##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062462_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 906578 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.232289996006962 32.0 32.0 32.0 32.0 32.0 2 31.422706044046954 32.0 32.0 32.0 32.0 32.0 3 31.503389669725053 32.0 32.0 32.0 32.0 32.0 4 31.604902170579916 32.0 32.0 32.0 32.0 32.0 5 31.546836565634727 32.0 32.0 32.0 32.0 32.0 6 35.130647335364415 36.0 36.0 36.0 36.0 36.0 7 35.14084722991293 36.0 36.0 36.0 36.0 36.0 8 35.09738158216943 36.0 36.0 36.0 36.0 36.0 9 35.20871232260214 36.0 36.0 36.0 36.0 36.0 10 35.100577115262006 36.0 36.0 36.0 36.0 36.0 11 35.21352382255029 36.0 36.0 36.0 36.0 36.0 12 35.133459007388225 36.0 36.0 36.0 36.0 36.0 13 35.16080579939067 36.0 36.0 36.0 36.0 36.0 14 35.12253440961506 36.0 36.0 36.0 36.0 36.0 15 35.09698448451209 36.0 36.0 36.0 36.0 36.0 16 35.09860155441672 36.0 36.0 36.0 36.0 36.0 17 35.089652517488844 36.0 36.0 36.0 36.0 36.0 18 35.08740009133246 36.0 36.0 36.0 36.0 36.0 19 35.06231013768258 36.0 36.0 36.0 36.0 36.0 20 35.04123197342093 36.0 36.0 36.0 36.0 36.0 21 35.017495460953164 36.0 36.0 36.0 36.0 36.0 22 35.005910136800146 36.0 36.0 36.0 36.0 36.0 23 34.950235942191405 36.0 36.0 36.0 32.0 36.0 24 34.94453317861232 36.0 36.0 36.0 32.0 36.0 25 34.91788461665737 36.0 36.0 36.0 32.0 36.0 26 34.863387375383034 36.0 36.0 36.0 32.0 36.0 27 34.843433218101474 36.0 36.0 36.0 32.0 36.0 28 34.828223274776136 36.0 36.0 36.0 32.0 36.0 29 34.78897017134764 36.0 36.0 36.0 32.0 36.0 30 34.76340921575419 36.0 36.0 36.0 32.0 36.0 31 34.74605604812824 36.0 36.0 36.0 32.0 36.0 32 34.7027657851834 36.0 36.0 36.0 32.0 36.0 33 34.667517852848846 36.0 36.0 36.0 32.0 36.0 34 34.63656188436075 36.0 36.0 36.0 32.0 36.0 35 34.577550966381274 36.0 36.0 36.0 32.0 36.0 36 34.540766486722596 36.0 36.0 36.0 32.0 36.0 37 34.51351896913448 36.0 36.0 36.0 32.0 36.0 38 34.456250868651125 36.0 36.0 36.0 32.0 36.0 39 34.38501375502163 36.0 36.0 36.0 32.0 36.0 40 34.336656084749464 36.0 36.0 36.0 32.0 36.0 41 34.321237665154015 36.0 36.0 36.0 32.0 36.0 42 34.2276318198765 36.0 36.0 36.0 32.0 36.0 43 34.22999786008484 36.0 36.0 36.0 32.0 36.0 44 34.1901689650532 36.0 36.0 36.0 32.0 36.0 45 34.08530981338616 36.0 36.0 36.0 32.0 36.0 46 34.1042789478677 36.0 36.0 36.0 32.0 36.0 47 34.04285235247271 36.0 36.0 36.0 32.0 36.0 48 34.001626997346065 36.0 36.0 36.0 32.0 36.0 49 34.001626997346065 36.0 36.0 36.0 32.0 36.0 50 33.43917236023817 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 6.0 21 34.0 22 95.0 23 229.0 24 739.0 25 1759.0 26 3624.0 27 6664.0 28 11427.0 29 17219.0 30 23807.0 31 33477.0 32 48857.0 33 72989.0 34 150738.0 35 534912.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.24492894006959 18.03086434735409 12.08140173738827 25.64280497518805 2 15.351760152050486 21.341119706665225 37.27432074224994 26.03279939903435 3 18.50103301340987 25.763012494333044 28.697145617938364 27.038808874318725 4 12.209442772097681 16.543216957853552 36.1294186814799 35.11792158856887 5 13.568385731839951 37.61297979875973 33.78319350348233 15.03544096591799 6 33.233543502336275 35.55999964702197 17.48465648619194 13.721800364449818 7 28.8118617482445 31.13389029956606 21.793932789015397 18.260315163174045 8 28.007187467597934 32.95877464487336 20.349710670234664 18.684327217294044 9 27.514345152871567 14.619260560040063 18.79573517116012 39.070659115928244 10 15.58575213605448 27.58758760967065 32.38485822510584 24.44180202916903 11 36.52504252254081 21.625276589548832 22.255007291154207 19.594673596756156 12 24.221633439152505 24.387862930713077 29.49685520716364 21.893648422970777 13 30.221668736722044 20.22021271197845 25.25563161691548 24.302486934384024 14 23.735188808905576 19.854331342697485 25.7278469144409 30.68263293395604 15 24.981634233347823 27.296823880570674 24.140890248825805 23.580651637255702 16 25.024984060941254 25.944926967122523 25.282104794071774 23.747984177864453 17 23.32000114717101 26.001292773484465 26.779714486784368 23.898991592560154 18 24.418858608966907 24.43595586921368 28.399542014035195 22.745643507784216 19 24.615311644447583 26.475603864201425 26.191348124485703 22.71773636686529 20 24.871219023625105 24.22825173344158 27.550414856747018 23.350114386186295 21 25.746929662974395 25.086313588020005 24.956595019954158 24.210161729051443 22 24.6271142692631 25.705565323667685 25.595811943373874 24.071508463695345 23 23.415414889838495 25.14179695514341 26.09339736900741 25.34939078601069 24 23.62212628146723 26.228962097028607 26.154065066657257 23.99484655484691 25 24.65634506903984 24.888316283871877 25.925072084255298 24.530266562832985 26 23.168221598141585 25.50117033504012 26.899395308511785 24.43121275830651 27 24.96001447200351 25.80958284891096 25.99279929581349 23.23760338327204 28 23.81008583927693 24.739845881986987 26.59263736821321 24.85743091052287 29 23.366880731718616 25.87510396237279 27.103459382424898 23.654555923483695 30 24.475334720233672 25.122603901705094 26.93447226824388 23.467589109817357 31 23.472552830534163 25.402116530513645 26.21936557030945 24.905965068642743 32 23.437255260992433 25.927829706875745 26.293380161442258 24.34153487068956 33 23.151675862418898 25.340235478910806 26.680770987162717 24.827317671507583 34 23.392912689255642 26.051150590462157 27.305096748432018 23.250839971850187 35 24.91346580217036 25.426824829192856 26.31301443449984 23.34669493413694 36 23.529028941800924 26.15075591951272 26.397507991590352 23.922707147096002 37 24.70079794568145 25.844439198833413 25.999638199912194 23.455124655572934 38 23.755705521201705 25.882163476281132 25.836607550591346 24.525523451925814 39 23.85994365625462 25.6446770162082 26.242198685606756 24.253180641930424 40 24.88611018577552 25.529408390673495 25.836828160400984 23.74765326315 41 23.27907802748357 25.680195195559563 26.897078905510615 24.14364787144625 42 24.93078367222677 26.021478571066144 26.19101720977125 22.85672054693584 43 23.923589586334547 24.955712580715613 26.132886524932218 24.987811308017623 44 23.563333767199293 25.572316998647658 26.86773780082905 23.996611433323995 45 23.91862586561774 25.786087904184747 26.2671275940956 24.028158636101914 46 23.291483560120717 25.321539506891867 26.89713824323609 24.489838689751327 47 24.14905281178233 24.925268426985873 27.119343288718678 23.806335472513123 48 23.74544716505364 27.193909404375578 25.37354756016581 23.687095870404974 49 23.013243206872435 25.780903573658303 27.05867559106883 24.147177628400424 50 22.91242452386888 27.40404024805367 25.088299076306726 24.595236151770724 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 80.0 1 68.5 2 57.0 3 199.0 4 341.0 5 369.0 6 397.0 7 343.5 8 290.0 9 409.0 10 528.0 11 730.0 12 932.0 13 1603.0 14 2274.0 15 3069.5 16 3865.0 17 4337.0 18 4809.0 19 5224.5 20 5640.0 21 6191.5 22 6743.0 23 7027.0 24 7311.0 25 7771.0 26 8231.0 27 9739.0 28 11247.0 29 12786.5 30 14326.0 31 15974.5 32 17623.0 33 20492.0 34 23361.0 35 26532.0 36 29703.0 37 33600.0 38 37497.0 39 39347.5 40 41198.0 41 44297.5 42 47397.0 43 49367.5 44 51338.0 45 58555.5 46 65773.0 47 70730.5 48 75688.0 49 73676.0 50 71664.0 51 65833.5 52 60003.0 53 57886.5 54 55770.0 55 55359.5 56 54949.0 57 53545.5 58 52142.0 59 47388.0 60 42634.0 61 37717.5 62 32801.0 63 28402.0 64 24003.0 65 20606.5 66 17210.0 67 14815.0 68 12420.0 69 11062.5 70 9705.0 71 7648.0 72 5591.0 73 4967.0 74 4343.0 75 3232.0 76 2121.0 77 1866.5 78 1612.0 79 1396.0 80 1180.0 81 960.0 82 740.0 83 620.5 84 501.0 85 419.5 86 338.0 87 237.5 88 137.0 89 85.0 90 33.0 91 22.5 92 12.0 93 10.0 94 8.0 95 7.0 96 6.0 97 5.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01764878477086362 2 0.004081281478262213 3 7.721343337252834E-4 4 1.1030490481789763E-4 5 0.0 6 6.618294289073858E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.2060980963579526E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 906578.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.023668469402374 #Duplication Level Percentage of deduplicated Percentage of total 1 83.19592359888432 52.43312306901814 2 11.37295753472676 14.335310103704218 3 2.6462832195732995 5.00335428919591 4 0.9562056931737707 2.410543623805552 5 0.44914731584616713 1.4153455763905394 6 0.25155697756522805 0.9512426133141492 7 0.17537840633189627 0.7737093376147497 8 0.12647932736654863 0.6376952956945897 9 0.08511288419500716 0.48277135763826906 >10 0.5877734304155768 7.237007933164026 >50 0.08170017160786112 3.6457673480543638 >100 0.06707987384556978 8.07786055058851 >500 0.003697315833098862 1.58352651926792 >1k 7.042506348759736E-4 1.0127423825491069 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3627 0.40007588977451475 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2942 0.32451702997425486 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1287 0.14196241250063424 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1271 0.1401975340235479 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.2060980963579526E-4 2 0.0 0.0 0.0 0.0 2.2060980963579526E-4 3 0.0 0.0 0.0 0.0 2.2060980963579526E-4 4 0.0 0.0 0.0 0.0 2.2060980963579526E-4 5 0.0 0.0 0.0 0.0 2.2060980963579526E-4 6 0.0 0.0 0.0 0.0 3.309147144536929E-4 7 0.0 0.0 0.0 0.0 3.309147144536929E-4 8 0.0 0.0 0.0 0.0 3.309147144536929E-4 9 0.0 0.0 0.0 0.0 3.309147144536929E-4 10 0.0 0.0 0.0 0.0 3.309147144536929E-4 11 0.0 0.0 0.0 0.0 3.309147144536929E-4 12 0.0 0.0 0.0 0.0 4.412196192715905E-4 13 0.0 0.0 0.0 0.0 4.412196192715905E-4 14 0.0 0.0 0.0 0.0 4.412196192715905E-4 15 0.0 0.0 0.0 0.0 5.515245240894881E-4 16 0.0 0.0 0.0 2.2060980963579526E-4 5.515245240894881E-4 17 0.0 0.0 0.0 2.2060980963579526E-4 5.515245240894881E-4 18 0.0 0.0 0.0 2.2060980963579526E-4 5.515245240894881E-4 19 0.0 0.0 0.0 4.412196192715905E-4 5.515245240894881E-4 20 0.0 0.0 0.0 6.618294289073858E-4 6.618294289073858E-4 21 0.0 0.0 0.0 0.001213353952996874 6.618294289073858E-4 22 0.0 0.0 0.0 0.0016545735722684645 6.618294289073858E-4 23 0.0 0.0 0.0 0.004963720716805393 6.618294289073858E-4 24 0.0 0.0 0.0 0.0077213433372528345 6.618294289073858E-4 25 0.0 0.0 0.0 0.010809880672153969 6.618294289073858E-4 26 0.0 0.0 0.0 0.013346893482965614 6.618294289073858E-4 27 0.0 0.0 0.0 0.01820030929495311 6.618294289073858E-4 28 0.0 0.0 0.0 0.028127750728563897 6.618294289073858E-4 29 0.0 0.0 0.0 0.04368074230788746 6.618294289073858E-4 30 0.0 0.0 0.0 0.07026422436900079 6.618294289073858E-4 31 0.0 0.0 0.0 0.13104222692366238 6.618294289073858E-4 32 0.0 0.0 0.0 0.20384346410347481 6.618294289073858E-4 33 0.0 0.0 0.0 0.2749901277110188 6.618294289073858E-4 34 0.0 0.0 0.0 0.35176234146427554 6.618294289073858E-4 35 0.0 0.0 0.0 0.438572301555961 6.618294289073858E-4 36 0.0 0.0 0.0 0.5666362960495401 6.618294289073858E-4 37 0.0 0.0 0.0 0.7512867067147008 6.618294289073858E-4 38 0.0 0.0 0.0 0.9979284738875199 6.618294289073858E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACCGT 55 1.5932573E-4 23.99985 6 ACGAACC 55 1.5932573E-4 23.99985 26 ACCGTCG 175 0.0 22.62843 8 CGTCGTA 160 0.0 21.999863 10 TAGGACG 290 0.0 21.999863 4 TACCGTC 170 0.0 20.705751 7 ATACCGT 195 0.0 20.307566 6 ATCGTTT 220 0.0 19.999874 29 CCGTCGT 200 0.0 19.799875 9 TGTAGGA 460 0.0 19.610735 2 TTAGGAC 260 0.0 19.462492 3 CCTAGTA 80 8.978236E-5 19.252003 2 CGCATCG 230 0.0 19.130316 13 ATGGTCG 255 0.0 18.980274 36 AGGACGT 350 0.0 18.857023 5 GCATTAT 120 3.1563468E-7 18.335241 1 GCACCGC 60 0.0074109756 18.33322 6 GGACGTG 365 0.0 18.082077 6 CGAGCCG 280 0.0 18.071314 15 GTCGTAG 195 1.8189894E-12 18.051168 11 >>END_MODULE