##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062449_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1740528 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251944812148956 32.0 32.0 32.0 32.0 32.0 2 31.393562183429395 32.0 32.0 32.0 32.0 32.0 3 31.49423967899396 32.0 32.0 32.0 32.0 32.0 4 31.598231686017115 32.0 32.0 32.0 32.0 32.0 5 31.531754157359146 32.0 32.0 32.0 32.0 32.0 6 35.130148437715455 36.0 36.0 36.0 36.0 36.0 7 35.14154497945451 36.0 36.0 36.0 36.0 36.0 8 35.08722065947804 36.0 36.0 36.0 36.0 36.0 9 35.217020926983075 36.0 36.0 36.0 36.0 36.0 10 35.087109199047646 36.0 36.0 36.0 36.0 36.0 11 35.225536159142514 36.0 36.0 36.0 36.0 36.0 12 35.130411576257316 36.0 36.0 36.0 36.0 36.0 13 35.18065552521993 36.0 36.0 36.0 36.0 36.0 14 35.13924510263552 36.0 36.0 36.0 36.0 36.0 15 35.095386572350456 36.0 36.0 36.0 36.0 36.0 16 35.10298139415166 36.0 36.0 36.0 36.0 36.0 17 35.07655033415148 36.0 36.0 36.0 36.0 36.0 18 35.090113459823684 36.0 36.0 36.0 36.0 36.0 19 35.06842119173032 36.0 36.0 36.0 36.0 36.0 20 35.062387390493 36.0 36.0 36.0 36.0 36.0 21 35.04738447183843 36.0 36.0 36.0 36.0 36.0 22 35.03107103131923 36.0 36.0 36.0 36.0 36.0 23 34.98343261355175 36.0 36.0 36.0 36.0 36.0 24 34.95693720526185 36.0 36.0 36.0 32.0 36.0 25 34.91902342277746 36.0 36.0 36.0 32.0 36.0 26 34.882633315867366 36.0 36.0 36.0 32.0 36.0 27 34.855948309938135 36.0 36.0 36.0 32.0 36.0 28 34.83652604267211 36.0 36.0 36.0 32.0 36.0 29 34.80245821957475 36.0 36.0 36.0 32.0 36.0 30 34.7922463758124 36.0 36.0 36.0 32.0 36.0 31 34.784016114650264 36.0 36.0 36.0 32.0 36.0 32 34.75203788735372 36.0 36.0 36.0 32.0 36.0 33 34.72109382899902 36.0 36.0 36.0 32.0 36.0 34 34.701677307116 36.0 36.0 36.0 32.0 36.0 35 34.65958548210658 36.0 36.0 36.0 32.0 36.0 36 34.63061266466268 36.0 36.0 36.0 32.0 36.0 37 34.610116010773744 36.0 36.0 36.0 32.0 36.0 38 34.5539502955425 36.0 36.0 36.0 32.0 36.0 39 34.510686986937294 36.0 36.0 36.0 32.0 36.0 40 34.47361030675749 36.0 36.0 36.0 32.0 36.0 41 34.458289093884154 36.0 36.0 36.0 32.0 36.0 42 34.38358417675556 36.0 36.0 36.0 32.0 36.0 43 34.40095132051883 36.0 36.0 36.0 32.0 36.0 44 34.370446783964404 36.0 36.0 36.0 32.0 36.0 45 34.281805291267936 36.0 36.0 36.0 32.0 36.0 46 34.332809354402805 36.0 36.0 36.0 32.0 36.0 47 34.27567611667264 36.0 36.0 36.0 32.0 36.0 48 34.25660948861495 36.0 36.0 36.0 32.0 36.0 49 34.26635882904498 36.0 36.0 36.0 32.0 36.0 50 33.723468395797134 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 6.0 21 38.0 22 159.0 23 458.0 24 1217.0 25 2903.0 26 6232.0 27 11710.0 28 19593.0 29 29276.0 30 41375.0 31 58963.0 32 87363.0 33 137902.0 34 304331.0 35 1039000.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.87780715429645 17.501024283418214 11.314180047476183 26.306988514809156 2 16.385054968289957 20.15980851017376 36.03517005294009 27.419966468596197 3 18.524804440065154 23.88287374713806 28.49231405647179 29.100007756325 4 12.11720601542638 15.33663693425834 35.75375245974634 36.792404590568935 5 14.311921439930872 36.6503153066196 33.48478162948255 15.55298162396698 6 35.25697190668771 35.02692584576687 16.368087486448026 13.348014761097396 7 30.536480883961648 30.285982184716364 20.816097184302695 18.361439747019297 8 28.85051481534041 32.299182948612696 19.363732938357174 19.486569297689723 9 27.257935523013703 13.891761580393997 18.213668495996618 40.63663440059568 10 15.578893301343042 26.59635466938768 31.673721997003206 26.15103003226607 11 38.1744505115689 20.809719809161358 21.499970124008346 19.515859555261393 12 24.213227250581433 23.662647196712722 28.684226855299084 23.439898697406765 13 29.7933730454207 18.8847866854196 25.359028984308207 25.962811284851494 14 23.657533805833634 19.42680611860309 24.8058635080849 32.10979656747838 15 25.731674526350623 26.7263726869088 22.468756607190464 25.073196179550113 16 26.51344879255031 25.43946434645119 23.542741053289575 24.504345807708923 17 24.373465982736274 25.686400908230144 25.21091301030492 24.72922009872866 18 25.707141740897015 24.012828291185205 26.343385455448004 23.93664451246978 19 25.324614140077035 25.685998731419428 24.97971879797395 24.00966833052959 20 25.406083671161856 23.844718384306372 25.509730380666095 25.239467563865674 21 26.77273792780122 24.39627515328682 23.968071757535643 24.862915161376318 22 25.460090271457858 24.43810154160117 24.75047801586645 25.351330171074526 23 24.117624077291488 23.989616943823943 25.3075503525367 26.585208626347868 24 24.46343868067621 25.457332487612955 24.877968064863076 25.20126076684776 25 25.207580688159 24.26493569767335 24.72381943869906 25.803664175468594 26 24.615059338315728 25.04240092661537 25.375173510566906 24.96736622450199 27 25.848765432098762 24.712673395659248 24.595467582250905 24.843093589991085 28 24.685440280190836 24.0829219639098 25.6204439112729 25.611193844626456 29 24.366399161633712 24.967021501521376 25.77849939788386 24.88807993896105 30 24.957541619554526 24.687795887225025 25.829633306674754 24.52502918654569 31 24.795694180156826 24.844529935743637 24.62695228114687 25.732823602952664 32 24.609773585946336 24.76340512763943 24.709915611814345 25.916905674599892 33 24.2987185497734 24.305268286405045 25.235618157248833 26.160395006572717 34 24.951394059733598 24.78316924519456 25.657788900839286 24.607647794232555 35 26.096219078348636 24.28573398417032 25.278995798975945 24.3390511385051 36 24.66205657133927 25.19666446043959 24.9380073173198 25.20327165090134 37 26.023252714118932 24.76696726510576 24.846713181287516 24.363066839487786 38 24.674868775452047 24.570130443175863 25.107955746761903 25.647045034610187 39 25.215854039693703 24.534394160852337 24.76018771315371 25.48956408630025 40 25.62745327854536 24.777596223674657 24.96420626384637 24.630744233933612 41 24.06424946912661 25.164949946223214 25.75149609773586 25.01930448691432 42 26.26800603035401 25.135591039041028 24.925654743847844 23.67074818675712 43 25.174200012869658 23.75411369423531 25.051076454960793 26.020609837934238 44 24.743985733064907 24.670042653723467 25.226597905922798 25.359373707288825 45 24.863030069036522 24.86975216715847 25.111230615077723 25.15598714872728 46 24.413870052001492 24.63334380908771 25.6166092223792 25.3361769165316 47 24.949498083340227 24.21575521910593 25.933222562348895 24.90152413520495 48 25.612917459529523 25.77068567698997 24.24339051138505 24.373006352095455 49 24.281482400742764 25.161675077907393 25.381780701028656 25.175061820321186 50 24.27961432348612 25.88263547915975 24.47851971185722 25.359230485496916 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 7.0 1 11.5 2 16.0 3 65.0 4 114.0 5 157.5 6 201.0 7 190.0 8 179.0 9 267.0 10 355.0 11 527.0 12 699.0 13 1251.5 14 1804.0 15 2563.5 16 3323.0 17 4095.5 18 4868.0 19 5400.5 20 5933.0 21 6912.5 22 7892.0 23 8500.0 24 9108.0 25 10152.5 26 11197.0 27 13794.0 28 16391.0 29 18717.0 30 21043.0 31 22822.5 32 24602.0 33 28161.0 34 31720.0 35 36131.5 36 40543.0 37 49900.5 38 59258.0 39 65361.0 40 71464.0 41 79796.5 42 88129.0 43 91798.5 44 95468.0 45 108347.5 46 121227.0 47 131358.5 48 141490.0 49 142489.5 50 143489.0 51 134272.0 52 125055.0 53 120974.0 54 116893.0 55 119050.0 56 121207.0 57 118248.5 58 115290.0 59 105474.0 60 95658.0 61 84546.5 62 73435.0 63 64159.5 64 54884.0 65 47109.0 66 39334.0 67 34456.5 68 29579.0 69 27471.0 70 25363.0 71 19621.5 72 13880.0 73 12907.5 74 11935.0 75 8569.0 76 5203.0 77 4772.5 78 4342.0 79 3716.5 80 3091.0 81 2515.5 82 1940.0 83 1687.0 84 1434.0 85 1163.0 86 892.0 87 655.5 88 419.0 89 268.0 90 117.0 91 75.5 92 34.0 93 22.0 94 10.0 95 6.0 96 2.0 97 4.5 98 7.0 99 5.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01648924923931129 2 0.004021768107149095 3 7.46899791327689E-4 4 1.7236149030638978E-4 5 0.0 6 4.0217681071490956E-4 7 0.0 8 5.7453830102129924E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 5.7453830102129924E-5 47 0.0 48 0.0 49 0.0 50 1.1490766020425985E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1740528.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.157111362211005 #Duplication Level Percentage of deduplicated Percentage of total 1 77.70469940216663 40.52852660085935 2 13.542603830382035 14.126861922310823 3 4.085160257698271 6.39210475479742 4 1.6506956622926283 3.44382069933261 5 0.8213589749851513 2.141985576332601 6 0.47904288650633386 1.4991295907271516 7 0.3154628170030809 1.1517540493946534 8 0.21626704143146966 0.9023891331133651 9 0.16255951372951472 0.763077119451945 >10 0.840726592872346 7.949361811269491 >50 0.07880181046079579 2.8810817095430807 >100 0.08457711928242553 9.536474189794353 >500 0.01261979383793026 4.475726073708724 >1k 0.005424297351391077 4.207706769364496 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2993 0.1719593134956749 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2702 0.15524024893595506 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2545 0.14621999760992066 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2315 0.13300561668643077 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2209 0.126915510695605 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2174 0.12490462664203046 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1911 0.1097942693251703 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1903 0.10933463868435325 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1871 0.1074961161210851 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1858 0.1067492163297574 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 1820 0.10456597078587647 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1812 0.10410634014505944 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1803 0.10358925567414026 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.745383010212993E-5 0.0 3 0.0 0.0 0.0 5.745383010212993E-5 0.0 4 0.0 0.0 0.0 5.745383010212993E-5 0.0 5 0.0 0.0 0.0 1.1490766020425986E-4 0.0 6 0.0 0.0 0.0 1.1490766020425986E-4 1.1490766020425986E-4 7 0.0 0.0 0.0 1.1490766020425986E-4 1.1490766020425986E-4 8 0.0 0.0 0.0 1.1490766020425986E-4 1.1490766020425986E-4 9 0.0 0.0 0.0 1.1490766020425986E-4 1.1490766020425986E-4 10 0.0 0.0 0.0 1.1490766020425986E-4 1.1490766020425986E-4 11 0.0 0.0 0.0 1.1490766020425986E-4 1.1490766020425986E-4 12 0.0 0.0 0.0 1.1490766020425986E-4 1.7236149030638978E-4 13 0.0 0.0 0.0 1.1490766020425986E-4 2.872691505106496E-4 14 0.0 0.0 0.0 1.1490766020425986E-4 2.872691505106496E-4 15 0.0 0.0 0.0 1.7236149030638978E-4 5.170844709191693E-4 16 0.0 0.0 0.0 2.2981532040851972E-4 5.745383010212992E-4 17 0.0 0.0 0.0 3.4472298061277956E-4 6.319921311234292E-4 18 0.0 0.0 0.0 5.170844709191693E-4 6.319921311234292E-4 19 0.0 0.0 0.0 5.745383010212992E-4 6.319921311234292E-4 20 0.0 0.0 0.0 6.319921311234292E-4 8.04353621429819E-4 21 0.0 0.0 0.0 9.767151117362088E-4 0.0010341689418383387 22 0.0 0.0 0.0 0.0014937995826553782 0.0010341689418383387 23 0.0 0.0 0.0 0.002527968524493717 0.0010341689418383387 24 0.0 0.0 0.0 0.0036195912964341855 0.0010341689418383387 25 0.0 0.0 0.0 0.004653760238272524 0.0010341689418383387 26 0.0 0.0 0.0 0.005975198330621513 0.0010341689418383387 27 0.0 0.0 0.0 0.00741154408317476 0.0010341689418383387 28 0.0 0.0 0.0 0.012352573471957935 0.0010341689418383387 29 0.0 0.0 0.0 0.021257917137788074 0.0010341689418383387 30 0.0 0.0 0.0 0.03596609764393333 0.0010341689418383387 31 0.0 0.0 0.0 0.06687625823887923 0.0010916227719404686 32 0.0 0.0 0.0 0.1063470395190425 0.0010916227719404686 33 0.0 0.0 0.0 0.1447836518573674 0.0010916227719404686 34 0.0 0.0 0.0 0.18781657060386273 0.0012639842622468585 35 0.0 0.0 0.0 0.23791631045292003 0.0012639842622468585 36 0.0 0.0 0.0 0.3133531893770166 0.0012639842622468585 37 0.0 0.0 0.0 0.4307888181057702 0.0012639842622468585 38 0.0 0.0 0.0 0.5751128393223206 0.0012639842622468585 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATTA 95 9.640644E-10 25.47345 32 CGATTAA 100 1.7462298E-9 24.19978 33 CGTCTTA 285 0.0 20.841913 15 AATACGG 55 0.004484628 19.999817 5 TCGTATA 90 1.00245325E-5 19.555378 44 ATACGGT 60 0.007413772 18.333164 6 ATCGTTT 600 0.0 17.966503 29 GGCGTTA 545 0.0 17.761305 42 TACTATA 175 1.9099389E-10 17.601357 2 TTAGGAC 165 1.6607373E-9 17.333673 3 CGCAATA 640 0.0 17.187344 36 AACGAAT 90 2.2162302E-4 17.110956 31 CATCGTT 650 0.0 16.922922 28 TAGCGGC 665 0.0 16.541203 30 ATACGAA 670 0.0 16.41776 40 CAATACG 685 0.0 16.379414 38 CTATTAC 135 1.0858948E-6 16.296616 3 ATACCGT 555 0.0 16.252104 6 TCTCGTC 325 0.0 16.246006 12 CTAGGAC 245 0.0 16.163582 3 >>END_MODULE