##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062472_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 827079 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.911819789887062 32.0 32.0 32.0 32.0 32.0 2 30.69624787958587 32.0 32.0 32.0 32.0 32.0 3 30.70678012620318 32.0 32.0 32.0 32.0 32.0 4 30.708172979848356 32.0 32.0 32.0 32.0 32.0 5 30.60452145441971 32.0 32.0 32.0 32.0 32.0 6 34.17897443895928 36.0 36.0 36.0 32.0 36.0 7 33.96209551929139 36.0 36.0 36.0 32.0 36.0 8 33.95514817810632 36.0 36.0 36.0 32.0 36.0 9 34.06606140404968 36.0 36.0 36.0 32.0 36.0 10 33.833515299022224 36.0 36.0 36.0 32.0 36.0 11 34.1669767942361 36.0 36.0 36.0 32.0 36.0 12 33.94745604712488 36.0 36.0 36.0 32.0 36.0 13 34.03282274123754 36.0 36.0 36.0 32.0 36.0 14 33.94271889384206 36.0 36.0 36.0 32.0 36.0 15 33.92719558832953 36.0 36.0 36.0 32.0 36.0 16 33.89596036170668 36.0 36.0 36.0 32.0 36.0 17 33.80670528450124 36.0 36.0 36.0 32.0 36.0 18 33.850186016087946 36.0 36.0 36.0 32.0 36.0 19 33.82992072099521 36.0 36.0 36.0 32.0 36.0 20 33.77507710871634 36.0 36.0 36.0 32.0 36.0 21 33.663737079529284 36.0 36.0 36.0 27.0 36.0 22 33.623196816749065 36.0 36.0 36.0 27.0 36.0 23 33.54109825059033 36.0 36.0 36.0 27.0 36.0 24 33.537238885281816 36.0 36.0 36.0 27.0 36.0 25 32.96393573044413 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 9.0 4 38.0 5 90.0 6 133.0 7 34.0 8 125.0 9 154.0 10 109.0 11 40.0 12 61.0 13 45.0 14 246.0 15 324.0 16 444.0 17 656.0 18 862.0 19 1241.0 20 1800.0 21 2611.0 22 3762.0 23 5155.0 24 6543.0 25 8561.0 26 11475.0 27 14088.0 28 18631.0 29 24699.0 30 31421.0 31 42784.0 32 61425.0 33 87117.0 34 183297.0 35 319099.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.08510527671337 16.642583955957054 12.131156659343103 24.14115410798647 2 13.859896886275042 21.538894961356537 38.69533569998356 25.905872452384866 3 19.46805281988593 27.275079591360484 27.856311144483257 25.40055644427033 4 12.018265083144582 16.61875871443031 35.11953205398745 36.24344414843766 5 12.832828159433365 38.49376737165237 33.88164658469384 14.791757884220432 6 32.54922169480372 34.287767277794714 18.902872737302037 14.260138290099533 7 27.910606495076244 31.483370296296563 22.28679145750227 18.31923175112492 8 28.677943292537556 32.76369308892173 21.073179468747238 17.48518414979348 9 27.455494112478352 15.422051004612467 18.38148526031814 38.740969622591045 10 15.47966215979014 28.397195882678368 32.37772540132749 23.745416556204006 11 36.088749216156735 21.918194606189882 21.26170317338492 20.731353004268467 12 23.245939548764763 24.547100023609033 30.50468851208601 21.70227191554019 13 31.47546222821054 20.593957046339643 24.923098154718886 23.007482570730932 14 24.415991942044705 19.927701158331075 25.3797747259133 30.27653217371092 15 25.703820002203127 26.62792231923777 26.072177789829066 21.596079888730042 16 24.930184250632184 25.61956559896284 27.103278888952104 22.346971261452868 17 23.052701539534326 25.710477477183 28.50311550805117 22.7337054752315 18 25.066860377130055 23.630981567238717 30.36411513665668 20.938042918974546 19 23.670561171983774 28.836612385737638 25.84236333918518 21.650463103093408 20 23.448558056651148 23.69491476179062 30.557553042353984 22.29897413920425 21 24.848481913474274 26.36959516885519 23.97484666587568 24.80707625179485 22 23.019206083944876 27.222504783356342 25.511153091622468 24.247136041076317 23 21.83115304328453 26.522489841188353 25.632050021552665 26.01430709397446 24 22.036375171318294 28.807382547085286 25.7605805692368 23.395661712359615 25 24.845207798088495 25.336281064379513 24.788666571422343 25.02984456610965 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 282.0 1 282.0 2 700.5 3 1119.0 4 1119.0 5 1119.0 6 3085.0 7 5051.0 8 5051.0 9 5051.0 10 4721.5 11 4392.0 12 4392.0 13 4392.0 14 3537.0 15 2682.0 16 2682.0 17 2682.0 18 4492.0 19 6302.0 20 6302.0 21 6302.0 22 10187.5 23 14073.0 24 14073.0 25 14073.0 26 21443.5 27 28814.0 28 28814.0 29 28814.0 30 36552.0 31 44290.0 32 44290.0 33 44290.0 34 48871.5 35 53453.0 36 53453.0 37 53453.0 38 58361.0 39 63269.0 40 63269.0 41 63269.0 42 77329.0 43 91389.0 44 91389.0 45 91389.0 46 128976.5 47 166564.0 48 166564.0 49 166564.0 50 138908.0 51 111252.0 52 111252.0 53 111252.0 54 90957.0 55 70662.0 56 70662.0 57 70662.0 58 63398.5 59 56135.0 60 56135.0 61 56135.0 62 49931.0 63 43727.0 64 43727.0 65 43727.0 66 36634.5 67 29542.0 68 29542.0 69 29542.0 70 22360.0 71 15178.0 72 15178.0 73 15178.0 74 11960.0 75 8742.0 76 8742.0 77 8742.0 78 7285.5 79 5829.0 80 5829.0 81 5829.0 82 4092.5 83 2356.0 84 2356.0 85 2356.0 86 1714.0 87 1072.0 88 1072.0 89 1072.0 90 748.5 91 425.0 92 425.0 93 425.0 94 256.5 95 88.0 96 88.0 97 88.0 98 239.5 99 391.0 100 391.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008221705544452222 2 0.003748130468794396 3 0.00507811224804402 4 0.01765248543367683 5 0.03639313777764881 6 0.04969295557014506 7 0.06964268225888941 8 0.09285690967851923 9 0.1015622449608804 10 0.12187469395305649 11 0.12344649060126059 12 0.13589995635241617 13 0.12405102777364677 14 0.1285246028493046 15 0.1184892857876938 16 0.11800565604978486 17 0.1269528062011005 18 0.13348180766287138 19 0.13650449352480234 20 0.12586463929080535 21 0.1336027150973486 22 0.1570587573859329 23 0.14448438420030008 24 0.13674630839375682 25 0.1369881232627113 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 827079.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.52280649454612 #Duplication Level Percentage of deduplicated Percentage of total 1 77.30138477952687 34.416745962993275 2 13.6684382005854 12.171144581746518 3 4.149454698464903 5.542361057929143 4 1.7022456401473813 3.031550129698666 5 0.814849736599022 1.8139698572365068 6 0.45239315982461187 1.208508786859648 7 0.3073161642572028 0.9577804679708714 8 0.22117937851583927 0.7878021336195745 9 0.15658196667638327 0.6274321742581273 >10 0.9630453234625651 8.332568224329014 >50 0.12433021480591144 3.8797259058211986 >100 0.11724109423890036 10.333464763642688 >500 0.011996763131396922 3.5800033990912548 >1k 0.008452264933484195 8.174974361839286 >5k 5.453074150634965E-4 1.4484622616376812 >10k+ 5.453074150634965E-4 3.693505931326524 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 16465 1.990740908667733 No Hit TCCATGTACTCTGCGTTGATACCAC 13961 1.6879886927367278 No Hit GAGTACATGGAAGCAGTGGTATCAA 6393 0.7729612286129861 No Hit CATGTACTCTGCGTTGATACCACTG 5539 0.6697062795694244 No Hit CCCATGTACTCTGCGTTGATACCAC 4346 0.5254637102380788 No Hit GTACATGGGAAGCAGTGGTATCAAC 4198 0.5075694099354475 No Hit GCTTCCATGTACTCTGCGTTGATAC 4154 0.5022494828184491 No Hit GTATCAACGCAGAGTACTTTTTTTT 4095 0.4951159441842919 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3947 0.47722164388166066 No Hit CATGGAAGCAGTGGTATCAACGCAG 3689 0.4460275257865331 No Hit GCGTTGATACCACTGCTTCCATGTA 3606 0.4359922087249223 No Hit TATCAACGCAGAGTACTTTTTTTTT 3083 0.3727576204933265 No Hit GTATCAACGCAGAGTACATGGAAGC 2920 0.35304970867353663 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2745 0.3318909076400199 No Hit ACTCTGCGTTGATACCACTGCTTCC 2362 0.2855833602352375 No Hit ACGCAGAGTACATGGAAGCAGTGGT 2240 0.2708326532290144 No Hit CAGTGGTATCAACGCAGAGTACATG 2188 0.264545466636198 No Hit GTACATGGGGTGGTATCAACGCAAA 1947 0.2354067749271835 No Hit GTATCAACGCAGAGTACATGGGAAG 1916 0.23165864445838913 No Hit TATCAACGCAGAGTACATGGAAGCA 1895 0.2291195883343671 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1672 0.20215723044594286 No Hit GGTATCAACGCAGAGTACTTTTTTT 1392 0.1683031487923161 No Hit GAGTACATGGGAAGCAGTGGTATCA 1329 0.16068598042025006 No Hit GGTATCAACGCAGAGTACATGGAAG 1323 0.15996053581338662 No Hit ATACCACTGCTTCCATGTACTCTGC 1278 0.1545197012619109 No Hit GTACATGGGTGGTATCAACGCAAAA 1197 0.14472619906925457 No Hit TATCAACGCAGAGTACATGGGAAGC 1172 0.1417035132073236 No Hit GCGTTGATACCACTGCTTCCCATGT 1163 0.14061534629702846 No Hit AAGCAGTGGTATCAACGCAGAGTAC 1160 0.14025262399359675 No Hit GTACTCTGCGTTGATACCACTGCTT 1107 0.13384452996630308 No Hit GCTTCCCATGTACTCTGCGTTGATA 1059 0.12804097311139565 No Hit GGTATCAACGCAGAGTACATGGGAA 1057 0.12779915824244117 No Hit AAAAAGTACTCTGCGTTGATACCAC 1040 0.12574373185632812 No Hit GTACATGGGAGTGGTATCAACGCAA 1038 0.12550191698737365 No Hit CCACTGCTTCCATGTACTCTGCGTT 1025 0.12393012033916953 No Hit GTGGTATCAACGCAGAGTACATGGA 906 0.10954213563637814 No Hit ACATGGAAGCAGTGGTATCAACGCA 901 0.10893759846399195 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 860 0.10398039365042518 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 858 0.10373857878147069 No Hit ACGCAGAGTACATGGGAAGCAGTGG 853 0.10313404160908451 No Hit GAAGCAGTGGTATCAACGCAGAGTA 848 0.10252950443669831 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.2090743447723857E-4 7 0.0 0.0 0.0 1.2090743447723857E-4 1.2090743447723857E-4 8 0.0 0.0 0.0 1.2090743447723857E-4 1.2090743447723857E-4 9 0.0 0.0 0.0 2.4181486895447714E-4 1.2090743447723857E-4 10 0.0 0.0 0.0 2.4181486895447714E-4 1.2090743447723857E-4 11 0.0 0.0 0.0 2.4181486895447714E-4 1.2090743447723857E-4 12 0.0 0.0 0.0 2.4181486895447714E-4 2.4181486895447714E-4 13 0.0 0.0 0.0 2.4181486895447714E-4 2.4181486895447714E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGACCGG 45 6.7531824E-4 14.779049 6 TTATACT 45 6.7624863E-4 14.776365 4 CAAGACG 135 0.0 14.776365 4 GCGTTAT 40 0.005294537 14.242605 1 GCGCAAG 135 0.0 14.066771 1 AGACGAT 95 4.8821676E-9 14.0012045 7 AAGACGA 110 1.8553692E-10 13.81937 6 GTTTTCG 55 1.9569753E-4 13.81937 15 TTCGTTC 70 7.2372004E-6 13.574239 18 AGGACCT 315 0.0 13.570952 5 GGACCTG 330 0.0 13.531467 6 AAGACGG 150 0.0 13.299534 5 TTTACAC 50 0.0015016434 13.296315 3 CGTTATT 50 0.0015030135 13.294705 2 TCGTTCT 65 5.435886E-5 13.15657 19 CGCAAGA 155 0.0 12.865845 2 CGCCACT 75 1.4734587E-5 12.669289 17 AGCCCCG 105 1.9841536E-8 12.668523 16 CGGTTCT 105 1.9876097E-8 12.666989 12 CGATCAG 105 1.9876097E-8 12.666989 10 >>END_MODULE