##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062470_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1975809 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.395440045065083 32.0 32.0 32.0 32.0 32.0 2 31.54664545004097 32.0 32.0 32.0 32.0 32.0 3 31.59867426456707 32.0 32.0 32.0 32.0 32.0 4 31.673808551332645 32.0 32.0 32.0 32.0 32.0 5 31.644358842377983 32.0 32.0 32.0 32.0 32.0 6 35.27264679936168 36.0 36.0 36.0 36.0 36.0 7 35.294868076823214 36.0 36.0 36.0 36.0 36.0 8 35.23377259644024 36.0 36.0 36.0 36.0 36.0 9 35.349827842671026 36.0 36.0 36.0 36.0 36.0 10 35.25633499999241 36.0 36.0 36.0 36.0 36.0 11 35.34641303891216 36.0 36.0 36.0 36.0 36.0 12 35.29686422118737 36.0 36.0 36.0 36.0 36.0 13 35.311110031384615 36.0 36.0 36.0 36.0 36.0 14 35.29219575373936 36.0 36.0 36.0 36.0 36.0 15 35.24772030089953 36.0 36.0 36.0 36.0 36.0 16 35.28722614382261 36.0 36.0 36.0 36.0 36.0 17 35.28321664695322 36.0 36.0 36.0 36.0 36.0 18 35.292469059509294 36.0 36.0 36.0 36.0 36.0 19 35.25292981254767 36.0 36.0 36.0 36.0 36.0 20 35.23325635220813 36.0 36.0 36.0 36.0 36.0 21 35.21994990406461 36.0 36.0 36.0 36.0 36.0 22 35.19927432256863 36.0 36.0 36.0 36.0 36.0 23 35.186505881894455 36.0 36.0 36.0 36.0 36.0 24 35.17336999679625 36.0 36.0 36.0 36.0 36.0 25 35.12792380235134 36.0 36.0 36.0 36.0 36.0 26 35.11150672964846 36.0 36.0 36.0 36.0 36.0 27 35.05805571287508 36.0 36.0 36.0 36.0 36.0 28 35.02657645551771 36.0 36.0 36.0 36.0 36.0 29 34.99886021371499 36.0 36.0 36.0 36.0 36.0 30 34.95604534648845 36.0 36.0 36.0 36.0 36.0 31 34.94979980352352 36.0 36.0 36.0 36.0 36.0 32 34.91582739019814 36.0 36.0 36.0 36.0 36.0 33 34.943298162929715 36.0 36.0 36.0 36.0 36.0 34 34.9128736633956 36.0 36.0 36.0 36.0 36.0 35 34.907697049664215 36.0 36.0 36.0 36.0 36.0 36 34.8444439720641 36.0 36.0 36.0 36.0 36.0 37 34.779709475966555 36.0 36.0 36.0 36.0 36.0 38 34.73996018845951 36.0 36.0 36.0 32.0 36.0 39 34.60383923749715 36.0 36.0 36.0 32.0 36.0 40 34.67924278105829 36.0 36.0 36.0 32.0 36.0 41 34.63799537303454 36.0 36.0 36.0 32.0 36.0 42 34.639668105570934 36.0 36.0 36.0 32.0 36.0 43 34.61730207727569 36.0 36.0 36.0 32.0 36.0 44 34.553058013198644 36.0 36.0 36.0 32.0 36.0 45 34.541395954770934 36.0 36.0 36.0 32.0 36.0 46 34.412933132706655 36.0 36.0 36.0 32.0 36.0 47 34.44441593291659 36.0 36.0 36.0 32.0 36.0 48 34.38842418472636 36.0 36.0 36.0 32.0 36.0 49 34.34259232547276 36.0 36.0 36.0 32.0 36.0 50 33.94827334018622 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 7.0 21 24.0 22 89.0 23 303.0 24 879.0 25 2113.0 26 4779.0 27 9490.0 28 17102.0 29 26702.0 30 39804.0 31 58468.0 32 85991.0 33 141192.0 34 308307.0 35 1280556.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.76048583168101 21.22456149053986 12.801069501933435 26.213883175845698 2 11.815496029546711 21.43538630746579 46.41819003613368 20.330927626853818 3 18.426326982819095 26.73223679748638 31.03394172886095 23.807494490833577 4 10.857577832675123 17.97314416525079 40.33856511434051 30.83071288773358 5 10.549006051704444 40.571270372055565 36.75141347307708 12.12831010316291 6 29.382254663685252 39.56345739797287 19.028767110807888 12.02552082753399 7 26.00657553770407 32.59967567698886 23.460073043534592 17.933675741772483 8 22.29623409955112 43.14966679471548 20.60492689323715 13.949172212496249 9 26.42168347244091 14.923152997076134 21.501622879539468 37.15354065094349 10 15.357911619999706 29.8572888371295 35.150310581640234 19.634488961230563 11 33.49488741067583 20.445852812695964 29.125942841641066 16.933316934987136 12 25.486319780909998 23.59970017344794 34.35337120136612 16.56060884427594 13 29.943481379019936 23.39735267933287 26.85173516265995 19.80743077898724 14 18.588790718131154 25.710076227003725 27.548513039468897 28.152620015396224 15 20.082103077777255 39.32374030080843 22.178408945399074 18.415747676015243 16 18.49480390057946 28.333558557532633 34.04124588965836 19.13039165222954 17 18.378294663097495 32.09854798717892 30.596024210842245 18.927133138881338 18 18.77671374105493 27.356136144738684 37.01800123392494 16.849148880281444 19 24.495029630900557 25.585873938219738 27.537125299054715 22.38197113182499 20 24.06462365542418 29.30627403762206 29.569507983818273 17.059594323135485 21 20.992059455139643 26.82167152796652 27.106365038321012 25.079903978572826 22 23.129816697869078 32.4747483182838 27.347127176766577 17.048307807080544 23 18.555184230864423 32.074254140962005 30.343418822365926 19.027142805807646 24 23.92645240506547 27.624988042872566 30.648559653286323 17.79999989877564 25 20.868312675972224 30.21309245984809 30.694313063661514 18.224281800518167 26 16.95057568823707 32.04257091652078 31.934210239957405 19.072643155284748 27 18.860122613066345 31.347665690357722 30.258947094582524 19.533264601993412 28 17.674684142040046 32.16323035273147 28.238103986772 21.92398151845649 29 20.67350639662032 28.707633177093534 27.230111817488435 23.388748608797712 30 18.143555374026537 29.42414980395372 30.362550226261746 22.06974459575799 31 22.634576520301305 27.176867804529685 29.139911803215796 21.04864387195321 32 19.305054284093252 30.8528304102269 29.660862968029804 20.181252337650047 33 18.00543473584744 31.198157311764447 32.7213308573855 18.075077095002605 34 19.75378186859155 30.73237342273469 31.89063315330581 17.623211555367956 35 18.500320628157883 31.801606329356737 31.151239821258024 18.546833221227356 36 17.5745732507545 30.311330700487748 32.42469287264103 19.68940317611672 37 18.54106343275084 30.338155155685598 27.759717665017213 23.36106374654635 38 20.02966885969241 32.787025466530416 27.880124040329807 19.303181633447362 39 22.833279937483837 27.36337368642414 29.225345162411955 20.578001213680068 40 23.967448270556517 27.58287870942991 30.677357983489294 17.77231503652428 41 23.00338747318187 25.88413151271201 32.48785687280502 18.62462414130111 42 20.60963382594168 31.215365452834764 30.81527617294992 17.359724548273643 43 17.64219112272492 31.78146268186854 31.577546210185297 18.998799985221243 44 17.28623566346747 31.1677900039933 30.346658001861513 21.19931633067771 45 17.861291248293735 31.634383687896957 29.847217013385404 20.657108050423904 46 19.343751360204394 27.343119719243692 30.49337839848649 22.819750522065426 47 22.72577966797398 27.596493385747305 29.60367120506081 20.0740557412179 48 18.04921427121751 29.36655314354778 29.242705140021126 23.34152744521358 49 21.185397981282602 27.96327985144313 29.615109557654613 21.236212609619653 50 18.32343106039096 32.79456668129359 27.88214852751455 20.9998537308009 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 18.0 1 19.0 2 20.0 3 92.5 4 165.0 5 180.0 6 195.0 7 206.0 8 217.0 9 306.0 10 395.0 11 574.0 12 753.0 13 1366.0 14 1979.0 15 2695.0 16 3411.0 17 4143.0 18 4875.0 19 5713.0 20 6551.0 21 7861.5 22 9172.0 23 11277.5 24 13383.0 25 18187.0 26 22991.0 27 35383.5 28 47776.0 29 64039.5 30 80303.0 31 100798.0 32 121293.0 33 154205.0 34 187117.0 35 220220.0 36 253323.0 37 246506.0 38 239689.0 39 211836.0 40 183983.0 41 161726.0 42 139469.0 43 120393.0 44 101317.0 45 96806.5 46 92296.0 47 88019.0 48 83742.0 49 80126.5 50 76511.0 51 68685.0 52 60859.0 53 57182.5 54 53506.0 55 48544.0 56 43582.0 57 42900.0 58 42218.0 59 37177.5 60 32137.0 61 27964.5 62 23792.0 63 19149.0 64 14506.0 65 11913.0 66 9320.0 67 8298.0 68 7276.0 69 6804.0 70 6332.0 71 5075.0 72 3818.0 73 3357.5 74 2897.0 75 2120.0 76 1343.0 77 1257.0 78 1171.0 79 1016.5 80 862.0 81 665.0 82 468.0 83 416.5 84 365.0 85 303.5 86 242.0 87 175.5 88 109.0 89 71.5 90 34.0 91 24.5 92 15.0 93 10.5 94 6.0 95 5.0 96 4.0 97 2.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01568977568175871 2 0.004555096165671885 3 5.567339758043414E-4 4 0.0 5 1.0122435923715298E-4 6 5.567339758043414E-4 7 5.061217961857649E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.5183653885572946E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1975809.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.11744204687283 #Duplication Level Percentage of deduplicated Percentage of total 1 83.28667843654495 46.73835350439345 2 10.698357003644182 12.007288582975171 3 2.4859255431600893 4.185113478033816 4 1.008681832349773 2.264185770824876 5 0.5049164462276515 1.416730970484661 6 0.3393899923153483 1.1427418935027105 7 0.24253157087558863 0.9527175961203513 8 0.1735438763630157 0.7791070739512959 9 0.13334974487738982 0.6734921922109981 >10 0.9178879097801292 10.082467561466824 >50 0.11835815714649871 4.663955032291091 >100 0.08211454452822278 9.108029404539568 >500 0.004722824106935915 1.7772488498257393 >1k 0.003178823918129942 2.8670943375178464 >5k 3.632941620719934E-4 1.3414737518615847 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 7978 0.4037839689970032 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 6567 0.3323701835551918 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 6034 0.3053938918184906 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 5741 0.29056452319024767 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 4052 0.20508055181447196 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 3292 0.16661529530435382 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 2519 0.1274920804591942 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 2356 0.11924229518136623 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2010 0.10173048103333876 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 2006 0.10152803231486444 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 5.061217961857649E-5 0.0 18 0.0 0.0 0.0 1.0122435923715298E-4 0.0 19 0.0 0.0 0.0 1.518365388557295E-4 0.0 20 0.0 0.0 0.0 5.061217961857649E-4 0.0 21 0.0 0.0 0.0 7.591826942786473E-4 0.0 22 0.0 0.0 0.0 0.0010122435923715298 0.0 23 0.0 0.0 0.0 0.0015183653885572947 0.0 24 0.0 0.0 0.0 0.002783669879021707 0.0 25 0.0 0.0 0.0 0.0035428525733003547 0.0 26 0.0 0.0 0.0 0.0043020352675790016 0.0 27 0.0 0.0 0.0 0.006174685913466332 0.0 28 0.0 0.0 0.0 0.010426109001426757 0.0 29 0.0 0.0 0.0 0.01832160902192469 0.0 30 0.0 0.0 0.0 0.03547913791262212 0.0 31 0.0 0.0 0.0 0.08108071174895955 0.0 32 0.0 0.0 0.0 0.14242267344667425 0.0 33 0.0 0.0 0.0 0.21246993003878412 0.0 34 0.0 0.0 0.0 0.2888943212628346 0.0 35 0.0 0.0 0.0 0.3755423727698376 0.0 36 0.0 0.0 0.0 0.49675854295632826 0.0 37 0.0 0.0 0.0 0.6965754280904682 0.0 38 0.0 0.0 0.0 0.9371857299971809 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACC 2815 0.0 26.02533 4 TGTAGGA 9245 0.0 21.488754 2 CTGTAGG 9020 0.0 21.321232 1 CAGAGCG 155 1.8189894E-12 21.290163 14 GCGATAA 115 8.780262E-9 21.043322 20 GGCGATA 105 7.7530785E-8 20.952225 19 TTAGGAC 5975 0.0 20.91418 3 AGGACCT 5900 0.0 20.84444 5 ACTGTTC 1755 0.0 20.432896 8 GTAGGAC 9455 0.0 20.38323 3 GTATCAA 3700 0.0 20.220158 1 GGACCTG 5985 0.0 20.107292 6 TATAGGA 615 0.0 20.032877 2 GATATAC 2120 0.0 19.928413 1 TACGGCG 100 1.1242555E-6 19.799852 16 TAGGACG 10985 0.0 19.767307 4 TAGGACA 2060 0.0 19.757633 4 CTAGGAC 470 0.0 19.659925 3 TTTAGGA 6515 0.0 19.653458 2 CTTTAGG 6275 0.0 19.60223 1 >>END_MODULE