##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062453_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1850832 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.298890985243393 32.0 32.0 32.0 32.0 32.0 2 31.417312862539656 32.0 32.0 32.0 32.0 32.0 3 31.50226546763834 32.0 32.0 32.0 32.0 32.0 4 31.60002636652057 32.0 32.0 32.0 32.0 32.0 5 31.536278279173906 32.0 32.0 32.0 32.0 32.0 6 35.130160922223084 36.0 36.0 36.0 36.0 36.0 7 35.149191282623164 36.0 36.0 36.0 36.0 36.0 8 35.0891188395273 36.0 36.0 36.0 36.0 36.0 9 35.225414840460935 36.0 36.0 36.0 36.0 36.0 10 35.09820286228032 36.0 36.0 36.0 36.0 36.0 11 35.23117441237238 36.0 36.0 36.0 36.0 36.0 12 35.13583998979918 36.0 36.0 36.0 36.0 36.0 13 35.183379690863354 36.0 36.0 36.0 36.0 36.0 14 35.13914931230927 36.0 36.0 36.0 36.0 36.0 15 35.102366395221175 36.0 36.0 36.0 36.0 36.0 16 35.10811408058646 36.0 36.0 36.0 36.0 36.0 17 35.084452829862464 36.0 36.0 36.0 36.0 36.0 18 35.098722628525984 36.0 36.0 36.0 36.0 36.0 19 35.08059780682417 36.0 36.0 36.0 36.0 36.0 20 35.073880827649404 36.0 36.0 36.0 36.0 36.0 21 35.06225524520864 36.0 36.0 36.0 36.0 36.0 22 35.04342371430794 36.0 36.0 36.0 36.0 36.0 23 34.99825754039264 36.0 36.0 36.0 36.0 36.0 24 34.9726436543133 36.0 36.0 36.0 36.0 36.0 25 34.94812116929035 36.0 36.0 36.0 32.0 36.0 26 34.89889141748144 36.0 36.0 36.0 32.0 36.0 27 34.88269005506713 36.0 36.0 36.0 32.0 36.0 28 34.8658370938043 36.0 36.0 36.0 32.0 36.0 29 34.837677325656784 36.0 36.0 36.0 32.0 36.0 30 34.82153377508061 36.0 36.0 36.0 32.0 36.0 31 34.820961599972335 36.0 36.0 36.0 32.0 36.0 32 34.78527656751126 36.0 36.0 36.0 32.0 36.0 33 34.76175093147298 36.0 36.0 36.0 32.0 36.0 34 34.74848878774519 36.0 36.0 36.0 32.0 36.0 35 34.7086202313338 36.0 36.0 36.0 32.0 36.0 36 34.68894961833381 36.0 36.0 36.0 32.0 36.0 37 34.664301243981086 36.0 36.0 36.0 32.0 36.0 38 34.62669869550559 36.0 36.0 36.0 32.0 36.0 39 34.59465797003726 36.0 36.0 36.0 32.0 36.0 40 34.567892709873185 36.0 36.0 36.0 32.0 36.0 41 34.54450376911573 36.0 36.0 36.0 32.0 36.0 42 34.487552084684076 36.0 36.0 36.0 32.0 36.0 43 34.500540837850224 36.0 36.0 36.0 32.0 36.0 44 34.468694079203296 36.0 36.0 36.0 32.0 36.0 45 34.40107043751134 36.0 36.0 36.0 32.0 36.0 46 34.4327615904631 36.0 36.0 36.0 32.0 36.0 47 34.389081775115194 36.0 36.0 36.0 32.0 36.0 48 34.365838714696956 36.0 36.0 36.0 32.0 36.0 49 34.37323430759788 36.0 36.0 36.0 32.0 36.0 50 33.83875143719149 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 40.0 22 151.0 23 428.0 24 1178.0 25 2946.0 26 6066.0 27 11521.0 28 19321.0 29 29463.0 30 42074.0 31 60557.0 32 90275.0 33 143611.0 34 318846.0 35 1124345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.507291134725904 17.52720159305282 11.567411586379075 26.398095685842204 2 16.320040113619232 20.05399993408053 36.25127854056452 27.37468141173572 3 18.451005118795607 23.68564089763165 28.54460657025566 29.31874741331708 4 12.371395258117186 15.511722874003283 35.54250912835674 36.574372739522786 5 14.618182525480433 36.35824321170155 33.40967737752535 15.61389688529267 6 35.25176124541487 34.86636471057979 16.34474646656808 13.537127577437255 7 30.605603645065376 30.264189437069078 20.61949470264978 18.51071221521576 8 28.673320971325328 32.57491765865297 19.245560915307276 19.50620045471442 9 27.30269413971663 14.10214433292703 18.345641311583115 40.24952021577323 10 15.763775426402828 26.557353665810833 31.607352801334756 26.071518106451585 11 37.93488550014264 20.864562531877556 21.676197515495733 19.524354452484072 12 24.488770455665342 23.525744097789534 28.553266855122455 23.432218591422668 13 29.764830087225636 19.00912670625967 25.15285017764983 26.073193028864853 14 23.63661315559705 19.360968472557207 24.699000233408544 32.3034181384372 15 25.61021205598347 26.66503496805761 22.303158795611917 25.421594180347 16 26.420064057677845 25.369401436759254 23.452317660381926 24.75821684518098 17 24.496064472626365 25.64614184323591 25.10006310675415 24.757730577383576 18 25.59951416444064 24.24941863983333 26.055039031095205 24.096028164630827 19 25.621288155813172 25.341468053286302 24.97298512236659 24.064258668533935 20 25.580009422789317 23.91497445473171 25.299865141730855 25.20515098074812 21 26.813995003328234 24.295776169852264 23.975001512833146 24.915227313986357 22 25.63506574340621 24.364069780509524 24.6954882993162 25.305376176768068 23 24.355641138687897 23.96803167440373 25.18321490010979 26.49311228679859 24 24.72131452233374 25.17332745489596 24.80895078537652 25.296407237393776 25 25.301540064144124 24.237370004408827 24.725312724223482 25.735777207223563 26 24.739738668879728 24.870598736135964 25.311265420092155 25.07839717489216 27 25.797046949696135 24.676145646930678 24.479423308004183 25.047384095369 28 24.855308315395455 24.121854387648366 25.3996040699534 25.62323322700277 29 24.688734579907848 24.845636989202692 25.462818883615583 25.002809547273873 30 25.04192709008705 24.670472522627662 25.569041382470154 24.718559004815134 31 25.115785765536796 24.611580089386827 24.440197705680472 25.832436439395906 32 24.803493780094573 24.727527944189422 24.59250758577764 25.876470689938362 33 24.581161337171604 24.240935968256437 25.093849684898466 26.084053009673486 34 25.107411153470437 24.460837072192398 25.571256602436094 24.86049517190107 35 26.1364618722823 24.203979615653935 25.10497981448343 24.554578697580332 36 24.865357849875082 24.96158484400529 24.778369943895502 25.394687362224122 37 25.908456305056323 24.637406312404366 24.720720195025805 24.733417187513506 38 24.80046811379963 24.368122012154533 25.102386386230624 25.729023487815212 39 25.266204604199626 24.439171140330405 24.68035996784149 25.614264287628487 40 25.66364748394236 24.529670980402326 25.050733940195546 24.75594759545977 41 24.45176007330757 24.87362440243091 25.53024801818858 25.144367506072946 42 26.11376937507024 24.947320988614848 24.78312456235898 24.15578507395593 43 25.102656535006957 23.886176595174494 25.012264754445567 25.998902115372978 44 24.841368638536615 24.526699343862653 25.103791159867562 25.528140857733174 45 24.966987819531973 24.763079523154993 25.01950474165132 25.25042791566171 46 24.627086629148405 24.433930254069523 25.438721612766585 25.50026150401549 47 24.926951770879256 24.164213715777553 25.723674542043796 25.18515997129939 48 25.553318723687507 25.401278992366677 24.365528583901728 24.679873700044087 49 24.406645227659777 24.891562281179493 25.271499520215773 25.430292970944958 50 24.371363797470543 25.56774466834375 24.570247326607706 25.490644207577994 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 18.0 2 29.0 3 81.0 4 133.0 5 176.5 6 220.0 7 202.5 8 185.0 9 279.0 10 373.0 11 543.5 12 714.0 13 1293.0 14 1872.0 15 2529.0 16 3186.0 17 3897.5 18 4609.0 19 4976.5 20 5344.0 21 6324.0 22 7304.0 23 7935.0 24 8566.0 25 9975.0 26 11384.0 27 14081.5 28 16779.0 29 19234.5 30 21690.0 31 23667.5 32 25645.0 33 29758.5 34 33872.0 35 39209.5 36 44547.0 37 54208.0 38 63869.0 39 69905.5 40 75942.0 41 84317.0 42 92692.0 43 96195.0 44 99698.0 45 112575.0 46 125452.0 47 135520.5 48 145589.0 49 147749.5 50 149910.0 51 141623.5 52 133337.0 53 131170.0 54 129003.0 55 130712.5 56 132422.0 57 128576.0 58 124730.0 59 114659.0 60 104588.0 61 92278.0 62 79968.0 63 69691.5 64 59415.0 65 50932.0 66 42449.0 67 37083.0 68 31717.0 69 29349.5 70 26982.0 71 21105.5 72 15229.0 73 13921.5 74 12614.0 75 9193.5 76 5773.0 77 5278.0 78 4783.0 79 4071.5 80 3360.0 81 2670.5 82 1981.0 83 1699.5 84 1418.0 85 1154.5 86 891.0 87 648.0 88 405.0 89 254.0 90 103.0 91 63.5 92 24.0 93 18.5 94 13.0 95 9.0 96 5.0 97 6.5 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0160468373142457 2 0.004808648218747029 3 3.241785316009233E-4 4 3.241785316009233E-4 5 0.0 6 5.94327307935026E-4 7 5.402975526682054E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1850832.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.951639102562346 #Duplication Level Percentage of deduplicated Percentage of total 1 80.28546362732585 44.921032860580326 2 12.197343243477638 13.649226943382759 3 3.353605818082212 5.629192272767678 4 1.3630806806878213 3.0506639325408 5 0.7357082881320431 2.0582042311164015 6 0.4643429756546507 1.5588450356183343 7 0.2998561154174143 1.174420880677201 8 0.20930017037634704 0.9368550077601743 9 0.15927783728712297 0.8020670462033176 >10 0.777816036849108 7.847429791957912 >50 0.06805925852077872 2.703818296289656 >100 0.0718701079557652 8.661463334685978 >500 0.01077971609447932 4.1022403299202015 >1k 0.0034961241387500494 2.904540036499344 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2544 0.13745169739879148 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2188 0.11821710452380335 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2179 0.11773083672640197 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2033 0.10984249245744616 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2028 0.10957234368111206 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1962 0.10600637983350192 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1856 0.10027922577521893 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.402975526682054E-5 2 0.0 0.0 0.0 0.0 5.402975526682054E-5 3 0.0 0.0 0.0 0.0 5.402975526682054E-5 4 0.0 0.0 0.0 0.0 5.402975526682054E-5 5 0.0 0.0 0.0 5.402975526682054E-5 5.402975526682054E-5 6 0.0 0.0 0.0 5.402975526682054E-5 5.402975526682054E-5 7 0.0 0.0 0.0 5.402975526682054E-5 5.402975526682054E-5 8 0.0 0.0 0.0 5.402975526682054E-5 5.402975526682054E-5 9 0.0 0.0 0.0 1.0805951053364108E-4 5.402975526682054E-5 10 0.0 0.0 0.0 1.0805951053364108E-4 5.402975526682054E-5 11 0.0 0.0 0.0 2.1611902106728216E-4 5.402975526682054E-5 12 0.0 0.0 0.0 2.701487763341027E-4 2.701487763341027E-4 13 0.0 0.0 0.0 2.701487763341027E-4 3.782082868677438E-4 14 0.0 0.0 0.0 2.701487763341027E-4 3.782082868677438E-4 15 0.0 0.0 0.0 3.782082868677438E-4 5.402975526682054E-4 16 0.0 0.0 0.0 4.3223804213456433E-4 5.94327307935026E-4 17 0.0 0.0 0.0 4.3223804213456433E-4 5.94327307935026E-4 18 0.0 0.0 0.0 4.862677974013849E-4 6.483570632018465E-4 19 0.0 0.0 0.0 5.94327307935026E-4 6.483570632018465E-4 20 0.0 0.0 0.0 8.644760842691287E-4 7.564165737354876E-4 21 0.0 0.0 0.0 0.0010265653500695904 7.564165737354876E-4 22 0.0 0.0 0.0 0.001296714126403693 7.564165737354876E-4 23 0.0 0.0 0.0 0.001891041434338719 8.104463290023082E-4 24 0.0 0.0 0.0 0.003079696050208771 8.104463290023082E-4 25 0.0 0.0 0.0 0.0039982018897447204 8.104463290023082E-4 26 0.0 0.0 0.0 0.0052408862608815925 8.104463290023082E-4 27 0.0 0.0 0.0 0.006753719408352568 8.104463290023082E-4 28 0.0 0.0 0.0 0.010751921298097288 8.104463290023082E-4 29 0.0 0.0 0.0 0.019936979693456782 8.104463290023082E-4 30 0.0 0.0 0.0 0.03479516239183243 8.104463290023082E-4 31 0.0 0.0 0.0 0.06905002723099665 8.644760842691287E-4 32 0.0 0.0 0.0 0.10989652221271298 8.644760842691287E-4 33 0.0 0.0 0.0 0.15268808838403486 8.644760842691287E-4 34 0.0 0.0 0.0 0.20412441539804801 8.644760842691287E-4 35 0.0 0.0 0.0 0.26101774769401004 8.644760842691287E-4 36 0.0 0.0 0.0 0.3444937195812478 8.644760842691287E-4 37 0.0 0.0 0.0 0.47070722788454056 8.644760842691287E-4 38 0.0 0.0 0.0 0.63555201120361 9.185058395359492E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCG 480 0.0 20.624912 8 ATACCGT 510 0.0 20.274424 6 TACCGTC 495 0.0 19.555471 7 TAATACC 260 0.0 18.615305 4 CGTCGTA 540 0.0 18.333254 10 CCGTCGT 580 0.0 17.068892 9 GTATTAG 595 0.0 17.011087 1 CGCAATA 630 0.0 16.761833 36 TTAATAC 250 0.0 16.719929 3 TACGAAT 645 0.0 16.713108 41 ATACGAA 645 0.0 16.713108 40 CAATACG 645 0.0 16.713108 38 CGTCTTA 290 0.0 16.689583 15 GATATAC 175 3.621608E-9 16.345436 1 GTCGTAG 610 0.0 16.229439 11 CGAGCCG 775 0.0 16.180576 15 AGATACC 700 0.0 16.028503 4 CTAGGAC 320 0.0 15.812432 3 GACGGTA 645 0.0 15.689856 8 CTAGCGG 730 0.0 15.671165 29 >>END_MODULE