##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062473_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1342546 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23250599979442 32.0 32.0 32.0 32.0 32.0 2 31.41683338969391 32.0 32.0 32.0 32.0 32.0 3 31.50999146397963 32.0 32.0 32.0 32.0 32.0 4 31.6115283945578 32.0 32.0 32.0 32.0 32.0 5 31.55724124164088 32.0 32.0 32.0 32.0 32.0 6 35.15652945969821 36.0 36.0 36.0 36.0 36.0 7 35.17087757142027 36.0 36.0 36.0 36.0 36.0 8 35.116168831459035 36.0 36.0 36.0 36.0 36.0 9 35.23673602245286 36.0 36.0 36.0 36.0 36.0 10 35.115353216947504 36.0 36.0 36.0 36.0 36.0 11 35.24089379432809 36.0 36.0 36.0 36.0 36.0 12 35.148993777494404 36.0 36.0 36.0 36.0 36.0 13 35.18975886114889 36.0 36.0 36.0 36.0 36.0 14 35.14980566773876 36.0 36.0 36.0 36.0 36.0 15 35.1119306154128 36.0 36.0 36.0 36.0 36.0 16 35.11815833498442 36.0 36.0 36.0 36.0 36.0 17 35.08717094237367 36.0 36.0 36.0 36.0 36.0 18 35.097843202393065 36.0 36.0 36.0 36.0 36.0 19 35.08079648667532 36.0 36.0 36.0 36.0 36.0 20 35.062075340435264 36.0 36.0 36.0 36.0 36.0 21 35.04874693306598 36.0 36.0 36.0 36.0 36.0 22 35.024925775355186 36.0 36.0 36.0 36.0 36.0 23 34.96597658478741 36.0 36.0 36.0 36.0 36.0 24 34.944549386017314 36.0 36.0 36.0 32.0 36.0 25 34.9120134431148 36.0 36.0 36.0 32.0 36.0 26 34.85750357902076 36.0 36.0 36.0 32.0 36.0 27 34.84584662276004 36.0 36.0 36.0 32.0 36.0 28 34.80704646246758 36.0 36.0 36.0 32.0 36.0 29 34.78282159419491 36.0 36.0 36.0 32.0 36.0 30 34.767616901022386 36.0 36.0 36.0 32.0 36.0 31 34.7520531884941 36.0 36.0 36.0 32.0 36.0 32 34.70090037883246 36.0 36.0 36.0 32.0 36.0 33 34.671407907066126 36.0 36.0 36.0 32.0 36.0 34 34.643957823419086 36.0 36.0 36.0 32.0 36.0 35 34.59168102992374 36.0 36.0 36.0 32.0 36.0 36 34.55670792658129 36.0 36.0 36.0 32.0 36.0 37 34.52431946465894 36.0 36.0 36.0 32.0 36.0 38 34.466906161874526 36.0 36.0 36.0 32.0 36.0 39 34.40681138672343 36.0 36.0 36.0 32.0 36.0 40 34.342478395526115 36.0 36.0 36.0 32.0 36.0 41 34.33492185742612 36.0 36.0 36.0 32.0 36.0 42 34.235602355524506 36.0 36.0 36.0 32.0 36.0 43 34.256680218033495 36.0 36.0 36.0 32.0 36.0 44 34.22892027535742 36.0 36.0 36.0 32.0 36.0 45 34.10909346867817 36.0 36.0 36.0 32.0 36.0 46 34.165652424572414 36.0 36.0 36.0 32.0 36.0 47 34.10255291066377 36.0 36.0 36.0 32.0 36.0 48 34.08641119186978 36.0 36.0 36.0 32.0 36.0 49 34.093263098620085 36.0 36.0 36.0 32.0 36.0 50 33.554995508533786 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 40.0 22 108.0 23 359.0 24 1114.0 25 2523.0 26 5473.0 27 10366.0 28 16882.0 29 24956.0 30 34459.0 31 47771.0 32 70147.0 33 103672.0 34 222499.0 35 802167.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.89777218226313 17.360961600780723 11.56990192536196 26.17136429159419 2 15.917216885562416 20.52765892784783 36.30163516315877 27.253489023430983 3 18.850299543924542 24.45772605827308 28.211801352807846 28.48017304499453 4 12.362211117260303 15.71525083367907 35.321326765697634 36.601211283362986 5 14.229754511204831 36.7585915119482 33.44391924001114 15.567734736835833 6 34.86081223711192 34.59534508867154 16.796607025941146 13.747235648275394 7 30.17788589739197 30.291773987632453 21.032128508073466 18.49821160690211 8 28.711046027473174 32.35129373593158 19.752023394356694 19.18563684223855 9 27.38468551543113 14.284203297317186 18.296728752683332 40.03438243456835 10 15.744041544945201 26.866714436600308 31.72122221510473 25.668021803349756 11 37.65636335738217 20.95041808623317 21.645440826608546 19.74777772977611 12 24.433799661240656 23.751737370637578 28.799013218169062 23.0154497499527 13 30.315311356184445 19.14742586101333 25.086961638558382 25.45030114424385 14 23.9600728764601 19.417286260582507 24.874305982811762 31.748334880145634 15 25.690069465031367 26.639683109554536 22.91846983269102 24.75177759272308 16 26.250869616385586 25.25105285033064 24.108000768688743 24.39007676459503 17 24.29034088962315 25.572308136927894 25.69774145541382 24.439609518035134 18 25.54631275203978 23.974820974476852 26.97010009340462 23.508766180078748 19 25.345574751256194 25.897734602762213 25.128152033524366 23.628538612457227 20 25.361291158738698 23.67397467200379 26.318800249674872 24.645933919582642 21 26.378611980520596 24.638112958513155 24.107702827314668 24.875572233651585 22 25.237943429871308 24.777996433641754 24.85017273151162 25.133887404975326 23 23.861156340266927 24.236041074197832 25.447694157220685 26.45510842831456 24 24.278721176034193 25.63003427815509 25.057390957181358 25.033853588629366 25 25.170981106047762 24.22903945190705 24.84868302464124 25.751296417403946 26 24.1526174894566 25.05582676496746 25.643069213270902 25.148486532305036 27 25.69967807434531 24.898141292737826 24.861345533039465 24.5408350998774 28 24.63997509210113 24.101892970520193 25.708392859537028 25.549739077841654 29 24.09705142319146 25.14625197199947 26.121265118662603 24.63543148614647 30 24.910356889074937 24.727346400048862 26.08439487362072 24.277901837255484 31 24.561765481406223 24.85017273151162 24.920635866480552 25.667425920601605 32 24.326317310542805 25.04055726954607 25.0383227092405 25.59480271067062 33 23.960221847147135 24.607797423700937 25.576777257539035 25.855203471612892 34 24.539494363694057 25.046665067714624 26.026743217737046 24.387097350854273 35 25.749955681220605 24.574353504460927 25.648953555408905 24.026737258909563 36 24.50649735651516 25.454621294167946 25.27228117323354 24.766600176083355 37 25.725822429920463 25.00927342526811 25.110126580392777 24.15477756441865 38 24.561095113314554 24.915496377777743 25.12636438527991 25.397044123627794 39 24.854865308153315 24.69382799546533 25.21611922422025 25.2351874721611 40 25.519870455090555 24.848087141893092 25.063200813975833 24.568841589040524 41 23.927671752029354 25.264758153538132 25.842243021840595 24.965327072591926 42 26.091098554537425 25.398459345154656 25.15690337612268 23.353538724185242 43 24.98655539549483 23.95873214027676 25.183792585133023 25.87091987909539 44 24.538079142167195 24.82313455181424 25.745858987327065 24.892927318691502 45 24.871103113040448 24.977617154272554 25.236602693687963 24.914677038999038 46 24.09760871896936 24.6582607348437 25.967566053701034 25.27656449248591 47 24.90439806159342 24.249150494657165 26.331984155477727 24.51446728827169 48 25.11332945016409 26.270980659135702 24.336149375887306 24.2795405148129 49 23.999028711120513 25.13835652558646 26.008196367200824 24.8544183960922 50 24.018320415091925 26.444457024191347 24.37376447436438 25.163458086352346 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 28.0 1 27.5 2 27.0 3 137.5 4 248.0 5 273.5 6 299.0 7 272.5 8 246.0 9 347.5 10 449.0 11 630.0 12 811.0 13 1463.5 14 2116.0 15 2878.5 16 3641.0 17 4190.5 18 4740.0 19 5163.0 20 5586.0 21 6269.0 22 6952.0 23 7501.0 24 8050.0 25 8466.5 26 8883.0 27 10538.0 28 12193.0 29 14028.0 30 15863.0 31 18063.0 32 20263.0 33 23357.5 34 26452.0 35 29871.5 36 33291.0 37 39768.5 38 46246.0 39 50088.0 40 53930.0 41 60403.5 42 66877.0 43 70479.5 44 74082.0 45 85380.0 46 96678.0 47 104724.0 48 112770.0 49 111714.5 50 110659.0 51 102838.5 52 95018.0 53 92215.0 54 89412.0 55 90357.5 56 91303.0 57 88410.0 58 85517.0 59 79003.5 60 72490.0 61 63799.0 62 55108.0 63 47894.0 64 40680.0 65 35272.0 66 29864.0 67 25994.5 68 22125.0 69 20371.5 70 18618.0 71 14527.0 72 10436.0 73 9418.5 74 8401.0 75 6017.5 76 3634.0 77 3386.0 78 3138.0 79 2692.5 80 2247.0 81 1749.5 82 1252.0 83 1117.5 84 983.0 85 780.0 86 577.0 87 408.5 88 240.0 89 157.0 90 74.0 91 47.5 92 21.0 93 19.5 94 18.0 95 12.0 96 6.0 97 4.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014971554047310112 2 0.0037242671759477883 3 3.724267175947789E-4 4 2.2345603055686734E-4 5 0.0 6 5.213974046326905E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.4897068703791154E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1342546.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.89091141910018 #Duplication Level Percentage of deduplicated Percentage of total 1 79.011214853143 44.160088104725084 2 13.245912171166054 14.806522076476458 3 3.6320905077226637 6.090025464998459 4 1.4649834841286895 3.2751704856752535 5 0.7081336238376937 1.9789116821399473 6 0.42543115357282435 1.4266640951558596 7 0.2766191731503949 1.082234839236142 8 0.20176323161365659 0.9021384724600217 9 0.13741349287212998 0.6912148822114833 >10 0.7306140254701968 7.569187175462335 >50 0.07498076507251514 2.9376000237930433 >100 0.07903522566587363 9.325024937912943 >500 0.009124589724311807 3.5388225701624867 >1k 0.002683702860091708 2.216395189590386 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3585 0.26702995651545647 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3189 0.23753376048194996 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1568 0.11679301863772265 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1481 0.11031279375157349 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1409 0.10494984901820868 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1381 0.10286425939967793 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1374 0.10234286199504523 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1373 0.10226837665152629 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1350 0.1005552137505903 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.448534351895577E-5 0.0 5 0.0 0.0 0.0 1.4897068703791154E-4 0.0 6 0.0 0.0 0.0 1.4897068703791154E-4 0.0 7 0.0 0.0 0.0 1.4897068703791154E-4 0.0 8 0.0 0.0 0.0 1.4897068703791154E-4 0.0 9 0.0 0.0 0.0 1.4897068703791154E-4 0.0 10 0.0 0.0 0.0 1.4897068703791154E-4 0.0 11 0.0 0.0 0.0 2.2345603055686734E-4 0.0 12 0.0 0.0 0.0 2.2345603055686734E-4 0.0 13 0.0 0.0 0.0 2.979413740758231E-4 7.448534351895577E-5 14 0.0 0.0 0.0 3.724267175947789E-4 7.448534351895577E-5 15 0.0 0.0 0.0 5.213974046326905E-4 7.448534351895577E-5 16 0.0 0.0 0.0 5.213974046326905E-4 1.4897068703791154E-4 17 0.0 0.0 0.0 5.213974046326905E-4 1.4897068703791154E-4 18 0.0 0.0 0.0 5.213974046326905E-4 1.4897068703791154E-4 19 0.0 0.0 0.0 5.213974046326905E-4 1.4897068703791154E-4 20 0.0 0.0 0.0 7.448534351895577E-4 2.979413740758231E-4 21 0.0 0.0 0.0 0.001042794809265381 2.979413740758231E-4 22 0.0 0.0 0.0 0.0017131629009359828 3.724267175947789E-4 23 0.0 0.0 0.0 0.0028304430537203196 3.724267175947789E-4 24 0.0 0.0 0.0 0.00580985679447855 3.724267175947789E-4 25 0.0 0.0 0.0 0.007820961069490356 3.724267175947789E-4 26 0.0 0.0 0.0 0.010874860153767544 4.4691206111373467E-4 27 0.0 0.0 0.0 0.013630817863968907 4.4691206111373467E-4 28 0.0 0.0 0.0 0.02026001343715597 4.4691206111373467E-4 29 0.0 0.0 0.0 0.03068796152980978 4.4691206111373467E-4 30 0.0 0.0 0.0 0.049458268096586634 4.4691206111373467E-4 31 0.0 0.0 0.0 0.0889355001616332 4.4691206111373467E-4 32 0.0 0.0 0.0 0.1407772992508264 4.4691206111373467E-4 33 0.0 0.0 0.0 0.18852240444647705 4.4691206111373467E-4 34 0.0 0.0 0.0 0.24446089742921284 4.4691206111373467E-4 35 0.0 0.0 0.0 0.3144771203370313 4.4691206111373467E-4 36 0.0 0.0 0.0 0.40155048691069056 4.4691206111373467E-4 37 0.0 0.0 0.0 0.5388269750161261 4.4691206111373467E-4 38 0.0 0.0 0.0 0.702322304040234 4.4691206111373467E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAACCG 65 4.9328647E-4 20.307503 5 GTAATAC 105 1.7931488E-6 18.856966 3 TCGTATA 95 1.5974529E-5 18.526142 44 TAACGCA 60 0.0074129174 18.333162 4 GATTTCG 135 5.527545E-8 17.925758 41 CGCAATA 450 0.0 17.599836 36 TAGGACG 250 0.0 17.599836 4 GATCGAA 75 0.0012910521 17.599834 11 TAGCGGC 440 0.0 17.499838 30 TCCTACA 415 0.0 16.96496 2 TTAACGG 105 3.775147E-5 16.761747 35 CTAGCGG 460 0.0 16.738976 29 TAGACCG 80 0.0019886289 16.499846 5 CGCTTTA 80 0.0019886289 16.499846 20 CAATACG 455 0.0 16.439407 38 TAATACC 135 1.0857693E-6 16.296144 4 ATTTCGT 135 1.0857693E-6 16.296144 42 CGAATTT 95 3.3468966E-4 16.210375 22 TGTAGGA 450 0.0 16.134384 2 GTATTAG 355 0.0 16.117928 1 >>END_MODULE