##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062472_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 827079 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.085734252713465 32.0 32.0 32.0 32.0 32.0 2 31.39522101274485 32.0 32.0 32.0 32.0 32.0 3 31.488463617139356 32.0 32.0 32.0 32.0 32.0 4 31.608778605187656 32.0 32.0 32.0 32.0 32.0 5 31.54113331374633 32.0 32.0 32.0 32.0 32.0 6 35.12196416545457 36.0 36.0 36.0 36.0 36.0 7 35.13154607963689 36.0 36.0 36.0 36.0 36.0 8 35.08875814764974 36.0 36.0 36.0 36.0 36.0 9 35.1656129583752 36.0 36.0 36.0 36.0 36.0 10 35.083071871006275 36.0 36.0 36.0 36.0 36.0 11 35.18823715751458 36.0 36.0 36.0 36.0 36.0 12 35.0867909836908 36.0 36.0 36.0 36.0 36.0 13 35.139165666157645 36.0 36.0 36.0 36.0 36.0 14 35.07408723955027 36.0 36.0 36.0 36.0 36.0 15 35.05838861825775 36.0 36.0 36.0 36.0 36.0 16 35.054060132103466 36.0 36.0 36.0 36.0 36.0 17 35.036977120686174 36.0 36.0 36.0 36.0 36.0 18 35.042920930165074 36.0 36.0 36.0 36.0 36.0 19 34.99335250925244 36.0 36.0 36.0 36.0 36.0 20 34.961362820238456 36.0 36.0 36.0 36.0 36.0 21 34.887797900805126 36.0 36.0 36.0 32.0 36.0 22 34.86319444696335 36.0 36.0 36.0 32.0 36.0 23 34.77276052227175 36.0 36.0 36.0 32.0 36.0 24 34.754185513113015 36.0 36.0 36.0 32.0 36.0 25 34.7191598384193 36.0 36.0 36.0 32.0 36.0 26 34.648600677807075 36.0 36.0 36.0 32.0 36.0 27 34.610684106355016 36.0 36.0 36.0 32.0 36.0 28 34.533576599091504 36.0 36.0 36.0 32.0 36.0 29 34.49609045810618 36.0 36.0 36.0 32.0 36.0 30 34.45741337889125 36.0 36.0 36.0 32.0 36.0 31 34.41735674584895 36.0 36.0 36.0 32.0 36.0 32 34.348651096207256 36.0 36.0 36.0 32.0 36.0 33 34.29041119409391 36.0 36.0 36.0 32.0 36.0 34 34.23217491920361 36.0 36.0 36.0 32.0 36.0 35 34.106101110051156 36.0 36.0 36.0 32.0 36.0 36 34.043512167519665 36.0 36.0 36.0 32.0 36.0 37 33.92717987036305 36.0 36.0 36.0 32.0 36.0 38 33.81519903177327 36.0 36.0 36.0 32.0 36.0 39 33.607139100376145 36.0 36.0 36.0 27.0 36.0 40 33.452298994412864 36.0 36.0 36.0 21.0 36.0 41 33.45877600567781 36.0 36.0 36.0 21.0 36.0 42 33.217160633990225 36.0 36.0 36.0 14.0 36.0 43 33.269466399219425 36.0 36.0 36.0 14.0 36.0 44 33.25195416640974 36.0 36.0 36.0 14.0 36.0 45 32.947862296104724 36.0 36.0 36.0 14.0 36.0 46 33.12754887985307 36.0 36.0 36.0 14.0 36.0 47 32.93423965546217 36.0 36.0 36.0 14.0 36.0 48 32.92573019022367 36.0 36.0 36.0 14.0 36.0 49 33.00358490543225 36.0 36.0 36.0 14.0 36.0 50 32.35255640634087 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 22.0 22 119.0 23 363.0 24 1047.0 25 2636.0 26 5518.0 27 10384.0 28 17089.0 29 23865.0 30 31370.0 31 41042.0 32 57633.0 33 71855.0 34 134659.0 35 429471.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.334212069726526 17.3885808608795 12.787549353342726 24.489657716051248 2 13.447489523054118 22.102668024095163 38.073692890669776 26.376149562180945 3 19.06112618429262 27.229057547311253 28.443939855587637 25.265876412808495 4 11.81120545921248 17.0391220185738 35.20147410344114 35.94819841877257 5 12.646313109146767 38.40733472860512 33.98030901522104 14.966043147027067 6 32.91031494235085 34.53024645980036 18.414237212721503 14.145201385127294 7 27.635449576158987 31.43411935256487 22.376822528440453 18.55360854283569 8 28.612537148854162 32.82084640142768 21.150363085464733 17.416253364253432 9 27.379609444805155 14.943675271648779 18.439351017254697 39.23736426629137 10 15.405420763917352 28.308420356459298 32.561702086499594 23.724456793123753 11 36.31817516827292 21.593705075331375 21.399285920691977 20.688833835703726 12 23.145672904281213 24.56693979656115 30.666961680806793 21.620425618350847 13 31.76322938921191 20.243410847089578 25.099295230564433 22.894064533134078 14 24.26829843340237 19.749503977250058 25.573252373715206 30.408945215632365 15 25.647852260787662 26.639655945804453 26.026050715832465 21.68644107757542 16 25.008735562140984 25.20593558777336 27.230893300398147 22.554435549687515 17 23.036614398382742 25.69343436358558 28.74574254696347 22.524208691068203 18 25.274127380818516 23.00094670521196 30.70758657879114 21.01733933517838 19 23.80074938427889 28.357992404594967 26.280802680276004 21.560455530850138 20 23.679962857236127 23.295356308164035 30.891486786631024 22.133194047968814 21 24.74866367058044 26.054463962934616 24.48907540875781 24.707796957727133 22 22.95971727005522 26.742185450241152 26.047572239169416 24.250525040534217 23 21.91011983135831 25.68654263982038 26.1209630518971 26.282374476924215 24 22.239834405177742 28.15208704368023 26.199431976872827 23.408646574269206 25 25.199527493746064 24.322706778917127 25.27461101055643 25.20315471678038 26 21.536878581127077 25.40893917026064 27.84933482774922 25.204847420863064 27 25.0394460504982 26.39276296460193 26.93479099336339 21.63299999153648 28 23.23417714631855 24.10942606449928 27.158711562015235 25.497685227166933 29 21.8894446600627 26.307523223295476 28.82808050984247 22.97495160679935 30 24.699937974486115 24.881299126201974 28.13491818798446 22.283844711327454 31 22.276590265258818 25.532627475730855 26.80505731616931 25.38572494284101 32 22.184216985318212 26.662144728617214 27.11736121942402 24.03627706664055 33 21.990885997589103 25.77698140080936 27.34382084419989 24.888311757401652 34 21.574964422987406 27.327740155414414 28.866045444268323 22.231249977329856 35 24.647464147922992 26.00876095270222 27.459287444125653 21.884487455249136 36 23.077602018670525 27.16125061813926 27.16294332222194 22.598204040968277 37 24.613610066269366 26.716553074131976 26.91834758227449 21.751489277324172 38 23.274681136868423 26.765036955357346 25.26106937789498 24.69921252987925 39 22.9587500105794 25.782059513057398 27.71367668626576 23.545513790097438 40 25.008614654706502 26.082151765429906 25.558622574143463 23.350611005720133 41 21.729484124249314 26.150706280778497 28.174213104189565 23.945596490782624 42 25.76150524919627 26.92620656551551 26.54595268408459 20.766335501203635 43 23.985737759029067 24.568390685774876 25.986997614496314 25.45887394069974 44 22.99949581599823 25.98784396653766 28.356178793077806 22.656481424386303 45 24.132761199353386 26.178273175839312 26.432299695675987 23.25666592913132 46 22.311411606388265 25.42332715496343 28.470073596355366 23.795187642292937 47 24.338182930530216 24.650245018915967 28.507796715912264 22.503775334641553 48 22.999979445736138 29.285594241904338 24.7706688236553 22.94375748870422 49 21.92317783428185 26.128942942572596 29.377483892107044 22.570395331038508 50 21.850875188464464 29.720256468850014 23.844155153256217 24.584713189429305 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 29.0 2 36.0 3 131.5 4 227.0 5 264.5 6 302.0 7 306.5 8 311.0 9 413.0 10 515.0 11 758.0 12 1001.0 13 1814.0 14 2627.0 15 3557.5 16 4488.0 17 5326.0 18 6164.0 19 6637.5 20 7111.0 21 7536.0 22 7961.0 23 8295.0 24 8629.0 25 8217.5 26 7806.0 27 9275.5 28 10745.0 29 12513.0 30 14281.0 31 16163.0 32 18045.0 33 21007.0 34 23969.0 35 26769.0 36 29569.0 37 32020.5 38 34472.0 39 34875.0 40 35278.0 41 37660.0 42 40042.0 43 43505.0 44 46968.0 45 57697.5 46 68427.0 47 77357.0 48 86287.0 49 80446.5 50 74606.0 51 62933.5 52 51261.0 53 46600.5 54 41940.0 55 41981.0 56 42022.0 57 40320.5 58 38619.0 59 35289.5 60 31960.0 61 28167.5 62 24375.0 63 21517.5 64 18660.0 65 16300.0 66 13940.0 67 12161.0 68 10382.0 69 9580.0 70 8778.0 71 6876.0 72 4974.0 73 4553.5 74 4133.0 75 3039.0 76 1945.0 77 1741.5 78 1538.0 79 1297.0 80 1056.0 81 834.0 82 612.0 83 543.0 84 474.0 85 400.0 86 326.0 87 225.0 88 124.0 89 84.5 90 45.0 91 28.5 92 12.0 93 8.5 94 5.0 95 3.0 96 1.0 97 3.5 98 6.0 99 4.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016201596219949967 2 0.0030226858619309643 3 3.6272230343171574E-4 4 0.0 5 0.0 6 8.463520413406699E-4 7 0.0 8 1.2090743447723857E-4 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 827079.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.506270678228475 #Duplication Level Percentage of deduplicated Percentage of total 1 78.50166475689078 41.218296584168556 2 13.004506386251165 13.656362647065093 3 3.9141235921368227 6.165480983903279 4 1.5891759785924133 3.337668163492475 5 0.78539543856527 2.061909274337702 6 0.4657794492678835 1.4673805103769408 7 0.29875094773167954 1.0980408688883798 8 0.20624667957716028 0.8663395187491387 9 0.15118666408886597 0.7144423116829561 >10 0.8684530067095781 8.65345225942933 >50 0.10909619636172076 3.9836090306401206 >100 0.09357641479542946 9.62250128048119 >500 0.009033366773390731 3.210216551588612 >1k 0.0025478726796743087 2.254910785081242 >5k 4.6324957812260165E-4 1.6893892301150708 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 7334 0.8867351244560676 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 6557 0.7927900478672534 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2616 0.31629384859245613 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2414 0.2918705468280539 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1661 0.20082724866669327 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1653 0.19985998919087536 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1638 0.19804637767371677 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1613 0.1950236918117858 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1610 0.1946609695083541 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1559 0.18849469035001493 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1505 0.18196568888824405 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1252 0.1513761079655027 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1020 0.12332558316678335 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATA 997 0.12054471217380686 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGC 938 0.11341117353964977 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 888 0.10736580181578785 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATG 861 0.10410130108490241 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 841 0.10168315239535765 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGACTGTCTCTTATA 828 0.10011135574715353 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.2090743447723857E-4 0.0 4 0.0 0.0 0.0 1.2090743447723857E-4 0.0 5 0.0 0.0 0.0 1.2090743447723857E-4 0.0 6 0.0 0.0 0.0 1.2090743447723857E-4 0.0 7 0.0 0.0 0.0 1.2090743447723857E-4 0.0 8 0.0 0.0 0.0 2.4181486895447714E-4 0.0 9 0.0 0.0 0.0 2.4181486895447714E-4 0.0 10 0.0 0.0 0.0 2.4181486895447714E-4 1.2090743447723857E-4 11 0.0 0.0 0.0 2.4181486895447714E-4 1.2090743447723857E-4 12 0.0 0.0 0.0 2.4181486895447714E-4 4.836297379089543E-4 13 0.0 0.0 0.0 3.6272230343171574E-4 8.4635204134067E-4 14 0.0 0.0 0.0 3.6272230343171574E-4 8.4635204134067E-4 15 0.0 0.0 0.0 4.836297379089543E-4 9.672594758179086E-4 16 0.0 0.0 0.0 4.836297379089543E-4 0.0010881669102951472 17 0.0 0.0 0.0 6.045371723861928E-4 0.0012090743447723856 18 0.0 0.0 0.0 7.254446068634315E-4 0.0013299817792496243 19 0.0 0.0 0.0 8.4635204134067E-4 0.0013299817792496243 20 0.0 0.0 0.0 0.0010881669102951472 0.001450889213726863 21 0.0 0.0 0.0 0.002297241255067533 0.001450889213726863 22 0.0 0.0 0.0 0.004473575075657827 0.00169270408268134 23 0.0 0.0 0.0 0.008705335282361178 0.00169270408268134 24 0.0 0.0 0.0 0.014508892137268628 0.00169270408268134 25 0.0 0.0 0.0 0.018136115171585785 0.00169270408268134 26 0.0 0.0 0.0 0.02357694972306152 0.0019345189516358171 27 0.0 0.0 0.0 0.031919562701990985 0.0019345189516358171 28 0.0 0.0 0.0 0.0454611953634417 0.0019345189516358171 29 0.0 0.0 0.0 0.06311368079711853 0.0019345189516358171 30 0.0 0.0 0.0 0.09926500370581287 0.0019345189516358171 31 0.0 0.0 0.0 0.1635877588477038 0.0019345189516358171 32 0.0 0.0 0.0 0.24846477785072527 0.0019345189516358171 33 0.0 0.0 0.0 0.31641475602693336 0.0019345189516358171 34 0.0 0.0 0.0 0.41241525900186077 0.0021763338205902944 35 0.0 0.0 0.0 0.5067230578941069 0.0021763338205902944 36 0.0 0.0 0.0 0.6455247926739768 0.0021763338205902944 37 0.0 0.0 0.0 0.8474402082509651 0.0021763338205902944 38 0.0 0.0 0.0 1.069426257951175 0.0021763338205902944 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAGGAC 635 0.0 24.944641 3 TCTAGGT 45 0.0013979191 24.44421 3 CGATCAT 45 0.0013979191 24.44421 43 CTATACT 65 1.8126275E-5 23.692081 4 CTATAGC 75 2.0566295E-6 23.474955 1 TGTAGGA 705 0.0 23.093374 2 CTATTCG 50 0.002579899 21.999788 38 ATAACGC 200 0.0 21.999788 3 TAACGCC 190 0.0 21.999786 4 CTGTAGG 685 0.0 21.52585 1 AACGCCG 205 0.0 21.46321 5 GTCGTAT 145 1.2732926E-11 21.241175 43 CCTATAC 85 6.1100945E-6 20.705683 3 AACCTAT 75 5.4703632E-5 20.533136 6 ACGCCGC 215 0.0 20.46492 6 AATAACG 205 0.0 20.391281 2 TATTAGC 130 1.6207196E-9 20.308725 2 ATACACT 455 0.0 20.307497 4 TAGGACC 635 0.0 20.094296 4 GATATAC 440 0.0 20.007065 1 >>END_MODULE