##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062457_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1025503 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.070528316348174 32.0 32.0 32.0 32.0 32.0 2 30.734829639698763 32.0 32.0 32.0 32.0 32.0 3 30.725355264684744 32.0 32.0 32.0 32.0 32.0 4 30.777929464857735 32.0 32.0 32.0 32.0 32.0 5 30.577103138654884 32.0 32.0 32.0 32.0 32.0 6 34.21984528567932 36.0 36.0 36.0 32.0 36.0 7 34.049174892711186 36.0 36.0 36.0 32.0 36.0 8 34.04574340591885 36.0 36.0 36.0 32.0 36.0 9 34.20913249400538 36.0 36.0 36.0 32.0 36.0 10 33.880663440282476 36.0 36.0 36.0 32.0 36.0 11 34.24606948980159 36.0 36.0 36.0 32.0 36.0 12 33.988615342909775 36.0 36.0 36.0 32.0 36.0 13 34.10786804134166 36.0 36.0 36.0 32.0 36.0 14 34.01538171999497 36.0 36.0 36.0 32.0 36.0 15 33.95608399000295 36.0 36.0 36.0 32.0 36.0 16 33.93959744632634 36.0 36.0 36.0 32.0 36.0 17 33.8538804859664 36.0 36.0 36.0 32.0 36.0 18 33.87881361634242 36.0 36.0 36.0 32.0 36.0 19 33.85954892379642 36.0 36.0 36.0 32.0 36.0 20 33.85468204383605 36.0 36.0 36.0 32.0 36.0 21 33.79044234877909 36.0 36.0 36.0 32.0 36.0 22 33.740970041043276 36.0 36.0 36.0 32.0 36.0 23 33.66712530338771 36.0 36.0 36.0 27.0 36.0 24 33.646068319644115 36.0 36.0 36.0 27.0 36.0 25 33.11007963896741 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 47.0 5 111.0 6 170.0 7 38.0 8 157.0 9 169.0 10 104.0 11 38.0 12 64.0 13 58.0 14 215.0 15 270.0 16 410.0 17 547.0 18 763.0 19 1053.0 20 1768.0 21 2407.0 22 3680.0 23 5264.0 24 7183.0 25 10042.0 26 13480.0 27 17349.0 28 23219.0 29 30811.0 30 39850.0 31 53811.0 32 77942.0 33 109295.0 34 231761.0 35 393420.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.743480720095185 16.79594702658423 11.215794503715552 25.244777749605042 2 15.801924970988912 20.4956751538319 37.21347284659717 26.488927028582015 3 19.112895911937112 25.14176716735791 28.146012137122373 27.599324783582606 4 12.308685598254629 15.644453893875307 35.52213361213489 36.52472689573518 5 13.849446505983668 37.37742946219189 33.97530445097374 14.797819580850707 6 34.024766321860724 34.700264677504165 17.615053740362395 13.659915260272717 7 29.43006354311408 30.84143885341369 21.614221479758317 18.114276123713914 8 28.787745700845193 32.32271476254611 20.240967383029805 18.648572153578886 9 27.307731348994103 14.689485006188047 18.401141567664432 39.60164207715342 10 15.29296913134311 27.544955776402368 32.47124978034637 24.690825311908153 11 37.04535691971259 21.462335988753516 21.502753045923146 19.989554045610745 12 23.488209518304732 24.34222859240629 29.491142493380302 22.678419395908676 13 30.324183001431226 19.83778158309398 25.121497845353595 24.716537570121194 14 23.78510256920932 19.62180410901664 25.41101881899942 31.182074502774622 15 25.565739622615723 26.47801032247232 24.09429433005944 23.861955724852518 16 25.799171226224004 25.6176024131081 24.757395756561127 23.825830604106773 17 23.814009975466483 25.72817097898787 26.612666245571422 23.845152799974226 18 25.16690782626355 24.164289243110353 27.6789706878809 22.989832242745198 19 24.38569307061198 27.23337072826383 25.61679667019136 22.764139530932834 20 24.372232879855122 24.015600822020787 27.668907210254755 23.943259087869336 21 25.71386449974567 25.36297326138468 24.205344598823135 24.717817640046512 22 24.302164793012665 25.563951626133765 25.267181237939734 24.86670234291384 23 23.121824139856972 25.15173825249089 25.490268832533307 26.236168775118834 24 23.248504660304516 26.910060907143457 25.30477981452515 24.536654618026873 25 24.929629307794524 24.965461488216874 24.849958846691965 25.254950357296636 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 169.0 1 169.0 2 501.0 3 833.0 4 833.0 5 833.0 6 2290.0 7 3747.0 8 3747.0 9 3747.0 10 3703.0 11 3659.0 12 3659.0 13 3659.0 14 3523.0 15 3387.0 16 3387.0 17 3387.0 18 5455.5 19 7524.0 20 7524.0 21 7524.0 22 11888.0 23 16252.0 24 16252.0 25 16252.0 26 23651.5 27 31051.0 28 31051.0 29 31051.0 30 37974.5 31 44898.0 32 44898.0 33 44898.0 34 54075.5 35 63253.0 36 63253.0 37 63253.0 38 71668.5 39 80084.0 40 80084.0 41 80084.0 42 94896.0 43 109708.0 44 109708.0 45 109708.0 46 139721.0 47 169734.0 48 169734.0 49 169734.0 50 154105.0 51 138476.0 52 138476.0 53 138476.0 54 122860.0 55 107244.0 56 107244.0 57 107244.0 58 97163.5 59 87083.0 60 87083.0 61 87083.0 62 77084.0 63 67085.0 64 67085.0 65 67085.0 66 55401.0 67 43717.0 68 43717.0 69 43717.0 70 32772.0 71 21827.0 72 21827.0 73 21827.0 74 17053.5 75 12280.0 76 12280.0 77 12280.0 78 10064.5 79 7849.0 80 7849.0 81 7849.0 82 5458.0 83 3067.0 84 3067.0 85 3067.0 86 2257.5 87 1448.0 88 1448.0 89 1448.0 90 990.5 91 533.0 92 533.0 93 533.0 94 317.0 95 101.0 96 101.0 97 101.0 98 297.5 99 494.0 100 494.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008093589194765886 2 0.003217933053340653 3 0.005265708632739251 4 0.015797125898217752 5 0.03695747355200326 6 0.04700132520333924 7 0.0669915153831827 8 0.0861040874575696 9 0.0923449273185939 10 0.1134077618495509 11 0.11535802430612101 12 0.12549938908028546 13 0.11750331300834808 14 0.11886849672794715 15 0.11077490753318127 16 0.10706940886569809 17 0.11604061616592053 18 0.12530436283462845 19 0.12676705967705604 20 0.11682072114854856 21 0.12228145602694483 22 0.14422190866335838 23 0.13369049139787986 24 0.12881483525645465 25 0.12520684971179996 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1025503.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.092270782797634 #Duplication Level Percentage of deduplicated Percentage of total 1 79.0689359291144 41.97949356856219 2 13.060554133919785 13.868289533029127 3 3.8024251699469187 6.056381602624414 4 1.4458391824462602 3.070515415312624 5 0.710868333044883 1.8870807014467454 6 0.4242910331141415 1.3515944652485379 7 0.2660049706873262 0.9885965553311169 8 0.17908920891501887 0.7606602219194559 9 0.13014787631867125 0.6218861662185257 >10 0.7254274540790058 7.250674943677611 >50 0.08365287495430143 3.130437987725666 >100 0.08897619948647557 9.483912100399944 >500 0.009375591101544765 3.374304624414305 >1k 0.004044372632038918 4.283567087709563 >5k 1.8383511963813266E-4 0.8392816575650414 >10k+ 1.8383511963813266E-4 1.0533233688152026 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 10792 1.052361621565222 No Hit TCCATGTACTCTGCGTTGATACCAC 8599 0.8385153432023115 No Hit GAGTACATGGAAGCAGTGGTATCAA 4234 0.41287056205588873 No Hit CATGTACTCTGCGTTGATACCACTG 3593 0.35036465032281716 No Hit GTATCAACGCAGAGTACTTTTTTTT 3161 0.30823898126090316 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2654 0.2587998279868513 No Hit GCTTCCATGTACTCTGCGTTGATAC 2633 0.25675205240745275 No Hit TATCAACGCAGAGTACTTTTTTTTT 2491 0.24290518896580507 No Hit CCCATGTACTCTGCGTTGATACCAC 2479 0.241735031491863 No Hit GTACATGGGAAGCAGTGGTATCAAC 2410 0.23500662601669617 No Hit GCGTTGATACCACTGCTTCCATGTA 2295 0.22379261689141816 No Hit CATGGAAGCAGTGGTATCAACGCAG 2215 0.21599156706513778 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1832 0.17864404102182052 No Hit GTATCAACGCAGAGTACATGGAAGC 1635 0.1594339558246051 No Hit ACTCTGCGTTGATACCACTGCTTCC 1427 0.13915122627627613 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1404 0.13690842445122053 No Hit CAGTGGTATCAACGCAGAGTACATG 1371 0.13369049139787986 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1369 0.13349546515222288 No Hit GTACATGGGGTGGTATCAACGCAAA 1223 0.11925854921926118 No Hit TATCAACGCAGAGTACATGGAAGCA 1175 0.11457791932349295 No Hit GGTATCAACGCAGAGTACTTTTTTT 1120 0.1092146975679252 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1110 0.10823956633964014 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1040 0.10141364774164482 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.751312282850465E-5 9.751312282850465E-5 2 0.0 0.0 0.0 9.751312282850465E-5 9.751312282850465E-5 3 0.0 0.0 0.0 9.751312282850465E-5 9.751312282850465E-5 4 0.0 0.0 0.0 2.9253936848551394E-4 9.751312282850465E-5 5 0.0 0.0 0.0 2.9253936848551394E-4 9.751312282850465E-5 6 0.0 0.0 0.0 2.9253936848551394E-4 9.751312282850465E-5 7 0.0 0.0 0.0 3.900524913140186E-4 9.751312282850465E-5 8 0.0 0.0 0.0 5.850787369710279E-4 9.751312282850465E-5 9 0.0 0.0 0.0 6.825918597995325E-4 9.751312282850465E-5 10 0.0 0.0 0.0 6.825918597995325E-4 9.751312282850465E-5 11 0.0 0.0 0.0 6.825918597995325E-4 9.751312282850465E-5 12 0.0 0.0 0.0 6.825918597995325E-4 9.751312282850465E-5 13 0.0 0.0 0.0 7.801049826280372E-4 9.751312282850465E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAT 80 2.0066855E-6 13.057167 1 CGTCGCC 60 4.0905332E-4 12.666438 14 TATGACT 60 4.093903E-4 12.665202 4 CCGTCGT 130 1.9645086E-10 12.424067 9 CGACCCG 115 5.318725E-9 12.390477 5 AGGCCCG 240 0.0 12.271811 10 CGCCAGT 155 1.8189894E-12 12.260238 18 AACCGCG 70 1.0893899E-4 12.21526 7 CTAACCT 55 0.003069875 12.089512 4 CTTAGGT 55 0.0030721202 12.088332 3 TACGCTA 185 0.0 11.811751 9 TTAAGCT 65 8.013966E-4 11.693239 11 AAGCTCG 65 8.013966E-4 11.693239 7 TGACCGT 65 8.023818E-4 11.691527 5 TTCTAAT 65 8.040261E-4 11.688675 2 GTGCTAG 65 8.046846E-4 11.687534 1 GTTATTC 90 7.471219E-6 11.608636 3 CGTTATT 90 7.4793406E-6 11.607503 2 ACGCTAT 190 0.0 11.500916 10 AAGACGG 215 0.0 11.487605 5 >>END_MODULE