##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062460_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1402883 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.09462870389049 32.0 32.0 32.0 32.0 32.0 2 31.374405420836947 32.0 32.0 32.0 32.0 32.0 3 31.475458038909874 32.0 32.0 32.0 32.0 32.0 4 31.58873049284937 32.0 32.0 32.0 32.0 32.0 5 31.51810664182259 32.0 32.0 32.0 32.0 32.0 6 35.09317455554027 36.0 36.0 36.0 36.0 36.0 7 35.1108488733558 36.0 36.0 36.0 36.0 36.0 8 35.06162951578998 36.0 36.0 36.0 36.0 36.0 9 35.16774028910465 36.0 36.0 36.0 36.0 36.0 10 35.05451202986992 36.0 36.0 36.0 36.0 36.0 11 35.17631833873531 36.0 36.0 36.0 36.0 36.0 12 35.08206600265311 36.0 36.0 36.0 36.0 36.0 13 35.122391532294564 36.0 36.0 36.0 36.0 36.0 14 35.07481023007621 36.0 36.0 36.0 36.0 36.0 15 35.05390684754181 36.0 36.0 36.0 36.0 36.0 16 35.06721301776413 36.0 36.0 36.0 36.0 36.0 17 35.04550842800148 36.0 36.0 36.0 36.0 36.0 18 35.05486843877929 36.0 36.0 36.0 36.0 36.0 19 35.01742055467206 36.0 36.0 36.0 36.0 36.0 20 34.98736530416293 36.0 36.0 36.0 36.0 36.0 21 34.9764827145243 36.0 36.0 36.0 36.0 36.0 22 34.97050644993203 36.0 36.0 36.0 36.0 36.0 23 34.94563552341856 36.0 36.0 36.0 32.0 36.0 24 34.9277088680952 36.0 36.0 36.0 32.0 36.0 25 34.90575265364254 36.0 36.0 36.0 32.0 36.0 26 34.86147027228928 36.0 36.0 36.0 32.0 36.0 27 34.84828029137141 36.0 36.0 36.0 32.0 36.0 28 34.83359980839457 36.0 36.0 36.0 32.0 36.0 29 34.808103027836246 36.0 36.0 36.0 32.0 36.0 30 34.78468767530863 36.0 36.0 36.0 32.0 36.0 31 34.77935365957104 36.0 36.0 36.0 32.0 36.0 32 34.73198406424484 36.0 36.0 36.0 32.0 36.0 33 34.687939764043044 36.0 36.0 36.0 32.0 36.0 34 34.65261465140001 36.0 36.0 36.0 32.0 36.0 35 34.611246269289744 36.0 36.0 36.0 32.0 36.0 36 34.58114753689367 36.0 36.0 36.0 32.0 36.0 37 34.553511590061326 36.0 36.0 36.0 32.0 36.0 38 34.52446497676571 36.0 36.0 36.0 32.0 36.0 39 34.47951753638757 36.0 36.0 36.0 32.0 36.0 40 34.4557272416873 36.0 36.0 36.0 32.0 36.0 41 34.41125453797644 36.0 36.0 36.0 32.0 36.0 42 34.366451799615504 36.0 36.0 36.0 32.0 36.0 43 34.3465028801404 36.0 36.0 36.0 32.0 36.0 44 34.302679553462404 36.0 36.0 36.0 32.0 36.0 45 34.22147677318779 36.0 36.0 36.0 32.0 36.0 46 34.21191931187419 36.0 36.0 36.0 32.0 36.0 47 34.14410325023541 36.0 36.0 36.0 32.0 36.0 48 34.07736069223164 36.0 36.0 36.0 32.0 36.0 49 34.03418104004397 36.0 36.0 36.0 32.0 36.0 50 33.50580055499995 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 13.0 21 50.0 22 138.0 23 432.0 24 1167.0 25 2754.0 26 5673.0 27 10573.0 28 17901.0 29 26044.0 30 36138.0 31 49546.0 32 71720.0 33 112992.0 34 238584.0 35 829152.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.023398233369214 18.428354495355286 11.888897602429651 25.65934966884584 2 16.055416353313113 21.126932247912265 36.581137482312606 26.236513916462023 3 18.25604222177552 25.57827551647399 28.812697896752248 27.35298436499824 4 12.359129278157393 16.09401218349084 35.82952807149853 35.717330466853234 5 14.145584485662738 37.228193655493726 32.997548619521375 15.628673239322167 6 33.31301790964983 35.56852891383765 17.305176868929877 13.813276307582642 7 29.279490877001145 30.962239901688164 21.438993843392502 18.31927537791819 8 28.562253587790288 31.917772187702038 19.968521965124676 19.551452259382998 9 28.01074644143525 13.712904069690774 19.149351727834752 39.126997761039235 10 16.340920803801882 26.783701848265324 31.401121832683128 25.474255515249666 11 37.10387822790639 21.341266520443973 22.309130554721953 19.245724696927685 12 24.587937839434932 24.217914109729747 28.886086722841466 22.30806132799385 13 29.851242049408256 19.65039137262338 25.697153647168008 24.80121293080036 14 23.912329110838183 19.599638743929464 25.685107026031396 30.802925119200957 15 25.38101894455917 26.715342619448663 23.362390163684353 24.54124827230781 16 25.253638400351274 25.689597778289425 24.47203366210867 24.58473015925063 17 23.48841635403665 25.635780032974953 25.939226578410317 24.936577034578082 18 24.520719119128252 24.535617011539806 27.34376280844518 23.59990106088676 19 25.125901447234018 25.096675916665895 26.335553285626812 23.441869350473276 20 25.53612810191584 23.8158135781815 26.27204121797755 24.376017101925108 21 26.785555174594034 23.947185902174308 25.193832985359432 24.073425937872226 22 25.544468070395038 24.302881993722927 25.619456504925925 24.53319343095611 23 24.293045107824387 24.161744065613455 26.253080263999205 25.292130562562953 24 24.380721699528756 25.343667290857468 25.858892010238915 24.416718999374858 25 24.603691113228972 24.44074095986622 26.15471140501382 24.800856521890992 26 23.928367511759713 25.1815725188772 26.660812056315457 24.22924791304763 27 24.839776374793907 25.123335303086574 25.824320346030284 24.21256797608924 28 23.985321655476614 24.75537874505572 26.603715349034808 24.655584250432856 29 23.988671899224666 25.073438055775142 26.478116849373755 24.459773195626436 30 24.108710419899595 25.18228533669593 26.600293823504884 24.108710419899595 31 24.29404305277062 25.049701222411276 25.709556677213996 24.946699047604113 32 24.085258713663222 25.34487908114932 25.63428311555561 24.93557908963185 33 23.898144036245363 24.757588480293798 26.13418225183426 25.21008523162659 34 24.355773075873042 25.073509337557017 26.565864722859995 24.004852863709946 35 25.270532182655288 24.854888112551084 26.061617397887066 23.812962306906563 36 24.111704254738278 25.480385748490786 25.670993233220447 24.736916763550486 37 25.069588839553976 25.343453445511848 25.498348757522898 24.088608957411275 38 24.089036648102518 25.232467711134852 25.89531700077626 24.78317863998637 39 24.343726454736426 25.146430600413577 25.60035298738384 24.90948995746616 40 24.812190325208874 25.201602699583642 26.00252480071396 23.983682174493527 41 23.68886072466485 25.534631184496497 26.47640608660879 24.300102004229863 42 24.86679217012395 25.81583781398734 25.861030463695116 23.45633955219359 43 24.11519706205008 24.767425366192334 25.9142779547546 25.203099617002987 44 23.623851739596248 25.422433659827654 25.963177257119803 24.990537343456296 45 23.923163941682947 25.50982512440453 25.828312125815195 24.738698808097325 46 23.711188824149144 25.23341236112517 26.036045797151864 25.019353017573824 47 23.98517909191287 25.055617610306776 26.286582701479738 24.672620596300618 48 24.47039418112558 26.077228108117357 25.104588194453846 24.347789516303212 49 23.50645064485064 25.816336786460454 25.778129751376273 24.899082817312635 50 23.358469665681312 26.38053208998897 25.22284467058194 25.038153573747774 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 46.0 2 52.0 3 177.5 4 303.0 5 353.5 6 404.0 7 409.0 8 414.0 9 582.0 10 750.0 11 1112.5 12 1475.0 13 2587.5 14 3700.0 15 5158.0 16 6616.0 17 7941.0 18 9266.0 19 10058.5 20 10851.0 21 11543.0 22 12235.0 23 12528.5 24 12822.0 25 12799.5 26 12777.0 27 14461.5 28 16146.0 29 18127.5 30 20109.0 31 22360.0 32 24611.0 33 28105.5 34 31600.0 35 35595.5 36 39591.0 37 46286.5 38 52982.0 39 56350.0 40 59718.0 41 65241.0 42 70764.0 43 72462.0 44 74160.0 45 81901.5 46 89643.0 47 95168.0 48 100693.0 49 102276.0 50 103859.0 51 99273.5 52 94688.0 53 92377.0 54 90066.0 55 91021.5 56 91977.0 57 89912.5 58 87848.0 59 79807.0 60 71766.0 61 63940.0 62 56114.0 63 49329.0 64 42544.0 65 36949.5 66 31355.0 67 27570.5 68 23786.0 69 21504.5 70 19223.0 71 15500.0 72 11777.0 73 10571.0 74 9365.0 75 7180.0 76 4995.0 77 4458.0 78 3921.0 79 3403.0 80 2885.0 81 2353.0 82 1821.0 83 1673.5 84 1526.0 85 1249.0 86 972.0 87 711.5 88 451.0 89 294.5 90 138.0 91 90.5 92 43.0 93 29.0 94 15.0 95 14.0 96 13.0 97 11.5 98 10.0 99 6.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01518301953904923 2 0.003421525529926587 3 3.564089093673528E-4 4 7.128178187347056E-5 5 0.0 6 5.702542549877645E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.128178187347056E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1402883.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.065290149748975 #Duplication Level Percentage of deduplicated Percentage of total 1 75.86081951797716 40.25576398719199 2 14.238629115826862 15.111539707320324 3 4.630621121516091 7.371757601604223 4 1.9046256744134091 4.042780561576357 5 0.9904393076181132 2.6278974617235833 6 0.5799581435145846 1.8465388296186718 7 0.3456807544806756 1.2840554674990834 8 0.2262278670786412 0.9603877925189553 9 0.16244833699689815 0.7758331323376141 >10 0.8725220042520061 8.550706142570025 >50 0.09193309895704456 3.4347446845470206 >100 0.08595847985961404 9.48994394210847 >500 0.007838953273634921 2.7605767095788627 >1k 0.0022976242353757526 1.4874739798047754 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1970 0.14042511029073698 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1483 0.10571088251835684 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1481 0.1055683189546099 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.128178187347056E-5 2 0.0 0.0 0.0 0.0 7.128178187347056E-5 3 0.0 0.0 0.0 0.0 7.128178187347056E-5 4 0.0 0.0 0.0 7.128178187347056E-5 7.128178187347056E-5 5 0.0 0.0 0.0 7.128178187347056E-5 7.128178187347056E-5 6 0.0 0.0 0.0 7.128178187347056E-5 7.128178187347056E-5 7 0.0 0.0 0.0 7.128178187347056E-5 7.128178187347056E-5 8 0.0 0.0 0.0 7.128178187347056E-5 7.128178187347056E-5 9 0.0 0.0 0.0 7.128178187347056E-5 7.128178187347056E-5 10 0.0 0.0 0.0 7.128178187347056E-5 7.128178187347056E-5 11 0.0 0.0 0.0 1.4256356374694112E-4 7.128178187347056E-5 12 0.0 0.0 0.0 1.4256356374694112E-4 2.8512712749388224E-4 13 0.0 0.0 0.0 1.4256356374694112E-4 2.8512712749388224E-4 14 0.0 0.0 0.0 2.1384534562041168E-4 2.8512712749388224E-4 15 0.0 0.0 0.0 2.1384534562041168E-4 2.8512712749388224E-4 16 0.0 0.0 0.0 3.564089093673528E-4 2.8512712749388224E-4 17 0.0 0.0 0.0 4.2769069124082336E-4 2.8512712749388224E-4 18 0.0 0.0 0.0 4.2769069124082336E-4 3.564089093673528E-4 19 0.0 0.0 0.0 5.702542549877645E-4 3.564089093673528E-4 20 0.0 0.0 0.0 7.840996006081762E-4 4.2769069124082336E-4 21 0.0 0.0 0.0 0.001140508509975529 4.2769069124082336E-4 22 0.0 0.0 0.0 0.0019246081105837051 4.2769069124082336E-4 23 0.0 0.0 0.0 0.0034928073118000572 6.41536036861235E-4 24 0.0 0.0 0.0 0.006058951459244998 6.41536036861235E-4 25 0.0 0.0 0.0 0.00762715066046135 7.840996006081762E-4 26 0.0 0.0 0.0 0.009052786297930762 8.553813824816467E-4 27 0.0 0.0 0.0 0.011761494009122643 8.553813824816467E-4 28 0.0 0.0 0.0 0.021241970998294227 8.553813824816467E-4 29 0.0 0.0 0.0 0.04291163268782928 8.553813824816467E-4 30 0.0 0.0 0.0 0.08354224835570749 8.553813824816467E-4 31 0.0 0.0 0.0 0.16409066187272922 8.553813824816467E-4 32 0.0 0.0 0.0 0.26417028362308187 8.553813824816467E-4 33 0.0 0.0 0.0 0.35754941787732836 8.553813824816467E-4 34 7.128178187347056E-5 0.0 0.0 0.46233363723133003 8.553813824816467E-4 35 7.128178187347056E-5 0.0 0.0 0.5783090963394667 8.553813824816467E-4 36 7.128178187347056E-5 0.0 0.0 0.7540186886575716 8.553813824816467E-4 37 7.128178187347056E-5 0.0 0.0 0.9951649567355225 8.553813824816467E-4 38 7.128178187347056E-5 0.0 0.0 1.2909843515104253 9.266631643551173E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTGCGT 50 0.002580716 21.999893 8 ATCGATT 55 0.0044840914 19.999903 29 ATCGTTT 425 0.0 19.670492 29 ATACCGT 340 0.0 19.41167 6 CGCCGTT 80 8.9902154E-5 19.249907 25 CGTCGTA 345 0.0 19.130342 10 ATAATAC 170 1.2732926E-10 18.11756 3 ACCGTCG 365 0.0 18.082104 8 CATCGTT 485 0.0 17.23703 28 TGGTCGG 455 0.0 16.922995 37 TTAGAGT 365 0.0 16.87663 4 TACCGTC 380 0.0 16.78939 7 CCGTCGT 375 0.0 16.426586 9 ATAACGC 500 0.0 16.27992 3 CGTTTAT 500 0.0 16.27992 31 GTCGTAG 380 0.0 16.210447 11 CGCAATA 435 0.0 16.18383 36 GGACCGT 150 1.8382889E-7 16.133255 6 GACGGTA 400 0.0 15.949923 8 GATATAC 235 3.6379788E-12 15.917651 1 >>END_MODULE