##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062463_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1218386 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.214075834751878 32.0 32.0 32.0 32.0 32.0 2 31.397330566831858 32.0 32.0 32.0 32.0 32.0 3 31.477406995812494 32.0 32.0 32.0 32.0 32.0 4 31.587777600858843 32.0 32.0 32.0 32.0 32.0 5 31.521437376988903 32.0 32.0 32.0 32.0 32.0 6 35.09669021147649 36.0 36.0 36.0 36.0 36.0 7 35.10463596922486 36.0 36.0 36.0 36.0 36.0 8 35.05586735238258 36.0 36.0 36.0 36.0 36.0 9 35.15996244211605 36.0 36.0 36.0 36.0 36.0 10 35.05395744862466 36.0 36.0 36.0 36.0 36.0 11 35.16982549044391 36.0 36.0 36.0 36.0 36.0 12 35.07936893562467 36.0 36.0 36.0 36.0 36.0 13 35.123002890709515 36.0 36.0 36.0 36.0 36.0 14 35.07185325504397 36.0 36.0 36.0 36.0 36.0 15 35.04876697532637 36.0 36.0 36.0 36.0 36.0 16 35.05002437651122 36.0 36.0 36.0 36.0 36.0 17 35.0256043651191 36.0 36.0 36.0 36.0 36.0 18 35.03305684733738 36.0 36.0 36.0 36.0 36.0 19 35.00426876211644 36.0 36.0 36.0 36.0 36.0 20 34.99384431534834 36.0 36.0 36.0 36.0 36.0 21 34.95155640330733 36.0 36.0 36.0 36.0 36.0 22 34.927076476584595 36.0 36.0 36.0 32.0 36.0 23 34.856817954244384 36.0 36.0 36.0 32.0 36.0 24 34.841919555871456 36.0 36.0 36.0 32.0 36.0 25 34.811520322787686 36.0 36.0 36.0 32.0 36.0 26 34.75260877915537 36.0 36.0 36.0 32.0 36.0 27 34.73399973407442 36.0 36.0 36.0 32.0 36.0 28 34.69271150522084 36.0 36.0 36.0 32.0 36.0 29 34.66361317349346 36.0 36.0 36.0 32.0 36.0 30 34.630788600656935 36.0 36.0 36.0 32.0 36.0 31 34.62356428914974 36.0 36.0 36.0 32.0 36.0 32 34.57205023695282 36.0 36.0 36.0 32.0 36.0 33 34.51766189040255 36.0 36.0 36.0 32.0 36.0 34 34.48840597314808 36.0 36.0 36.0 32.0 36.0 35 34.406957236869104 36.0 36.0 36.0 32.0 36.0 36 34.368998823033095 36.0 36.0 36.0 32.0 36.0 37 34.309074464086095 36.0 36.0 36.0 32.0 36.0 38 34.23713831248882 36.0 36.0 36.0 32.0 36.0 39 34.11955981109435 36.0 36.0 36.0 32.0 36.0 40 34.03728375079819 36.0 36.0 36.0 32.0 36.0 41 34.02903595412291 36.0 36.0 36.0 32.0 36.0 42 33.89635878941485 36.0 36.0 36.0 32.0 36.0 43 33.925547404517125 36.0 36.0 36.0 32.0 36.0 44 33.89935209367146 36.0 36.0 36.0 32.0 36.0 45 33.709116815196495 36.0 36.0 36.0 27.0 36.0 46 33.80886024626022 36.0 36.0 36.0 32.0 36.0 47 33.71868274914518 36.0 36.0 36.0 27.0 36.0 48 33.70742933684399 36.0 36.0 36.0 27.0 36.0 49 33.72673930921727 36.0 36.0 36.0 27.0 36.0 50 33.1191100357358 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 6.0 21 35.0 22 124.0 23 384.0 24 1135.0 25 2757.0 26 5787.0 27 11112.0 28 18263.0 29 27169.0 30 37005.0 31 50875.0 32 74014.0 33 104414.0 34 206421.0 35 678881.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.60970540334655 17.63335982032625 12.209655493971473 25.547279282355724 2 14.921712636621217 21.596165905516724 36.78734532130815 26.694776136553912 3 18.68623694781094 25.604779469097437 28.763323040961016 26.9456605421306 4 12.231847897011207 16.276382260123032 35.63971979300467 35.852050049861084 5 13.492029619513026 37.5076535679169 33.75268593040301 15.247630882167062 6 33.731156346003424 34.93266884496721 17.43494030192526 13.9012345071041 7 28.790489049028018 31.165107909240515 21.551397957131776 18.493005084599694 8 28.444269714195663 32.518101816665656 20.511397865701017 18.526230603437664 9 27.30251332500538 14.558932883339107 18.612574340151646 39.52597945150387 10 15.626985208300162 27.51870096997175 32.07776517458342 24.776548647144665 11 37.00379026022952 21.33314072880023 21.556633119553243 20.106435891417007 12 23.541225851249113 24.247816373464566 29.528737198227816 22.6822205770585 13 30.482622091849382 19.749159954234536 25.3573990508755 24.410818903040578 14 24.084649692297845 19.476257934677516 25.301833737419834 31.13725863560481 15 25.522863854312178 26.635401260355913 24.424771788251014 23.41696309708089 16 25.77040445310435 25.474274983461726 25.28829123118618 23.467029332247744 17 23.672382972227194 25.632352965316414 27.027559410564468 23.66770465189193 18 25.225257020353155 23.865835621880095 28.385339293130418 22.52356806463633 19 24.546982647535344 27.14016740179221 25.648686048592158 22.664163902080293 20 24.5806337236311 23.538599425797734 28.27396243883301 23.606804411738153 21 25.69899851114507 25.399011479120738 24.225984211900006 24.676005797834183 22 24.153347133010392 25.66953330061245 25.590904688661887 24.586214877715275 23 22.982617988059616 24.792060972466853 25.64802944222931 26.577291597244223 24 23.14537429024956 26.78502543528898 25.699244738531142 24.370355535930322 25 25.021216593099393 24.342778068690873 25.153030320440322 25.48297501776941 26 22.858683537072817 25.31439133410922 26.59518412063172 25.231741008186244 27 25.39334824924121 25.589919779117622 25.935212650178187 23.081519321462984 28 23.942740642128193 24.187162360696856 26.473055337142743 25.397041660032205 29 23.118863808349737 25.729694858608028 27.325084168728136 23.826357164314103 30 24.761857079776032 24.88103113463221 26.895335304246764 23.46177648134499 31 23.308376819825572 25.279509121083137 25.813904624642763 25.598209434448528 32 23.3782233216731 25.86085197958611 26.02516772188781 24.735756976852986 33 23.23048689003321 24.85846029090945 26.489798799395263 25.421254019662076 34 23.30952588096055 26.044127230614926 27.353564469716495 23.29278241870803 35 25.45966549188845 25.057329943055812 26.31588018903697 23.167124376018766 36 23.669346167799038 26.317603780739436 26.04568667072668 23.96736338073484 37 25.186271017559296 25.74693077563268 26.10002084725202 22.966777359556005 38 24.007908823640456 25.478132545843437 25.437669178733174 25.076289451782934 39 24.026868332367574 25.108955618334424 26.441702383316944 24.42247366598106 40 25.40533131536311 25.318741351263064 25.30199788901054 23.973929444363282 41 22.801312556119324 25.632188813725698 27.04922742053832 24.517271209616656 42 25.984622278982194 25.886213400350954 25.86044160060933 22.268722720057518 43 24.53762600686482 24.011766386022163 25.702281542959295 25.748326064153726 44 23.862880893247297 25.10476975277129 27.05776330325529 23.974586050726124 45 24.459407773891034 25.415098335010416 25.899345527607835 24.226148363490715 46 23.30109119859486 24.87719399040533 27.183525732834855 24.63818907816495 47 24.53540996039022 24.39661979044408 27.443519541426113 23.624450707739584 48 24.107384687611315 27.574676662404197 24.75126930217517 23.566669347809317 49 22.92508285551541 25.420761564889943 27.757377382865528 23.896778196729116 50 23.07831836544412 27.681785575343117 24.22787195519318 25.01202410401958 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 27.0 1 31.5 2 36.0 3 167.5 4 299.0 5 323.5 6 348.0 7 340.0 8 332.0 9 425.0 10 518.0 11 812.0 12 1106.0 13 1896.0 14 2686.0 15 3594.0 16 4502.0 17 5271.5 18 6041.0 19 6514.5 20 6988.0 21 7565.0 22 8142.0 23 8838.0 24 9534.0 25 9678.5 26 9823.0 27 11757.5 28 13692.0 29 16065.0 30 18438.0 31 20364.5 32 22291.0 33 25385.5 34 28480.0 35 32374.0 36 36268.0 37 41127.5 38 45987.0 39 49061.0 40 52135.0 41 56273.5 42 60412.0 43 64653.0 44 68894.0 45 81549.0 46 94204.0 47 104832.0 48 115460.0 49 110709.0 50 105958.0 51 93119.5 52 80281.0 53 76208.5 54 72136.0 55 72634.0 56 73132.0 57 71457.5 58 69783.0 59 63407.0 60 57031.0 61 49643.5 62 42256.0 63 36822.5 64 31389.0 65 26885.0 66 22381.0 67 19748.5 68 17116.0 69 16184.0 70 15252.0 71 11887.5 72 8523.0 73 7620.5 74 6718.0 75 4788.5 76 2859.0 77 2673.5 78 2488.0 79 2100.0 80 1712.0 81 1385.0 82 1058.0 83 907.0 84 756.0 85 659.5 86 563.0 87 408.5 88 254.0 89 151.0 90 48.0 91 37.0 92 26.0 93 19.5 94 13.0 95 7.5 96 2.0 97 3.5 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01460949157327809 2 0.004432092949196724 3 6.566063628439592E-4 4 8.20757953554949E-5 5 0.0 6 4.103789767774745E-4 7 8.20757953554949E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.20757953554949E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1218386.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.62751732297413 #Duplication Level Percentage of deduplicated Percentage of total 1 79.57806106896061 42.67573848504379 2 12.600233334957686 13.514384628879188 3 3.576681077084872 5.754255792603683 4 1.4073093200562554 3.0188201976039912 5 0.7382682165605331 1.97957457863006 6 0.43019337681087483 1.3842121660292357 7 0.28314690803294434 1.0629126000838303 8 0.1901697631077079 0.8158665812291594 9 0.14969795142899822 0.722513653512511 >10 0.854852713928516 8.497791547491174 >50 0.08963703680988443 3.363484518735115 >100 0.08866499280994228 9.977163736125846 >500 0.009235933730292738 3.3747278862303354 >1k 0.0035404412632788827 2.684031762747807 >5k 3.0786445767642457E-4 1.174521865054309 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 7541 0.618933572775787 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 6687 0.5488408435421943 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2776 0.22784240790685384 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2705 0.22201502643661367 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1765 0.1448637788024485 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1712 0.14051376164860727 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1708 0.14018545846718528 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1696 0.13920054892291933 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1366 0.11211553645560603 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1341 0.11006364157171865 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1329 0.10907873202745272 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1311 0.1076013677110538 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1275 0.104646639078256 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1254 0.10292304737579058 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1250 0.10259474419436862 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1247 0.10234851680830212 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1244 0.10210228942223565 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 8.207579535549489E-5 0.0 10 0.0 0.0 0.0 8.207579535549489E-5 0.0 11 0.0 0.0 0.0 8.207579535549489E-5 0.0 12 0.0 0.0 0.0 8.207579535549489E-5 0.0 13 0.0 0.0 0.0 8.207579535549489E-5 0.0 14 0.0 0.0 0.0 8.207579535549489E-5 0.0 15 0.0 0.0 0.0 8.207579535549489E-5 0.0 16 0.0 0.0 0.0 3.2830318142197955E-4 0.0 17 0.0 0.0 0.0 4.103789767774745E-4 0.0 18 0.0 0.0 0.0 4.924547721329693E-4 0.0 19 0.0 0.0 0.0 4.924547721329693E-4 0.0 20 0.0 0.0 0.0 6.566063628439591E-4 0.0 21 0.0 0.0 0.0 9.028337489104438E-4 0.0 22 1.6415159071098977E-4 0.0 0.0 0.001477364316398908 0.0 23 1.6415159071098977E-4 0.0 0.0 0.0033651076095752904 0.0 24 1.6415159071098977E-4 0.0 0.0 0.006073608856306622 0.0 25 1.6415159071098977E-4 0.0 0.0 0.007961352149483004 0.0 26 1.6415159071098977E-4 0.0 0.0 0.01108023237299181 0.0 27 1.6415159071098977E-4 0.0 0.0 0.015019870550055565 8.207579535549489E-5 28 1.6415159071098977E-4 0.0 0.0 0.024130283834515497 8.207579535549489E-5 29 1.6415159071098977E-4 0.0 0.0 0.0402171397241925 8.207579535549489E-5 30 1.6415159071098977E-4 0.0 0.0 0.06886159230326021 8.207579535549489E-5 31 1.6415159071098977E-4 0.0 0.0 0.12335992041930882 8.207579535549489E-5 32 1.6415159071098977E-4 0.0 0.0 0.19542246874143335 8.207579535549489E-5 33 1.6415159071098977E-4 0.0 0.0 0.25295760128563527 8.207579535549489E-5 34 1.6415159071098977E-4 0.0 0.0 0.33158621323619936 8.207579535549489E-5 35 1.6415159071098977E-4 0.0 0.0 0.41226672007065085 8.207579535549489E-5 36 1.6415159071098977E-4 0.0 0.0 0.5418644009369773 8.207579535549489E-5 37 1.6415159071098977E-4 0.0 0.0 0.7349887474084568 8.207579535549489E-5 38 1.6415159071098977E-4 0.0 0.0 0.9476471331745441 8.207579535549489E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGGTATA 475 0.0 24.5473 44 GATATAC 430 0.0 22.002647 1 TACACCG 70 3.21545E-5 21.999939 5 TAGTACT 120 5.984475E-10 21.999939 4 TAGCGGC 320 0.0 19.937445 30 CGCAATA 335 0.0 19.701437 36 TCGTATA 80 8.988839E-5 19.249947 44 ATCACGG 190 1.8189894E-12 18.526262 35 ATACACT 575 0.0 18.365166 4 AGGATCG 60 0.007412253 18.333282 5 AATCCCG 305 0.0 18.032736 19 ATCCCGT 310 0.0 17.741886 20 CGAATGT 310 0.0 17.741886 33 GTACACG 75 0.0012898376 17.602118 1 CGTTTCC 350 0.0 17.59995 24 GTACGAC 75 0.0012909027 17.59995 3 CTAGCGG 365 0.0 17.479403 29 CGGTCCA 405 0.0 17.382668 10 CGGTGAT 140 8.3724444E-8 17.285666 43 TCTAGCG 370 0.0 17.243196 28 >>END_MODULE