##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062468_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2117776 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.266701483065255 32.0 32.0 32.0 32.0 32.0 2 31.403214504272405 32.0 32.0 32.0 32.0 32.0 3 31.484231571233217 32.0 32.0 32.0 32.0 32.0 4 31.58865526854587 32.0 32.0 32.0 32.0 32.0 5 31.521777562877283 32.0 32.0 32.0 32.0 32.0 6 35.100201815489456 36.0 36.0 36.0 36.0 36.0 7 35.11505182795536 36.0 36.0 36.0 36.0 36.0 8 35.060404877569674 36.0 36.0 36.0 36.0 36.0 9 35.1808047687763 36.0 36.0 36.0 36.0 36.0 10 35.05743430844433 36.0 36.0 36.0 36.0 36.0 11 35.18976888962761 36.0 36.0 36.0 36.0 36.0 12 35.093154800129945 36.0 36.0 36.0 36.0 36.0 13 35.14366533571067 36.0 36.0 36.0 36.0 36.0 14 35.09955443824087 36.0 36.0 36.0 36.0 36.0 15 35.06748872401992 36.0 36.0 36.0 36.0 36.0 16 35.0728542584296 36.0 36.0 36.0 36.0 36.0 17 35.043096625894336 36.0 36.0 36.0 36.0 36.0 18 35.06058997741027 36.0 36.0 36.0 36.0 36.0 19 35.03875952886424 36.0 36.0 36.0 36.0 36.0 20 35.02645841675418 36.0 36.0 36.0 36.0 36.0 21 35.0248052674126 36.0 36.0 36.0 36.0 36.0 22 35.002416686184 36.0 36.0 36.0 36.0 36.0 23 34.95730615513633 36.0 36.0 36.0 32.0 36.0 24 34.9311258603365 36.0 36.0 36.0 32.0 36.0 25 34.9015018585535 36.0 36.0 36.0 32.0 36.0 26 34.858234770816175 36.0 36.0 36.0 32.0 36.0 27 34.84609750984051 36.0 36.0 36.0 32.0 36.0 28 34.824087155582085 36.0 36.0 36.0 32.0 36.0 29 34.79365145322262 36.0 36.0 36.0 32.0 36.0 30 34.785703964914134 36.0 36.0 36.0 32.0 36.0 31 34.78076529340213 36.0 36.0 36.0 32.0 36.0 32 34.73709070269943 36.0 36.0 36.0 32.0 36.0 33 34.71228118554559 36.0 36.0 36.0 32.0 36.0 34 34.694998904511145 36.0 36.0 36.0 32.0 36.0 35 34.653932710541625 36.0 36.0 36.0 32.0 36.0 36 34.6295510006724 36.0 36.0 36.0 32.0 36.0 37 34.61412396778507 36.0 36.0 36.0 32.0 36.0 38 34.57022791834453 36.0 36.0 36.0 32.0 36.0 39 34.54286477890013 36.0 36.0 36.0 32.0 36.0 40 34.518224307008865 36.0 36.0 36.0 32.0 36.0 41 34.486779527202124 36.0 36.0 36.0 32.0 36.0 42 34.43706416542637 36.0 36.0 36.0 32.0 36.0 43 34.44276495720038 36.0 36.0 36.0 32.0 36.0 44 34.40640133800742 36.0 36.0 36.0 32.0 36.0 45 34.33561245381948 36.0 36.0 36.0 32.0 36.0 46 34.365519299491545 36.0 36.0 36.0 32.0 36.0 47 34.31087140471891 36.0 36.0 36.0 32.0 36.0 48 34.277041575690724 36.0 36.0 36.0 32.0 36.0 49 34.28405270434644 36.0 36.0 36.0 32.0 36.0 50 33.74059532264035 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 14.0 21 60.0 22 196.0 23 554.0 24 1545.0 25 3657.0 26 7670.0 27 14249.0 28 24173.0 29 36199.0 30 50977.0 31 72311.0 32 106063.0 33 169424.0 34 366304.0 35 1264375.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.924915417208986 18.056229846060265 11.733016852330065 26.285837884400685 2 16.173062320795133 20.603743327628997 36.40819610820857 26.814998243367295 3 18.254742506476177 24.23827606690459 28.895787156441564 28.61119427017767 4 12.211223771386264 15.650733105011728 36.05712226947836 36.08092085412365 5 14.330788525320903 36.65774850597986 33.35900491836719 15.652458050332047 6 34.41603238889338 35.40745588623467 16.648557935897454 13.527953788974498 7 30.12172214787791 30.678863750334077 20.915923984334494 18.283490117453518 8 28.391718482030203 32.29184767416384 19.700808772976934 19.615625070829022 9 27.32814990820559 14.201029759521308 18.894113447314542 39.57670688495856 10 15.968686017784695 26.258915012730338 31.370314896381863 26.402084073103104 11 37.41382469156322 21.140007252891714 22.091807632157508 19.354360423387554 12 24.4411590272059 24.043194369942807 28.408056376122875 23.107590226728416 13 29.28548628372406 19.149334018328663 25.679958598076475 25.885221099870808 14 23.824663231616565 19.729659794048096 24.8657081768799 31.579968797455443 15 25.441170359849202 26.82176963002697 22.625480692953364 25.111579317170467 16 26.248290659635394 25.717120224235234 23.584411193629542 24.45017792249983 17 24.071573197543085 25.763725719811724 25.366894326878764 24.797806755766427 18 25.37605488021396 24.251809445380438 26.542750508080175 23.82938516632543 19 25.45014203579604 25.450236474490218 25.36698876557294 23.7326327241408 20 25.375252151313454 24.040408428464577 25.567529332658413 25.016810087563556 21 26.871208286428782 24.331940677389866 24.286610104184767 24.510240931996584 22 25.441075921155022 24.392098125580798 25.02823716955901 25.138588783705167 23 23.95701906150603 24.046074750115213 25.57739817619994 26.419508012178817 24 24.388509455202062 25.484139965699864 25.108746156345145 25.018604422752926 25 24.94536721541844 24.263378185417157 25.2394965284336 25.551758070730806 26 24.298131624874397 25.16583434697532 25.86911930251358 24.666914725636705 27 25.622728749405038 24.725655593414977 24.8968729459584 24.754742711221585 28 24.377649005371673 24.279338324733114 26.013610504604827 25.329402165290382 29 24.21299514207357 24.968882450268584 25.99240901776203 24.825713389895814 30 24.641369058861752 24.81088651490998 26.09468612355603 24.453058302672236 31 24.805881264118586 24.769333489471972 24.863819402996352 25.56096584341309 32 24.513499066945702 24.81886658456796 24.952827872258446 25.714806476227892 33 24.160487228111 24.354275428562794 25.544722388014595 25.94051495531161 34 24.862922235401665 24.622056345902493 25.95855274589947 24.556468672796367 35 25.960441519783018 24.33765421838759 25.500241763057097 24.201662498772297 36 24.483562000891503 25.090897243145637 25.162009579861138 25.263531176101722 37 25.771658570122618 24.857539229833563 24.99447533639063 24.37632686365319 38 24.52299015571052 24.62923368665997 25.464827252740612 25.382948904888902 39 25.010341037012413 24.636080491987823 24.906647350805752 25.446931120194016 40 25.355278367494954 24.788835079819584 25.365005552995218 24.49088099969024 41 23.98119536721542 25.212534281245986 25.978857065147587 24.827413286391007 42 25.9097751603569 25.213950861658645 25.212534281245986 23.663739696738464 43 24.81782775893201 23.878493287297616 25.42431305293855 25.879365900831814 44 24.4066416844841 24.662192790927843 25.57668988599361 25.354475638594447 45 24.543058378223193 24.862875016054577 25.51912950189255 25.074937103829676 46 24.144691548767717 24.60068921424099 25.85663059419938 25.397988642791912 47 24.56086007207561 24.347853597358736 26.162351447934057 24.92893488263159 48 25.32874109443114 25.667776006527603 24.6744226018238 24.32906029721746 49 23.92585429242753 25.16361503766215 25.720944991349416 25.189585678560906 50 23.922560234208074 25.845332955578375 24.9470788917614 25.285027918452148 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 22.0 1 33.0 2 44.0 3 178.0 4 312.0 5 364.0 6 416.0 7 410.5 8 405.0 9 526.5 10 648.0 11 955.0 12 1262.0 13 2119.0 14 2976.0 15 4108.5 16 5241.0 17 6175.5 18 7110.0 19 7718.0 20 8326.0 21 9593.5 22 10861.0 23 11494.5 24 12128.0 25 13917.0 26 15706.0 27 19359.5 28 23013.0 29 25693.5 30 28374.0 31 30312.5 32 32251.0 33 36816.0 34 41381.0 35 47271.0 36 53161.0 37 65225.0 38 77289.0 39 84498.0 40 91707.0 41 100631.5 42 109556.0 43 112246.5 44 114937.0 45 129613.5 46 144290.0 47 155396.0 48 166502.0 49 167425.0 50 168348.0 51 156858.5 52 145369.0 53 141981.0 54 138593.0 55 141249.0 56 143905.0 57 141038.0 58 138171.0 59 126275.0 60 114379.0 61 100784.5 62 87190.0 63 76861.5 64 66533.0 65 56448.0 66 46363.0 67 41401.0 68 36439.0 69 34486.0 70 32533.0 71 24977.0 72 17421.0 73 15629.0 74 13837.0 75 9984.5 76 6132.0 77 5711.0 78 5290.0 79 4543.0 80 3796.0 81 2996.5 82 2197.0 83 1898.5 84 1600.0 85 1345.5 86 1091.0 87 780.5 88 470.0 89 296.0 90 122.0 91 78.5 92 35.0 93 26.0 94 17.0 95 13.5 96 10.0 97 10.0 98 10.0 99 8.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015299068456720634 2 0.004155302543800666 3 6.610708592410151E-4 4 1.4165804126593182E-4 5 0.0 6 6.138515121523712E-4 7 9.443869417728787E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.443869417728787E-5 47 0.0 48 0.0 49 0.0 50 4.7219347088643935E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2117776.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.49448527013298 #Duplication Level Percentage of deduplicated Percentage of total 1 78.77233683655766 38.98796265250956 2 12.662471493362942 12.534450176234618 3 3.7098857375383383 5.508566549714032 4 1.4950741939157457 2.9599171067407526 5 0.8030319518012943 1.9872826554937648 6 0.5035032223654499 1.4952379693698747 7 0.3373627424470791 1.1688316700717034 8 0.23769521518401085 0.9411681861364891 9 0.19224534082057676 0.8563575770546157 >10 1.0750869961811653 9.76699650488962 >50 0.09398206574669592 3.258681390369955 >100 0.09518440169357344 10.185184942002463 >500 0.015334928059349424 5.119084972034075 >1k 0.006804874326336307 5.230277647378546 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3145 0.14850484659378518 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2885 0.13622781635073775 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2746 0.12966432710541625 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2739 0.12933379167579573 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2637 0.12451741827275405 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2583 0.12196757352996729 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2556 0.12069265115857389 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2373 0.11205151064135206 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2325 0.10978498198109714 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2297 0.10846284026261512 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2288 0.10803786613881733 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2185 0.10317427338868701 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2165 0.10222988644691412 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2142 0.10114384146387531 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.416580412659318E-4 2 0.0 0.0 0.0 0.0 1.416580412659318E-4 3 0.0 0.0 0.0 0.0 1.416580412659318E-4 4 0.0 0.0 0.0 0.0 1.416580412659318E-4 5 0.0 0.0 0.0 0.0 1.416580412659318E-4 6 0.0 0.0 0.0 0.0 1.416580412659318E-4 7 0.0 0.0 0.0 0.0 1.416580412659318E-4 8 0.0 0.0 0.0 0.0 1.416580412659318E-4 9 0.0 0.0 0.0 0.0 1.416580412659318E-4 10 0.0 0.0 0.0 0.0 1.416580412659318E-4 11 0.0 0.0 0.0 0.0 1.416580412659318E-4 12 0.0 0.0 0.0 0.0 4.7219347088643936E-4 13 0.0 0.0 0.0 0.0 5.194128179750833E-4 14 0.0 0.0 0.0 0.0 5.194128179750833E-4 15 0.0 0.0 0.0 0.0 5.194128179750833E-4 16 0.0 0.0 0.0 9.443869417728787E-5 5.666321650637272E-4 17 0.0 0.0 0.0 9.443869417728787E-5 6.610708592410151E-4 18 0.0 0.0 0.0 2.833160825318636E-4 7.55509553418303E-4 19 0.0 0.0 0.0 4.249741237977954E-4 7.55509553418303E-4 20 0.0 0.0 0.0 5.666321650637272E-4 8.02728900506947E-4 21 0.0 0.0 0.0 7.55509553418303E-4 8.02728900506947E-4 22 0.0 0.0 0.0 0.0012749223713933863 8.499482475955908E-4 23 0.0 0.0 0.0 0.0022665286602549088 9.916062888615227E-4 24 0.0 0.0 0.0 0.0035414510316482952 9.916062888615227E-4 25 0.0 0.0 0.0 0.004580276667598462 0.0010388256359501666 26 0.0 0.0 0.0 0.005383005568105409 0.0010388256359501666 27 0.0 0.0 0.0 0.007224560104562522 0.0010860449830388105 28 0.0 0.0 0.0 0.015157410415454703 0.0010860449830388105 29 0.0 0.0 0.0 0.029559311277491104 0.0010860449830388105 30 0.0 0.0 0.0 0.056804874547638655 0.0010860449830388105 31 0.0 0.0 0.0 0.11738729686236883 0.0011332643301274544 32 0.0 0.0 0.0 0.18410823429862272 0.0011332643301274544 33 0.0 0.0 0.0 0.25163190063538354 0.0011332643301274544 34 0.0 0.0 0.0 0.32760783010101163 0.0011804836772160985 35 0.0 0.0 0.0 0.4183634152053853 0.0011804836772160985 36 0.0 0.0 0.0 0.548358277740422 0.0011804836772160985 37 0.0 0.0 0.0 0.7288778416603078 0.0011804836772160985 38 0.0 0.0 0.0 0.9683271507468212 0.0012277030243047424 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACGG 335 0.0 19.044674 35 TAACGGC 340 0.0 18.764605 36 TACGGTA 60 0.007414127 18.333235 4 TAGATCG 60 0.007414127 18.333235 5 CGATTAA 145 6.315531E-9 18.206799 33 ACGATTA 145 6.315531E-9 18.206799 32 TACGCAA 85 1.4315346E-4 18.11755 13 TAGTACG 135 5.5286364E-8 17.926676 2 TACCGTC 645 0.0 17.736338 7 ATACCGT 665 0.0 17.533741 6 CGCGCCA 185 4.2382453E-10 16.648558 10 ACCGTCG 635 0.0 16.629833 8 TAGGACG 120 6.4114374E-6 16.49991 4 CGCAATA 845 0.0 16.402279 36 ACTAGAC 135 1.0864496E-6 16.29621 3 CGAATGC 840 0.0 16.238008 43 CGAGCCG 970 0.0 16.103006 15 CTATAGA 425 0.0 16.050003 1 ATACGAA 850 0.0 16.046972 40 CCGTCGT 665 0.0 15.548789 9 >>END_MODULE