##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062462_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 906578 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.026204033188538 32.0 32.0 32.0 32.0 32.0 2 30.763152205325962 32.0 32.0 32.0 32.0 32.0 3 30.763208460827418 32.0 32.0 32.0 32.0 32.0 4 30.784129992124228 32.0 32.0 32.0 32.0 32.0 5 30.650581637763104 32.0 32.0 32.0 32.0 32.0 6 34.25339904564196 36.0 36.0 36.0 32.0 36.0 7 34.10500585719045 36.0 36.0 36.0 32.0 36.0 8 34.0933146403288 36.0 36.0 36.0 32.0 36.0 9 34.21899935802546 36.0 36.0 36.0 32.0 36.0 10 33.93774060257363 36.0 36.0 36.0 32.0 36.0 11 34.25120066888894 36.0 36.0 36.0 32.0 36.0 12 34.049302983306454 36.0 36.0 36.0 32.0 36.0 13 34.14965507656263 36.0 36.0 36.0 32.0 36.0 14 34.05546461528959 36.0 36.0 36.0 32.0 36.0 15 34.031096055717214 36.0 36.0 36.0 32.0 36.0 16 34.02303607632217 36.0 36.0 36.0 32.0 36.0 17 33.953118209354294 36.0 36.0 36.0 32.0 36.0 18 33.969850360366124 36.0 36.0 36.0 32.0 36.0 19 33.955718095960854 36.0 36.0 36.0 32.0 36.0 20 33.92805583193062 36.0 36.0 36.0 32.0 36.0 21 33.88991460194269 36.0 36.0 36.0 32.0 36.0 22 33.8433879930905 36.0 36.0 36.0 32.0 36.0 23 33.80503497768532 36.0 36.0 36.0 32.0 36.0 24 33.793618420036665 36.0 36.0 36.0 32.0 36.0 25 33.32319447416549 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 4.0 4 34.0 5 92.0 6 168.0 7 39.0 8 136.0 9 179.0 10 114.0 11 38.0 12 65.0 13 46.0 14 238.0 15 307.0 16 420.0 17 512.0 18 773.0 19 985.0 20 1554.0 21 2319.0 22 3520.0 23 4720.0 24 6417.0 25 8702.0 26 11681.0 27 14602.0 28 19776.0 29 25777.0 30 32705.0 31 44810.0 32 62641.0 33 90466.0 34 199819.0 35 372918.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.636545154689216 17.51956712392236 11.619369108489291 25.224518612899132 2 15.779342691931793 20.817917678749893 37.59467252627004 25.80806710304827 3 19.2408244129301 25.446204011754638 28.225685466434868 27.0872861088804 4 12.35798996083623 16.113188813503225 35.918031882619005 35.61078934304154 5 13.816378956474914 37.45492344157593 33.825515649345206 14.903181952603958 6 33.238978094134524 35.21789990619655 17.796501682944324 13.746620316724604 7 28.913062675232354 31.13881714020796 21.68289290681502 18.265227277744664 8 28.03457454736556 32.8834682303012 20.409316888820683 18.672640333512557 9 27.47015170101903 14.846802839466777 18.974497136352042 38.70854832316215 10 15.708189392399918 27.573818506312787 32.26820723960312 24.449784861684176 11 36.206970813762275 21.84301698250946 22.230996144505397 19.71901605922287 12 24.055632626732997 24.39118678813477 29.586753673644306 21.966426911487925 13 29.993815229996134 20.298746479651005 25.33591032083494 24.37152796951792 14 23.622678601997933 20.047822317449622 25.752594057000227 30.576905023552214 15 24.941580270254747 27.19167855675659 24.170638619306562 23.6961025536821 16 24.939013818381 26.066416132819015 25.309734708729554 23.684835340070435 17 23.207653236467735 26.01786741797146 26.75319483084046 24.021284514720353 18 24.17903095222579 24.700810614085178 28.294617738962163 22.825540694726868 19 24.496970834967115 26.547745936721658 26.119189498158203 22.83609373015303 20 24.619387729181874 24.474376800902096 27.507347183552028 23.398888286364002 21 25.697841504132434 25.266208599744424 24.721807733386054 24.31414216273709 22 24.57920529567208 25.858933795261112 25.50431289715331 24.057548011913493 23 23.325810873654714 25.504562631380693 25.897365371721076 25.272261123243517 24 23.510718672404497 26.491379995935212 25.987257769491105 24.010643562169186 25 24.401900663597566 25.25779572505324 25.7795725053238 24.560731106025397 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 359.0 1 359.0 2 706.0 3 1053.0 4 1053.0 5 1053.0 6 2643.0 7 4233.0 8 4233.0 9 4233.0 10 4074.0 11 3915.0 12 3915.0 13 3915.0 14 3683.0 15 3451.0 16 3451.0 17 3451.0 18 5531.5 19 7612.0 20 7612.0 21 7612.0 22 11908.5 23 16205.0 24 16205.0 25 16205.0 26 23445.5 27 30686.0 28 30686.0 29 30686.0 30 37365.5 31 44045.0 32 44045.0 33 44045.0 34 52108.0 35 60171.0 36 60171.0 37 60171.0 38 67180.5 39 74190.0 40 74190.0 41 74190.0 42 85389.5 43 96589.0 44 96589.0 45 96589.0 46 117968.5 47 139348.0 48 139348.0 49 139348.0 50 129945.0 51 120542.0 52 120542.0 53 120542.0 54 107156.0 55 93770.0 56 93770.0 57 93770.0 58 84820.0 59 75870.0 60 75870.0 61 75870.0 62 66733.0 63 57596.0 64 57596.0 65 57596.0 66 47273.0 67 36950.0 68 36950.0 69 36950.0 70 27934.0 71 18918.0 72 18918.0 73 18918.0 74 14547.0 75 10176.0 76 10176.0 77 10176.0 78 8272.0 79 6368.0 80 6368.0 81 6368.0 82 4370.0 83 2372.0 84 2372.0 85 2372.0 86 1821.0 87 1270.0 88 1270.0 89 1270.0 90 849.0 91 428.0 92 428.0 93 428.0 94 256.5 95 85.0 96 85.0 97 85.0 98 230.5 99 376.0 100 376.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009155307099885504 2 0.003529756954172724 3 0.004632806002351701 4 0.014119027816690896 5 0.03772427744772099 6 0.04721049926206019 7 0.07037452927381868 8 0.09100154647476555 9 0.10092898790837633 10 0.12287966396713795 11 0.12321057868159165 12 0.13346893482965613 13 0.12442393263458852 14 0.12607850620685698 15 0.11714380891660729 16 0.11526862553470302 17 0.12475484734904223 18 0.13402045935374562 19 0.13379984954410984 20 0.12453423753940643 21 0.13004948278030132 22 0.15288259807760612 23 0.14218302231027005 24 0.13699869178382887 25 0.13346893482965613 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 906578.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.6001597053167 #Duplication Level Percentage of deduplicated Percentage of total 1 82.69227012075926 48.45780235471681 2 11.616631453804976 13.614729168615542 3 2.711435948229759 4.766717387910021 4 1.013367468806842 2.375339820490139 5 0.4641344946424388 1.3599177755396685 6 0.2832869974710291 0.9960397976545172 7 0.1736275948849747 0.7122223352656682 8 0.13058223190936122 0.6121711715652216 9 0.09492063755787153 0.5006128068199579 >10 0.6394171677027901 7.414804905053746 >50 0.08997636526194747 3.7318136063561513 >100 0.08223881061821826 9.304828430670167 >500 0.005281391484050983 2.0967973545246807 >1k 0.0024520746175950995 2.7494904688350785 >5k 3.772422488607845E-4 1.306712615982645 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 6352 0.7006567554032858 No Hit TCCATGTACTCTGCGTTGATACCAC 5470 0.6033678293539 No Hit GTATCAACGCAGAGTACTTTTTTTT 3105 0.34249672945957216 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2896 0.31944300435263157 No Hit GAGTACATGGAAGCAGTGGTATCAA 2694 0.2971614135794162 No Hit TATCAACGCAGAGTACTTTTTTTTT 2278 0.2512745731751708 No Hit CATGTACTCTGCGTTGATACCACTG 2211 0.24388414455237167 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1895 0.20902779462991602 No Hit GCTTCCATGTACTCTGCGTTGATAC 1671 0.18431949595070696 No Hit GCGTTGATACCACTGCTTCCATGTA 1586 0.17494357904118565 No Hit CATGGAAGCAGTGGTATCAACGCAG 1445 0.15939058746186208 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1436 0.15839784331850099 No Hit GTATCAACGCAGAGTACATGGAAGC 1311 0.1446097302162638 No Hit CCCATGTACTCTGCGTTGATACCAC 1242 0.13699869178382887 No Hit GGTATCAACGCAGAGTACTTTTTTT 1105 0.12188691982377689 No Hit ACGCAGAGTACATGGAAGCAGTGGT 971 0.10710606257817859 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.1030490481789763E-4 0.0 11 0.0 0.0 0.0 1.1030490481789763E-4 0.0 12 0.0 0.0 0.0 2.2060980963579526E-4 0.0 13 0.0 0.0 0.0 2.2060980963579526E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTAG 80 1.2853343E-7 14.250954 10 CGACCCG 80 1.2879354E-7 14.248592 5 AATTCCG 70 7.261946E-6 13.5700865 5 GCAAGAC 140 0.0 13.566339 3 TTTGCGC 50 0.0014960779 13.303096 17 ACCGTCC 50 0.0014979482 13.30089 8 GTCCGTT 50 0.0014985721 13.300155 11 AATCGTA 50 0.0014985721 13.300155 13 TCGCGTA 65 5.444164E-5 13.154726 9 GCGTAAC 80 1.99651E-6 13.062653 11 CGCAAGA 140 3.6379788E-12 12.88731 2 GCACCGT 60 4.0867855E-4 12.667514 6 CGCGTAA 75 1.4759531E-5 12.667514 10 CAAGACG 135 2.7284841E-11 12.664715 4 GTCTAAC 60 4.1135345E-4 12.657722 1 AGGCCCG 100 1.438566E-7 12.350826 10 TATACTG 125 1.4078978E-9 12.158798 5 GCGGTCG 55 0.0030652075 12.091717 9 CCGTTGA 55 0.0030664764 12.09105 13 GACTGCT 80 2.8613014E-5 11.875795 7 >>END_MODULE