##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062452_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1877213 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.163846617299157 32.0 32.0 32.0 32.0 32.0 2 30.86968553914766 32.0 32.0 32.0 32.0 32.0 3 30.871926627399233 32.0 32.0 32.0 32.0 32.0 4 30.91761190658705 32.0 32.0 32.0 32.0 32.0 5 30.77440386359992 32.0 32.0 32.0 32.0 32.0 6 34.392682663075526 36.0 36.0 36.0 32.0 36.0 7 34.271459338924245 36.0 36.0 36.0 32.0 36.0 8 34.275471137265725 36.0 36.0 36.0 32.0 36.0 9 34.3938673981056 36.0 36.0 36.0 32.0 36.0 10 34.12946160078798 36.0 36.0 36.0 32.0 36.0 11 34.39910974407273 36.0 36.0 36.0 32.0 36.0 12 34.2040732724523 36.0 36.0 36.0 32.0 36.0 13 34.3202183236532 36.0 36.0 36.0 32.0 36.0 14 34.22958715926216 36.0 36.0 36.0 32.0 36.0 15 34.1872675077362 36.0 36.0 36.0 32.0 36.0 16 34.18597782989996 36.0 36.0 36.0 32.0 36.0 17 34.106834972909304 36.0 36.0 36.0 32.0 36.0 18 34.12674747085173 36.0 36.0 36.0 32.0 36.0 19 34.11015798420318 36.0 36.0 36.0 32.0 36.0 20 34.09321158547272 36.0 36.0 36.0 32.0 36.0 21 34.064071578451674 36.0 36.0 36.0 32.0 36.0 22 34.01730703974456 36.0 36.0 36.0 32.0 36.0 23 34.01438089337758 36.0 36.0 36.0 32.0 36.0 24 33.98055361858244 36.0 36.0 36.0 32.0 36.0 25 33.535801211689886 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 11.0 4 59.0 5 179.0 6 323.0 7 73.0 8 297.0 9 323.0 10 198.0 11 66.0 12 145.0 13 130.0 14 369.0 15 463.0 16 825.0 17 1062.0 18 1425.0 19 2038.0 20 2940.0 21 3966.0 22 5889.0 23 8283.0 24 11330.0 25 15490.0 26 21217.0 27 27090.0 28 36414.0 29 48335.0 30 62186.0 31 85138.0 32 122527.0 33 180445.0 34 418135.0 35 819841.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.12029578485275 17.8484741934109 11.107168733751012 25.92406128798534 2 17.199749404943283 20.393078377013442 36.158298936888826 26.248873281154445 3 18.641776160176608 24.43488137196824 28.49960151891613 28.42374094893902 4 12.680618726860743 15.461938004774764 35.98570234385448 35.871740924510014 5 14.935792292943601 36.31622868580162 33.090922461560105 15.657056559694677 6 33.67614008515364 35.52763762855253 17.070539812713147 13.72568247358068 7 30.008283794041642 30.628608834341176 21.051391506818938 18.31171586479825 8 28.501973220502723 31.639772362543678 19.920623326548 19.937631090405596 9 27.796197159066672 14.049503049950946 18.992663055069745 39.161636735912644 10 16.376674936906532 26.213335921783298 30.97297274234185 26.437016398968318 11 37.284125630469696 21.36916923867901 22.189066507519236 19.15763862333206 12 24.810628790824623 23.994523023517182 28.247660896852235 22.947187288805964 13 29.113526411593444 19.468573449152558 25.539162587980424 25.878737551273577 14 23.805457565248744 19.847810712239895 24.960877955221125 31.38585376729024 15 25.539125783483605 26.701558674409466 22.428869847726997 25.330445694379932 16 25.932704783876794 25.71186452428683 23.482929810555213 24.872500881281162 17 23.974569920717677 25.514988439660897 25.122656931269983 25.387784708351447 18 24.956421925372148 24.510720099680178 26.22247967245503 24.310378302492644 19 25.61676256394856 25.010974802493564 25.40350734951719 23.96875528404069 20 25.685739383566574 24.112628250291877 24.93467815356914 25.266954212572408 21 27.138602945294586 23.92959840237851 24.34089845939832 24.590900192928583 22 25.853959643317864 24.267733540476723 24.70894468908752 25.169362127117896 23 24.50941900572598 24.030547088627312 25.454200171341938 26.00583373430477 24 24.6977524463849 25.120058889265245 25.11099079588522 25.07119786846464 25 24.78161076496107 24.469568992969194 25.278317257403526 25.470502984666215 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 297.0 1 297.0 2 782.5 3 1268.0 4 1268.0 5 1268.0 6 3398.0 7 5528.0 8 5528.0 9 5528.0 10 5691.0 11 5854.0 12 5854.0 13 5854.0 14 5995.5 15 6137.0 16 6137.0 17 6137.0 18 10038.5 19 13940.0 20 13940.0 21 13940.0 22 21561.5 23 29183.0 24 29183.0 25 29183.0 26 43379.5 27 57576.0 28 57576.0 29 57576.0 30 69017.5 31 80459.0 32 80459.0 33 80459.0 34 99787.5 35 119116.0 36 119116.0 37 119116.0 38 133434.0 39 147752.0 40 147752.0 41 147752.0 42 167768.5 43 187785.0 44 187785.0 45 187785.0 46 214498.0 47 241211.0 48 241211.0 49 241211.0 50 243529.0 51 245847.0 52 245847.0 53 245847.0 54 227273.5 55 208700.0 56 208700.0 57 208700.0 58 191127.0 59 173554.0 60 173554.0 61 173554.0 62 156729.0 63 139904.0 64 139904.0 65 139904.0 66 117360.5 67 94817.0 68 94817.0 69 94817.0 70 72581.5 71 50346.0 72 50346.0 73 50346.0 74 40655.0 75 30964.0 76 30964.0 77 30964.0 78 25859.5 79 20755.0 80 20755.0 81 20755.0 82 14846.5 83 8938.0 84 8938.0 85 8938.0 86 6736.5 87 4535.0 88 4535.0 89 4535.0 90 3076.0 91 1617.0 92 1617.0 93 1617.0 94 978.5 95 340.0 96 340.0 97 340.0 98 565.0 99 790.0 100 790.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009215789577421422 2 0.004314907258792689 3 0.004527989098733068 4 0.013956860516094871 5 0.03446598761035642 6 0.04474718638747974 7 0.06717405004120469 8 0.08517946551616679 9 0.0944485255535733 10 0.11810060978695545 11 0.11836696208688093 12 0.13083224972339313 13 0.11836696208688093 14 0.12310803302555437 15 0.11154834320878879 16 0.11197450688866953 17 0.12081740324619529 18 0.12875470178397444 19 0.1312584134032739 20 0.1207108623262251 21 0.12923413592384028 22 0.15059559037786335 23 0.1384499255012617 24 0.13360231364261807 25 0.1312584134032739 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1877213.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.60456022748298 #Duplication Level Percentage of deduplicated Percentage of total 1 76.38340257706452 35.59814885782882 2 13.85673815819532 12.915743761001504 3 4.270048651690188 5.970112186859335 4 1.7984953121028682 3.352723323669757 5 0.9050260116404785 2.10891696334687 6 0.5620714487117775 1.5717055610181985 7 0.3732914469090911 1.2177958603915302 8 0.26980046747067815 1.0059145708512227 9 0.20071425029531031 0.8418779429761695 >10 1.1299231169402593 9.749169926870756 >50 0.1139613884807326 3.746814406186596 >100 0.11209050508562683 11.359459677964107 >500 0.01789727607722704 5.637731496030907 >1k 0.00653938933590988 4.92388546500429 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4947 0.2635289655462646 No Hit TATCAACGCAGAGTACTTTTTTTTT 3373 0.1796812615297252 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3258 0.17355515863143928 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2369 0.12619771970468988 No Hit GAATAACGCCGCCGCATCGCCAGTC 2344 0.1248659582050625 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2327 0.12396036038531588 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2173 0.11575670954761126 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2152 0.11463802988792428 No Hit GAATAGGACCGCGGTTCTATTTTGT 2149 0.11447821850796899 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2144 0.11421186620804351 No Hit GTATCTGATCGTCTTCGAACCTCCG 2024 0.10781941100983213 No Hit GAACTACGACGGTATCTGATCGTCT 2016 0.10739324732995136 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2000 0.10654091997018984 No Hit CTATTGGAGCTGGAATTACCGCGGC 1971 0.10499607663062209 No Hit GTCCTATTCCATTATTCCTAGCTGC 1966 0.10472972433069662 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0654091997018985E-4 2 0.0 0.0 0.0 0.0 1.0654091997018985E-4 3 0.0 0.0 0.0 0.0 1.0654091997018985E-4 4 0.0 0.0 0.0 0.0 1.0654091997018985E-4 5 0.0 0.0 0.0 0.0 1.5981137995528478E-4 6 0.0 0.0 0.0 0.0 3.1962275991056957E-4 7 0.0 0.0 0.0 0.0 3.7289321989566446E-4 8 0.0 0.0 0.0 0.0 3.7289321989566446E-4 9 0.0 0.0 0.0 0.0 3.7289321989566446E-4 10 0.0 0.0 0.0 0.0 3.7289321989566446E-4 11 0.0 0.0 0.0 0.0 3.7289321989566446E-4 12 0.0 0.0 0.0 1.0654091997018985E-4 3.7289321989566446E-4 13 0.0 0.0 0.0 1.0654091997018985E-4 4.7943413986585435E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGCCA 355 0.0 15.525812 16 CGCATCG 385 0.0 13.819035 13 CCGTCGT 360 0.0 13.195611 9 CGCCAGT 420 0.0 12.897437 18 GAGTACG 60 4.1173602E-4 12.657659 1 GCATCGC 415 0.0 12.591475 14 CGTCGTA 370 0.0 12.582194 10 GTCGTAG 365 0.0 12.492923 11 CGGTCCA 420 0.0 12.441577 10 TCGCCAG 445 0.0 12.38609 17 AACGGAC 125 1.4078978E-9 12.162048 15 AGCAACT 295 0.0 11.91599 13 CGAACGA 185 0.0 11.814377 16 CATCGCC 455 0.0 11.694277 15 TATGACC 130 2.6375346E-9 11.686173 3 ACCGTCG 400 0.0 11.63884 8 TACCGTC 410 0.0 11.5866995 7 CGGACAT 205 0.0 11.584846 5 GCAACTT 305 0.0 11.525609 14 CCGCATC 465 0.0 11.441567 12 >>END_MODULE