##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062461_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 392729 Sequences flagged as poor quality 0 Sequence length 25 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.644780497493183 32.0 32.0 32.0 32.0 32.0 2 30.611210274769626 32.0 32.0 32.0 32.0 32.0 3 30.665960496933 32.0 32.0 32.0 32.0 32.0 4 30.594684884487776 32.0 32.0 32.0 32.0 32.0 5 30.609695235136698 32.0 32.0 32.0 32.0 32.0 6 34.061854357585 36.0 36.0 36.0 32.0 36.0 7 33.74653514255377 36.0 36.0 36.0 32.0 36.0 8 33.704119125401995 36.0 36.0 36.0 27.0 36.0 9 33.780293790374536 36.0 36.0 36.0 32.0 36.0 10 33.688515490325386 36.0 36.0 36.0 27.0 36.0 11 34.04503869080205 36.0 36.0 36.0 32.0 36.0 12 33.849939780357445 36.0 36.0 36.0 32.0 36.0 13 33.90746036070675 36.0 36.0 36.0 32.0 36.0 14 33.859238813533 36.0 36.0 36.0 32.0 36.0 15 33.91138927861197 36.0 36.0 36.0 32.0 36.0 16 33.82232022590642 36.0 36.0 36.0 32.0 36.0 17 33.75906795780296 36.0 36.0 36.0 32.0 36.0 18 33.853761754288584 36.0 36.0 36.0 32.0 36.0 19 33.78150072951068 36.0 36.0 36.0 32.0 36.0 20 33.64230041580836 36.0 36.0 36.0 27.0 36.0 21 33.518561145217184 36.0 36.0 36.0 27.0 36.0 22 33.480336313335656 36.0 36.0 36.0 27.0 36.0 23 33.430294172317296 36.0 36.0 36.0 27.0 36.0 24 33.45102857186508 36.0 36.0 36.0 27.0 36.0 25 32.87779868560763 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 10.0 5 39.0 6 72.0 7 14.0 8 47.0 9 78.0 10 48.0 11 9.0 12 30.0 13 18.0 14 173.0 15 196.0 16 298.0 17 433.0 18 635.0 19 893.0 20 1231.0 21 1709.0 22 2390.0 23 3111.0 24 3854.0 25 4672.0 26 5673.0 27 6761.0 28 8754.0 29 11409.0 30 14734.0 31 19856.0 32 27945.0 33 39532.0 34 84294.0 35 153809.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.323055846275686 19.484444987687898 13.315406299417118 21.877092866619304 2 11.67778569973518 23.59161743735995 40.765430841311876 23.965166021592992 3 18.628314753230086 30.62483130216901 29.97066567527514 20.77618826932577 4 10.235540694372643 19.089772353955347 38.551102576966464 32.123584374705544 5 9.432318637177564 42.15824369518871 36.29217747461137 12.11726019302236 6 27.40764516178336 37.86994156337088 21.388723309948492 13.333689964897264 7 24.428607100814855 35.3035453113932 23.625726821959834 16.642120765832104 8 27.234197635953084 33.55310440442634 23.087685853946958 16.125012105673612 9 26.532401531254617 17.158054633778335 21.30656186441974 35.00298197054731 10 15.023109141940862 29.012488878805105 35.24163265514226 20.72276932411177 11 31.022132263343856 24.674593018216672 24.20808712188805 20.095187596551426 12 21.308027097797346 28.884344826355335 31.67953820539559 18.128089870451724 13 29.120897329679433 22.957364094066662 27.78586450831687 20.135874067937035 14 22.575217584165685 23.26914154315228 28.20665779504515 25.948983077636882 15 24.42841884427042 28.010216957396207 30.511179258148967 17.050184940184405 16 22.470105710185344 28.216233026339605 30.13364805926092 19.180013204214134 17 19.3163190646996 27.998337832911417 32.4099638249218 20.275379277467184 18 21.234881396724386 25.361010830324908 35.61310652878908 17.79100124416162 19 20.174488123130892 33.26925577399148 29.159963593068404 17.39629250980922 20 19.41165673262733 26.53765162369281 36.08758610492181 17.96310553875805 21 20.965706433198804 28.92785118973258 27.211260711162556 22.895181665906062 22 18.69337379352552 31.420229246088923 28.33955961290816 21.546837347477403 23 18.942073069676006 30.439749006249343 28.625373214244735 21.992804709829908 24 18.298798879191878 34.02835675149216 28.493410535494384 19.179433833821584 25 22.19576368846691 28.841643125936955 28.17799851107009 20.78459467452604 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 224.0 1 224.0 2 573.0 3 922.0 4 922.0 5 922.0 6 3192.0 7 5462.0 8 5462.0 9 5462.0 10 5016.5 11 4571.0 12 4571.0 13 4571.0 14 3756.0 15 2941.0 16 2941.0 17 2941.0 18 4863.0 19 6785.0 20 6785.0 21 6785.0 22 10332.0 23 13879.0 24 13879.0 25 13879.0 26 20337.5 27 26796.0 28 26796.0 29 26796.0 30 31138.5 31 35481.0 32 35481.0 33 35481.0 34 36055.0 35 36629.0 36 36629.0 37 36629.0 38 35011.0 39 33393.0 40 33393.0 41 33393.0 42 37055.5 43 40718.0 44 40718.0 45 40718.0 46 66932.0 47 93146.0 48 93146.0 49 93146.0 50 69964.0 51 46782.0 52 46782.0 53 46782.0 54 33015.0 55 19248.0 56 19248.0 57 19248.0 58 14688.5 59 10129.0 60 10129.0 61 10129.0 62 8149.0 63 6169.0 64 6169.0 65 6169.0 66 5134.5 67 4100.0 68 4100.0 69 4100.0 70 3288.5 71 2477.0 72 2477.0 73 2477.0 74 2019.0 75 1561.0 76 1561.0 77 1561.0 78 1116.5 79 672.0 80 672.0 81 672.0 82 456.0 83 240.0 84 240.0 85 240.0 86 164.0 87 88.0 88 88.0 89 88.0 90 58.5 91 29.0 92 29.0 93 29.0 94 24.5 95 20.0 96 20.0 97 20.0 98 143.5 99 267.0 100 267.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006620341253128748 2 0.0022916565876214896 3 0.0038194276460358162 4 0.014768453564671822 5 0.03361096328511518 6 0.04252296112586542 7 0.06798581209943753 8 0.0893746069172381 9 0.09446717711195252 10 0.1171291144784317 11 0.1148374578908102 12 0.13240682506257495 13 0.11560134342001736 14 0.11891151404658175 15 0.11203654428371726 16 0.10949025918636007 17 0.11967539957578889 18 0.12655036933865338 19 0.12629574082891765 20 0.12094854212446751 21 0.12680499784838908 22 0.1461567645883039 23 0.13444385314046073 24 0.1303697969846892 25 0.12756888337759625 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 392729.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.08683850696027 #Duplication Level Percentage of deduplicated Percentage of total 1 73.029514990063 17.59050133807282 2 13.298659562772212 6.406453304950742 3 4.759186434944395 3.4390126524906486 4 2.1924817117002835 2.112398116767542 5 1.2886379973783246 1.55196076683922 6 0.8097593978603747 1.170272630745374 7 0.5454776100469364 0.9197181771654245 8 0.4313078777115311 0.8311074557773936 9 0.3393378155524547 0.7356217646264982 >10 2.4313924478836313 11.87714683662271 >50 0.4186223518964861 7.167028663531341 >100 0.38162290160260476 19.36373427987238 >500 0.04651359465516512 7.543624229430472 >1k 0.025371051630090066 13.97783204194241 >5k 0.0010571271512537527 2.4240634126840646 >10k+ 0.0010571271512537527 2.8895243284809626 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 11348 2.8895243284809626 No Hit TCCATGTACTCTGCGTTGATACCAC 9520 2.4240634126840646 No Hit GAGTACATGGAAGCAGTGGTATCAA 4847 1.23418438668904 No Hit CATGTACTCTGCGTTGATACCACTG 4260 1.0847174514741718 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3785 0.9637689093497043 No Hit GTATCAACGCAGAGTACTTTTTTTT 3685 0.9383060583761321 No Hit CCCATGTACTCTGCGTTGATACCAC 2936 0.747589304584077 No Hit TATCAACGCAGAGTACTTTTTTTTT 2818 0.7175431404352619 No Hit GTACATGGGAAGCAGTGGTATCAAC 2782 0.708376514084776 No Hit GCTTCCATGTACTCTGCGTTGATAC 2721 0.692844174990897 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2592 0.659997097234989 No Hit GCGTTGATACCACTGCTTCCATGTA 2572 0.6549045270402746 No Hit CATGGAAGCAGTGGTATCAACGCAG 2504 0.6375897883782455 No Hit GTACATGGGGTGGTATCAACGCAAA 1957 0.4983079935528061 No Hit GTATCAACGCAGAGTACATGGAAGC 1919 0.48863211018284874 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1863 0.47437291363764833 No Hit ACTCTGCGTTGATACCACTGCTTCC 1834 0.4669886868553124 No Hit CAGTGGTATCAACGCAGAGTACATG 1664 0.4237018402002399 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1606 0.40893338663556805 No Hit GGTATCAACGCAGAGTACTTTTTTT 1414 0.3600447127663096 No Hit GTATCAACGCAGAGTACATGGGAAG 1290 0.32847077755908016 No Hit TATCAACGCAGAGTACATGGAAGCA 1259 0.32057729375727284 No Hit CCATAGGGTCTTCTCGTCTTATTAT 1186 0.3019894125465652 No Hit GTATTAGAGGCACTGCCTGCCCAGT 1184 0.30148015552709373 No Hit GTACATGGGTGGTATCAACGCAAAA 1171 0.2981699849005294 No Hit GAGTACATGGGAAGCAGTGGTATCA 1046 0.26634142118356424 No Hit CTCTAATACTTGTAATGCTAGAGGT 983 0.2502998250702138 No Hit ATACCACTGCTTCCATGTACTCTGC 943 0.24011468468078498 No Hit GCGTTGATACCACTGCTTCCCATGT 932 0.23731377107369203 No Hit GGTATCAACGCAGAGTACATGGAAG 931 0.2370591425639563 No Hit GTACATGGGAGTGGTATCAACGCAA 906 0.2306934298205633 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 867 0.2207629179408702 No Hit TATCAACGCAGAGTACATGGGAAGC 842 0.21439720519747713 No Hit CCATTGGGATGTCCTGATCCAACAT 835 0.21261480562932708 No Hit GTACTCTGCGTTGATACCACTGCTT 812 0.2067583499054055 No Hit AAGCAGTGGTATCAACGCAGAGTAC 796 0.20268429374963398 No Hit GATATATTTTGATCAACGGACCAAG 752 0.19148063932126225 No Hit ATCTATAACTTTATAGATGCAACAC 752 0.19148063932126225 No Hit GTCAGGATACCGCGGCCGTTAAACT 724 0.18435104104866207 No Hit CTTCTACACCATTGGGATGTCCTGA 717 0.18256864148051202 No Hit CCACTGCTTCCATGTACTCTGCGTT 704 0.17925847085394764 No Hit ACGCAGAGTACATGGGAAGCAGTGG 696 0.17722144277606186 No Hit GTGGTATCAACGCAGAGTACATGGA 689 0.17543904320791182 No Hit GGTATCAACGCAGAGTACATGGGAA 674 0.171619615561876 No Hit GCTTCCCATGTACTCTGCGTTGATA 668 0.17009184450346168 No Hit GTATCAACGCAGAGTACATGGGGTG 666 0.16958258748399024 No Hit ATCCTGACCGTGCAAAGGTAGCATA 655 0.1667816738768973 No Hit GAAGCAGTGGTATCAACGCAGAGTA 646 0.16449001728927581 No Hit CTGCTTCCATGTACTCTGCGTTGAT 626 0.15939744709456138 No Hit GTTATATAATTTAAGCTCCATAGGG 623 0.15863356156535421 No Hit CCTCTAGCATTACAAGTATTAGAGG 618 0.1573604190166756 No Hit CTGTTAGTATGAGTAACAAGAATTC 615 0.15659653348746846 No Hit GTTATAGATTAACCCAATTTTAAGT 610 0.15532339093878986 No Hit AAAAAGTACTCTGCGTTGATACCAC 603 0.1535409913706398 No Hit GTATCCTGACCGTGCAAAGGTAGCA 601 0.15303173435116837 No Hit ACATGGAAGCAGTGGTATCAACGCA 588 0.149721563724604 No Hit GCCTAAAGGAAAGATCCAAAAAGAT 578 0.14717527862724678 No Hit GTCCTAAAGTGTGTATTTCTCATTT 556 0.1415734514130609 No Hit GTTGATACCACTGCTTCCATGTACT 556 0.1415734514130609 No Hit GTCCTACAGTGGACATTTCTAAATT 554 0.14106419439358947 No Hit TGGAAGCAGTGGTATCAACGCAGAG 554 0.14106419439358947 No Hit ATCGTAAATAGATAGAAACCGACCT 552 0.14055493737411803 No Hit GTTCATGCTAGTCCCTAATTAAGGA 551 0.1403003088643823 No Hit GGTCAGGATACCGCGGCCGTTAAAC 550 0.1400456803546466 No Hit ACCTATAACTTCTCTGTTAACCCAA 532 0.1354623671794036 No Hit GATATACACTGTTCTACAAATCCCG 520 0.13240682506257495 No Hit TATCAACGCAGAGTACATGGGGTGG 518 0.1318975680431035 No Hit GATACCACTGCTTCCATGTACTCTG 513 0.1306244254944249 No Hit ATAAATAATCCACCTATAACTTCTC 512 0.1303697969846892 No Hit TGCTAGAGGTGATGTTTTTGGTAAA 506 0.12884202592627486 No Hit CTATAGAACTAGTACCGCAAGGGAA 500 0.12731425486786052 No Hit CACTATAAATAATCCACCTATAACT 495 0.12604111231918194 No Hit GATTAAACCTTGTACCTTTTGCATA 492 0.12527722678997477 No Hit CCTATAACTTCTCTGTTAACCCAAC 477 0.12145779914393895 No Hit GTACATGGGAGAAATCGTAAATAGA 477 0.12145779914393895 No Hit GATTAAAGATAAGAGACAGTTGGAC 474 0.12069391361473178 No Hit ATCAACGCAGAGTACTTTTTTTTTT 468 0.11916614255631747 No Hit GCAGAGTACATGGAAGCAGTGGTAT 467 0.11891151404658175 No Hit CTTTAGGACGTGAAATATGGCGAGG 465 0.1184022570271103 No Hit GTGTAGAAGCTATTAATGGTTCGTT 463 0.11789300000763885 No Hit GACTATAGGCAATAATCACACTATA 463 0.11789300000763885 No Hit TTGTAGAACAGTGTATATCAATGAG 459 0.11687448596869596 No Hit AAATATATCTGGGTCAATAAGATAT 455 0.11585597192975308 No Hit CCCCATGTACTCTGCGTTGATACCA 451 0.1148374578908102 No Hit CTGTAGGACGTGGAATATGGCAAGA 451 0.1148374578908102 No Hit AGCATGAACGGCTAAACGAGGGTCC 449 0.11432820087133877 No Hit TACTAACAGTGTTGCATCTATAAAG 447 0.11381894385186732 No Hit TCCCAATGGTGTAGAAGCTATTAAT 446 0.1135643153421316 No Hit ATCCTAGCCCTAGCCCTACACAAAT 446 0.1135643153421316 No Hit GATAGAAACCGACCTGGATTGCTCC 443 0.11280042981292443 No Hit GTCCTGATCCAACATCGAGGTCGTA 437 0.1112726587545101 No Hit CCTATAGTCTGATTAACTAACAATG 433 0.11025414471556721 No Hit GTCCTACAGTGTGCATTTCTCATTT 430 0.10949025918636007 No Hit GCAGTGGTATCAACGCAGAGTACAT 428 0.10898100216688862 No Hit ACCCTATGGAGCTTAAATTATATAA 426 0.10847174514741717 No Hit GTATCAACGCAGAGTACATGGGAGA 426 0.10847174514741717 No Hit CTGTTAACCCAACACCGGAATGCCT 414 0.10541620303058852 No Hit CCAATAAAGAAAGCGTTCAAGCTCA 408 0.1038884319721742 No Hit GTGTATATCAATGAGTTACAATGAA 408 0.1038884319721742 No Hit GTTAGTATGAGTAACAAGAATTCCA 396 0.10083288985534554 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.546285097357211E-4 0.0 3 0.0 0.0 0.0 2.546285097357211E-4 0.0 4 0.0 0.0 0.0 2.546285097357211E-4 0.0 5 0.0 0.0 0.0 2.546285097357211E-4 0.0 6 0.0 0.0 0.0 2.546285097357211E-4 0.0 7 0.0 0.0 0.0 2.546285097357211E-4 0.0 8 0.0 0.0 0.0 5.092570194714422E-4 0.0 9 0.0 0.0 0.0 7.638855292071632E-4 0.0 10 0.0 0.0 0.0 0.0017823995681500475 0.0 11 0.0 0.0 0.0 0.0017823995681500475 0.0 12 0.0 0.0 0.0 0.0017823995681500475 0.0 13 0.0 0.0 0.0 0.0020370280778857688 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCCCAC 25 0.006020947 19.001785 11 CTCGGCA 60 7.633571E-8 17.418303 12 TTGAACT 45 3.5290286E-5 16.888323 9 AAGCGTT 75 3.252353E-9 16.468214 11 AAAGCGT 75 3.252353E-9 16.468214 10 GAAAGCG 75 3.25781E-9 16.466114 9 CCAATTT 105 0.0 16.287243 14 ACTCGGC 65 1.9005711E-7 16.078432 11 TCCAACG 65 1.9005711E-7 16.078432 18 AACGGAC 125 0.0 15.9615 15 GGACCAA 125 0.0 15.9615 18 CGGACCA 125 0.0 15.9615 17 GGCAAAC 60 1.4585676E-6 15.834821 15 GCGTTCA 85 1.0095391E-9 15.648529 13 GTTTAAA 55 1.1284645E-5 15.53899 1 AGCGTTC 80 7.6452125E-9 15.4389515 12 GAACTCG 80 7.657945E-9 15.436982 9 ACGGACC 130 0.0 15.347595 16 GAACTTA 50 8.680534E-5 15.201428 11 TGAACTT 50 8.680534E-5 15.201428 10 >>END_MODULE