##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062459_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1684899 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.110587044089883 32.0 32.0 32.0 32.0 32.0 2 30.72346176239644 32.0 32.0 32.0 32.0 32.0 3 30.694740159499176 32.0 32.0 32.0 32.0 32.0 4 30.781763773377513 32.0 32.0 32.0 32.0 32.0 5 30.530828850868804 32.0 32.0 32.0 32.0 32.0 6 34.17507399553326 36.0 36.0 36.0 32.0 36.0 7 34.054842456432105 36.0 36.0 36.0 32.0 36.0 8 34.03592322151061 36.0 36.0 36.0 32.0 36.0 9 34.24226021856503 36.0 36.0 36.0 32.0 36.0 10 33.84340663743049 36.0 36.0 36.0 32.0 36.0 11 34.223151061280234 36.0 36.0 36.0 32.0 36.0 12 33.95903018519211 36.0 36.0 36.0 32.0 36.0 13 34.105099474805314 36.0 36.0 36.0 32.0 36.0 14 33.99022374634919 36.0 36.0 36.0 32.0 36.0 15 33.90705021487935 36.0 36.0 36.0 32.0 36.0 16 33.91977204568345 36.0 36.0 36.0 32.0 36.0 17 33.824762789935775 36.0 36.0 36.0 32.0 36.0 18 33.8477534855205 36.0 36.0 36.0 32.0 36.0 19 33.833714661828395 36.0 36.0 36.0 32.0 36.0 20 33.827369474372055 36.0 36.0 36.0 32.0 36.0 21 33.804625677859626 36.0 36.0 36.0 32.0 36.0 22 33.74166938196296 36.0 36.0 36.0 32.0 36.0 23 33.70859024784275 36.0 36.0 36.0 27.0 36.0 24 33.67424634948445 36.0 36.0 36.0 27.0 36.0 25 33.204819992177576 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 7.0 4 68.0 5 169.0 6 302.0 7 85.0 8 267.0 9 334.0 10 204.0 11 62.0 12 121.0 13 87.0 14 313.0 15 351.0 16 591.0 17 843.0 18 1095.0 19 1542.0 20 2441.0 21 3688.0 22 5591.0 23 8424.0 24 11767.0 25 16767.0 26 22638.0 27 29186.0 28 39089.0 29 51497.0 30 66338.0 31 89682.0 32 128107.0 33 181288.0 34 386132.0 35 635822.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.33496046335218 17.36146147298794 11.354039670791078 25.949538392868803 2 16.935326395009632 19.965456763085033 36.48941000507465 26.609806836830685 3 19.06066543172579 23.66219519939982 28.36397241028922 28.913166958585162 4 12.65993801632043 15.194252530367075 35.32903527584874 36.81677417746375 5 14.851027801889716 36.235968731928416 33.12501410103107 15.7879893651508 6 34.58620855509233 34.82271849260691 16.795055796274866 13.796017156025897 7 30.38315407353997 30.360465717121333 20.674853876887752 18.58152633245094 8 28.54853158884012 32.083637296859294 19.6158059449325 19.752025169368082 9 27.315767023007066 14.356573286233187 18.680483026006076 39.64717666475367 10 16.270883076166108 26.073524116038417 30.855669821288288 26.79992298650719 11 37.588275703056105 21.002902312579778 21.911746878409506 19.497075105954615 12 24.768926291766217 23.662827324703727 28.159493159314863 23.408753224215193 13 29.45943087102191 18.92158342554175 25.342260613674263 26.27672508976207 14 23.866157969490054 19.7527826805251 24.45240769463907 31.92865165534578 15 25.451765616077516 26.870806710095746 22.315269443109116 25.362158230717625 16 26.2624522040364 25.424095404754194 23.607447702971296 24.70600468823811 17 24.235545109598363 25.52350786071485 25.284551637661306 24.95639539202548 18 25.463863240873692 24.0064827933779 26.329959206184682 24.199694759563727 19 25.7070502659889 25.15462777897633 24.989822232286077 24.148499722748692 20 25.671965532610308 23.81868964492646 25.109196256128364 25.400148566334867 21 26.990791752395964 24.125442315624067 23.898237393781848 24.98552853819812 22 25.881092751173107 24.222040723158845 24.57400228023059 25.322864245437458 23 24.1557577036348 23.95872771525452 25.27303363774417 26.612480943366506 24 24.593503907759057 25.301358057710022 24.811209176547504 25.293928857983417 25 25.04686205498877 24.19425198413406 24.88455352972011 25.874332431157054 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 271.0 1 271.0 2 641.0 3 1011.0 4 1011.0 5 1011.0 6 2489.5 7 3968.0 8 3968.0 9 3968.0 10 4072.0 11 4176.0 12 4176.0 13 4176.0 14 4540.5 15 4905.0 16 4905.0 17 4905.0 18 7821.0 19 10737.0 20 10737.0 21 10737.0 22 17399.5 23 24062.0 24 24062.0 25 24062.0 26 35881.5 27 47701.0 28 47701.0 29 47701.0 30 58141.5 31 68582.0 32 68582.0 33 68582.0 34 85178.0 35 101774.0 36 101774.0 37 101774.0 38 115027.0 39 128280.0 40 128280.0 41 128280.0 42 147808.5 43 167337.0 44 167337.0 45 167337.0 46 197911.5 47 228486.0 48 228486.0 49 228486.0 50 225667.0 51 222848.0 52 222848.0 53 222848.0 54 204969.0 55 187090.0 56 187090.0 57 187090.0 58 174348.5 59 161607.0 60 161607.0 61 161607.0 62 145728.0 63 129849.0 64 129849.0 65 129849.0 66 108847.5 67 87846.0 68 87846.0 69 87846.0 70 66883.0 71 45920.0 72 45920.0 73 45920.0 74 36518.0 75 27116.0 76 27116.0 77 27116.0 78 22569.0 79 18022.0 80 18022.0 81 18022.0 82 12790.0 83 7558.0 84 7558.0 85 7558.0 86 5571.5 87 3585.0 88 3585.0 89 3585.0 90 2417.0 91 1249.0 92 1249.0 93 1249.0 94 743.5 95 238.0 96 238.0 97 238.0 98 459.5 99 681.0 100 681.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007893648224611683 2 0.0032049398806694054 3 0.004035850220102214 4 0.015549893495099706 5 0.037094211581821815 6 0.049023710026535716 7 0.07217049805359253 8 0.09395221909443831 9 0.0995311885163443 10 0.12327148392871026 11 0.12481460313051404 12 0.13763436265319168 13 0.12564551346994687 14 0.12873175187355443 15 0.11882017853889165 16 0.11656485047471687 17 0.12843499818089987 18 0.13597254197432607 19 0.13710020600641346 20 0.12754473710293615 21 0.13514163163489326 22 0.15508347978128065 23 0.1432726828136286 24 0.13941488480911912 25 0.1365660493596352 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1684899.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.12944861569773 #Duplication Level Percentage of deduplicated Percentage of total 1 79.52512616537743 37.47975347268034 2 11.998512611056299 11.309665671351581 3 3.4869217860381023 4.930101034261192 4 1.4879765149740303 2.8051005081533424 5 0.8198860261034616 1.9320388168985854 6 0.5140743990438724 1.4536825784630327 7 0.3420467927122391 1.128433371890698 8 0.25038068981320155 0.9440243083931387 9 0.19241004819370733 0.816136153154033 >10 1.1347919402521771 9.808529214824738 >50 0.10773940123767764 3.584797659354661 >100 0.11465493606345456 11.848160042100517 >500 0.017784629544289013 5.867317935172292 >1k 0.007694059590082481 6.092259233301916 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 4777 0.2835184779621805 No Hit TCCATGTACTCTGCGTTGATACCAC 4215 0.2501633629078064 No Hit GTATCAACGCAGAGTACTTTTTTTT 3485 0.20683732378023847 No Hit TATCAACGCAGAGTACTTTTTTTTT 2578 0.15300620393269862 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2413 0.14321333207509768 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2405 0.14273852616685034 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2400 0.14244177247419576 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2386 0.14161086213476298 No Hit GAATAGGACCGCGGTTCTATTTTGT 2278 0.13520098237342415 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2247 0.13336110947896582 No Hit GAATAACGCCGCCGCATCGCCAGTC 2228 0.1322334454468784 No Hit GTATCTGATCGTCTTCGAACCTCCG 2155 0.12790084153412165 No Hit GAGTACATGGAAGCAGTGGTATCAA 2152 0.1277227893185289 No Hit GAACTACGACGGTATCTGATCGTCT 2117 0.12564551346994687 No Hit GTCCTATTCCATTATTCCTAGCTGC 1975 0.11721770859855696 No Hit CTATTGGAGCTGGAATTACCGCGGC 1959 0.1162680967820623 No Hit CATGTACTCTGCGTTGATACCACTG 1852 0.10991756775925442 No Hit ATCAGATACCGTCGTAGTTCCGACC 1820 0.10801834412626514 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1819 0.10795899338773421 No Hit CTCTTAATCATGGCCTCAGTTCCGA 1794 0.10647522492446135 No Hit GCTCTTAGCTGAGTGTCCCGCGGGG 1735 0.10297353135113738 No Hit GCTTTGAACACTCTAATTTTTTCAA 1715 0.10178651658051907 No Hit TCGTAGTTCCGACCATAAACGATGC 1713 0.10166781510345725 No Hit CTTTAATATACGCTATTGGAGCTGG 1706 0.10125235993374085 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.935073853091491E-5 2 0.0 0.0 0.0 0.0 5.935073853091491E-5 3 0.0 0.0 0.0 0.0 5.935073853091491E-5 4 0.0 0.0 0.0 0.0 5.935073853091491E-5 5 0.0 0.0 0.0 0.0 5.935073853091491E-5 6 0.0 0.0 0.0 0.0 5.935073853091491E-5 7 0.0 0.0 0.0 0.0 5.935073853091491E-5 8 0.0 0.0 0.0 0.0 5.935073853091491E-5 9 0.0 0.0 0.0 0.0 5.935073853091491E-5 10 0.0 0.0 0.0 0.0 5.935073853091491E-5 11 0.0 0.0 0.0 0.0 5.935073853091491E-5 12 0.0 0.0 0.0 0.0 3.5610443118548943E-4 13 0.0 0.0 0.0 0.0 4.1545516971640435E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAGGT 30 7.7523047E-4 18.989338 2 GGGCTAA 35 0.002179319 16.275608 1 CGAACGA 175 0.0 15.746182 16 TAACGAA 195 0.0 14.12951 13 ATAACGA 205 0.0 13.904135 12 ACGAACG 200 0.0 13.77668 15 CGATAAC 210 0.0 13.119869 10 ATGCGCC 60 4.0891528E-4 12.667836 11 CCGATAA 210 0.0 12.6674595 9 CGCGCCA 60 4.0901784E-4 12.6674595 10 TCCATTA 385 0.0 12.584829 8 AACGAAC 220 0.0 12.523883 14 AATTCCG 220 0.0 12.522022 5 CGCATCG 380 0.0 12.251131 13 GAACCGT 55 0.003067872 12.091307 6 TTAGACC 55 0.0030706048 12.089869 4 TTAGTAC 55 0.0030760763 12.086995 3 TTCGGGA 55 0.0030815562 12.084124 2 GCATCGC 380 0.0 12.001108 14 AGGCCCG 475 0.0 12.000751 10 >>END_MODULE