255.0 14 4916.5 15 5578.0 16 5578.0 17 5578.0 18 8991.5 19 12405.0 20 12405.0 21 12405.0 22 20103.0 23 27801.0 24 27801.0 25 27801.0 26 40937.5 27 54074.0 28 54074.0 29 54074.0 30 67363.0 31 80652.0 32 80652.0 33 80652.0 34 100825.5 35 120999.0 36 120999.0 37 120999.0 38 137766.5 39 154534.0 40 154534.0 41 154534.0 42 177533.5 43 200533.0 44 200533.0 45 200533.0 46 227209.5 47 253886.0 48 253886.0 49 253886.0 50 258492.0 51 263098.0 52 263098.0 53 263098.0 54 247642.5 55 232187.0 56 232187.0 57 232187.0 58 214174.5 59 196162.0 60 196162.0 61 196162.0 62 173715.5 63 151269.0 64 151269.0 65 151269.0 66 125739.0 67 100209.0 68 100209.0 69 100209.0 70 76408.0 71 52607.0 72 52607.0 73 52607.0 74 41554.0 75 30501.0 76 30501.0 77 30501.0 78 24672.5 79 18844.0 80 18844.0 81 18844.0 82 13390.0 83 7936.0 84 7936.0 85 7936.0 86 5785.0 87 3634.0 88 3634.0 89 3634.0 90 2451.5 91 1269.0 92 1269.0 93 1269.0 94 776.0 95 283.0 96 283.0 97 283.0 98 568.5 99 854.0 100 854.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00783456234871081 2 0.003133824939484324 3 0.0041952817738257885 4 0.014607667863080157 5 0.035685167859289234 6 0.047108465219345 7 0.0641423201323485 8 0.08693836928891996 9 0.09517729614595133 10 0.11579988607029977 11 0.11655806952340082 12 0.1284362769553172 13 0.1172657074129618 14 0.12141044362324752 15 0.11099805753399315 16 0.10826859710282939 17 0.12034898678890606 18 0.12601008990539386 19 0.12894173259071792 20 0.11984353115350536 21 0.128284640264697 22 0.14744140884638343 23 0.13824211628209074 24 0.13192392083958204 25 0.1279308213199165 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1978413.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.38009939315637 #Duplication Level Percentage of deduplicated Percentage of total 1 79.9244127867529 44.26221924070033 2 12.298677126858298 13.622039233795025 3 3.5370814658307 5.876517694181862 4 1.390603947393135 3.0804713929258964 5 0.7419551077636704 2.054477380660605 6 0.4498616292735973 1.4948029045403446 7 0.3051572156184537 1.1829745852042168 8 0.22202015256312735 0.9836398492983786 9 0.15053533593978574 0.7502995679874767 >10 0.8129240015921697 8.254727947370208 >50 0.07735861427752935 3.0056488117783458 >100 0.07577795169266617 8.960003824226067 >500 0.01006585965653164 3.653364180954895 >1k 0.0035688047873157634 2.818813386376304 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3359 0.16978254793109426 No Hit TATCAACGCAGAGTACTTTTTTTTT 2125 0.10740932252264822 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0109112708013949E-4 2 0.0 0.0 0.0 0.0 1.0109112708013949E-4 3 0.0 0.0 0.0 0.0 1.0109112708013949E-4 4 0.0 0.0 0.0 0.0 1.0109112708013949E-4 5 0.0 0.0 0.0 0.0 1.5163669062020924E-4 6 0.0 0.0 0.0 0.0 2.0218225416027897E-4 7 0.0 0.0 0.0 0.0 2.0218225416027897E-4 8 0.0 0.0 0.0 0.0 2.5272781770034874E-4 9 0.0 0.0 0.0 5.0545563540069743E-5 2.5272781770034874E-4 10 0.0 0.0 0.0 1.5163669062020924E-4 2.5272781770034874E-4 11 0.0 0.0 0.0 1.5163669062020924E-4 2.5272781770034874E-4 12 0.0 0.0 0.0 1.5163669062020924E-4 3.538189447804882E-4 13 0.0 0.0 0.0 2.0218225416027897E-4 4.0436450832055795E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 225 0.0 12.244085 7 CGTCGTA 370 0.0 12.067519 10 CAAGACG 380 0.0 11.748763 4 CGAGCCG 430 0.0 11.710737 15 GCGTTAT 155 2.5465852E-11 11.638634 1 AAGGCGT 90 7.465753E-6 11.610771 6 AAGACGG 385 0.0 11.596476 5 CGCCAGT 380 0.0 11.503448 18 TTAATAC 100 1.9374183E-6 11.396493 3 ACCGTCG 360 0.0 11.347177 8 GATTAAA 255 0.0 11.170207 1 CGCGGTT 275 0.0 11.054502 10 GGTCCAA 430 0.0 11.046468 11 CCGTCGT 380 0.0 10.999957 9 CGGTCGG 225 0.0 10.977734 10 CGCATCG 390 0.0 10.962882 13 CGCAAGA 365 0.0 10.927592 2 ATACCGT 435 0.0 10.91922 6 GCATCGC 395 0.0 10.824111 14 CGGTCCA 405 0.0 10.79008 10 >>END_MODULE