##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062466_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1480138 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.143546750370575 32.0 32.0 32.0 32.0 32.0 2 30.771072697275525 32.0 32.0 32.0 32.0 32.0 3 30.76765274589261 32.0 32.0 32.0 32.0 32.0 4 30.84800471307405 32.0 32.0 32.0 32.0 32.0 5 30.62402019271176 32.0 32.0 32.0 32.0 32.0 6 34.282265572534456 36.0 36.0 36.0 32.0 36.0 7 34.15190543043959 36.0 36.0 36.0 32.0 36.0 8 34.14070039415244 36.0 36.0 36.0 32.0 36.0 9 34.31740959288931 36.0 36.0 36.0 32.0 36.0 10 33.954419114974414 36.0 36.0 36.0 32.0 36.0 11 34.31393964616813 36.0 36.0 36.0 32.0 36.0 12 34.067836917909005 36.0 36.0 36.0 32.0 36.0 13 34.19867404255549 36.0 36.0 36.0 32.0 36.0 14 34.10179118433552 36.0 36.0 36.0 32.0 36.0 15 34.037120187441985 36.0 36.0 36.0 32.0 36.0 16 34.03783768810746 36.0 36.0 36.0 32.0 36.0 17 33.968050952005825 36.0 36.0 36.0 32.0 36.0 18 33.97699673949321 36.0 36.0 36.0 32.0 36.0 19 33.972303258209706 36.0 36.0 36.0 32.0 36.0 20 33.951920023673466 36.0 36.0 36.0 32.0 36.0 21 33.92405910800209 36.0 36.0 36.0 32.0 36.0 22 33.879078842648454 36.0 36.0 36.0 32.0 36.0 23 33.835528849337024 36.0 36.0 36.0 32.0 36.0 24 33.808765804269605 36.0 36.0 36.0 32.0 36.0 25 33.337660407340394 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 6.0 4 57.0 5 138.0 6 252.0 7 54.0 8 224.0 9 291.0 10 169.0 11 59.0 12 118.0 13 91.0 14 290.0 15 325.0 16 486.0 17 710.0 18 963.0 19 1268.0 20 2074.0 21 2939.0 22 4520.0 23 6791.0 24 9614.0 25 13420.0 26 18561.0 27 23857.0 28 32129.0 29 42311.0 30 54881.0 31 75399.0 32 106528.0 33 153868.0 34 331876.0 35 595867.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.50899174607979 17.6599838921531 11.007186369950757 25.82383799181635 2 16.438753214322873 20.392150768802523 37.65983782111137 25.50925819576324 3 19.01339934813982 24.754066018409915 28.273759654935702 27.958774978514562 4 12.20750068584881 15.636069025446004 36.88082718096543 35.275603107739755 5 14.039693026179284 37.18546503965585 34.140327992944066 14.634513941220797 6 33.25681856740295 36.09171768214333 17.476999945250036 13.174463805203679 7 29.553502975429886 30.857729694938996 21.438645026684895 18.150122302946222 8 27.722913547587847 33.18240034839012 20.122639812496875 18.972046291525167 9 27.366046279809105 14.460056495532228 18.905241830498525 39.26865539416015 10 15.296752534746439 27.172535923422892 32.55474166183584 24.97596987999483 11 36.94733694909568 21.520595369677654 22.620543825447697 18.911523855778974 12 24.291933470667626 24.2485006545366 29.473292538959306 21.986273335836472 13 29.319727661071294 20.081241692343596 25.579633431531384 25.01939721505373 14 22.992536551146575 20.346066451956375 25.880369702172334 30.781027294724716 15 24.785296904771727 27.87883420125443 22.973248099175006 24.362620794798833 16 25.085968063980264 26.30169582321016 24.70144529157445 23.910890821235125 17 23.331132619183553 26.320969649085306 26.079747928036646 24.268149803694495 18 24.043916583117188 25.294926280268925 27.3264978358317 23.334659300782185 19 24.785018580645684 25.874555441223528 25.88010291235469 23.460323065776095 20 24.94070884219555 25.072076130793658 26.091356411224258 23.895858615786533 21 26.044656719649023 24.948297382227288 24.785325048286218 24.221720849837467 22 24.792592116436666 25.411449470019658 25.62851642719156 24.167441986352117 23 23.649208648474566 25.17501205988196 26.040481962273038 25.13529732937043 24 23.91542753381498 25.89869408172695 25.962085545325575 24.22379283913249 25 24.192618730947775 25.40654889072599 25.888697812300855 24.512134566025377 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 242.0 1 242.0 2 589.5 3 937.0 4 937.0 5 937.0 6 2434.5 7 3932.0 8 3932.0 9 3932.0 10 4173.0 11 4414.0 12 4414.0 13 4414.0 14 4817.5 15 5221.0 16 5221.0 17 5221.0 18 8691.5 19 12162.0 20 12162.0 21 12162.0 22 19358.0 23 26554.0 24 26554.0 25 26554.0 26 39171.5 27 51789.0 28 51789.0 29 51789.0 30 64072.5 31 76356.0 32 76356.0 33 76356.0 34 91127.5 35 105899.0 36 105899.0 37 105899.0 38 116996.5 39 128094.0 40 128094.0 41 128094.0 42 143466.5 43 158839.0 44 158839.0 45 158839.0 46 179291.0 47 199743.0 48 199743.0 49 199743.0 50 195362.0 51 190981.0 52 190981.0 53 190981.0 54 173602.0 55 156223.0 56 156223.0 57 156223.0 58 141521.5 59 126820.0 60 126820.0 61 126820.0 62 111790.0 63 96760.0 64 96760.0 65 96760.0 66 80109.5 67 63459.0 68 63459.0 69 63459.0 70 48032.5 71 32606.0 72 32606.0 73 32606.0 74 25621.0 75 18636.0 76 18636.0 77 18636.0 78 15233.5 79 11831.0 80 11831.0 81 11831.0 82 8284.0 83 4737.0 84 4737.0 85 4737.0 86 3501.5 87 2266.0 88 2266.0 89 2266.0 90 1525.0 91 784.0 92 784.0 93 784.0 94 480.5 95 177.0 96 177.0 97 177.0 98 426.5 99 676.0 100 676.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0077019845446843465 2 0.0029726957891764143 3 0.004459043683764622 4 0.014863478945882075 5 0.036010155809796114 6 0.04627946853604191 7 0.06918273836628747 8 0.09026185396226567 9 0.09708554202378426 10 0.12059686326545227 11 0.12134003721274637 12 0.1346496069961044 13 0.12383980412637201 14 0.12613688723619013 15 0.11492171675884276 16 0.11363805266806204 17 0.1236371203225645 18 0.13323082036945205 19 0.13424423938848945 20 0.1243127330019228 21 0.13329838163738786 22 0.15221553665941961 23 0.1416759788614305 24 0.1365413224983076 25 0.1326903302259654 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1480138.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.63537821224105 #Duplication Level Percentage of deduplicated Percentage of total 1 77.07875822402809 42.1122710769966 2 14.364472210223598 15.696167440495849 3 4.376238671246875 7.172923648518245 4 1.6452234989468735 3.59549632434516 5 0.8016005853508025 2.1897875577897454 6 0.4212113169419913 1.3807823765041096 7 0.24648930872581998 0.9426925625256316 8 0.16840400036875156 0.7360653002080898 9 0.11148326039004987 0.5481837086169713 >10 0.6048582105015841 6.259363793671363 >50 0.0780114627795643 2.994300779282667 >100 0.09083956289185119 10.408003873991918 >500 0.009183168827035706 3.3406130972975694 >1k 0.0032265187770665997 2.6233484597559933 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3013 0.20356210029064858 No Hit GTACATGGAAGCAGTGGTATCAACG 2910 0.19660328969325833 No Hit TCCATGTACTCTGCGTTGATACCAC 2585 0.17464587761411435 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2157 0.14572965493758014 No Hit TATCAACGCAGAGTACTTTTTTTTT 2083 0.1407301211103289 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1607 0.10857095757287497 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 6.75612679358276E-5 0.0 10 0.0 0.0 0.0 6.75612679358276E-5 0.0 11 0.0 0.0 0.0 6.75612679358276E-5 0.0 12 0.0 0.0 0.0 1.351225358716552E-4 0.0 13 0.0 0.0 0.0 1.351225358716552E-4 6.75612679358276E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCTA 75 9.640753E-7 13.9373045 16 CGTCGTA 185 0.0 13.865531 10 CCGTCGT 205 0.0 12.976234 9 CGAACGA 120 7.366907E-10 12.670278 16 CGTTATT 90 5.432321E-7 12.661278 2 GTCGTAG 205 0.0 12.512373 11 CAAGACG 255 0.0 12.292628 4 TAAGCCC 70 1.0920646E-4 12.212807 4 TCGAACT 55 0.0030617814 12.094355 19 ACGGTAT 220 0.0 12.091491 9 CGCATCG 205 0.0 12.048544 13 CGTCTAT 95 1.0471394E-6 11.992867 1 AGCCCCG 250 0.0 11.783358 16 CGCGTAT 65 8.0175017E-4 11.693265 7 GCGCGCT 90 7.458575E-6 11.611277 15 GCATCGC 230 0.0 11.564992 14 ACGCCCC 140 6.7666406E-10 11.539001 17 GCGTTAT 100 1.943028E-6 11.393223 1 CGCAAGA 260 0.0 11.3221035 2 ACCGTCG 235 0.0 11.320076 8 >>END_MODULE