##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062447_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1004282 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.022051575155185 32.0 32.0 32.0 32.0 32.0 2 30.7023176757126 32.0 32.0 32.0 32.0 32.0 3 30.70564542628465 32.0 32.0 32.0 32.0 32.0 4 30.74784672034349 32.0 32.0 32.0 32.0 32.0 5 30.563706210008743 32.0 32.0 32.0 32.0 32.0 6 34.162123785948566 36.0 36.0 36.0 32.0 36.0 7 34.01156049794779 36.0 36.0 36.0 32.0 36.0 8 34.00213884148078 36.0 36.0 36.0 32.0 36.0 9 34.156929029893995 36.0 36.0 36.0 32.0 36.0 10 33.8382784914994 36.0 36.0 36.0 32.0 36.0 11 34.19262418324733 36.0 36.0 36.0 32.0 36.0 12 33.96060170350559 36.0 36.0 36.0 32.0 36.0 13 34.07527069090156 36.0 36.0 36.0 32.0 36.0 14 33.96952449610767 36.0 36.0 36.0 32.0 36.0 15 33.923373116315936 36.0 36.0 36.0 32.0 36.0 16 33.90011769602562 36.0 36.0 36.0 32.0 36.0 17 33.823278720518736 36.0 36.0 36.0 32.0 36.0 18 33.84016142876204 36.0 36.0 36.0 32.0 36.0 19 33.834756572357165 36.0 36.0 36.0 32.0 36.0 20 33.81514056808745 36.0 36.0 36.0 32.0 36.0 21 33.73539902139041 36.0 36.0 36.0 32.0 36.0 22 33.69235732593037 36.0 36.0 36.0 27.0 36.0 23 33.62895182827134 36.0 36.0 36.0 27.0 36.0 24 33.61793898526509 36.0 36.0 36.0 27.0 36.0 25 33.06489711057253 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 4.0 4 50.0 5 87.0 6 171.0 7 52.0 8 138.0 9 198.0 10 121.0 11 31.0 12 75.0 13 47.0 14 241.0 15 339.0 16 537.0 17 710.0 18 976.0 19 1276.0 20 1867.0 21 2753.0 22 3880.0 23 5297.0 24 7321.0 25 9901.0 26 13378.0 27 17371.0 28 22801.0 29 30313.0 30 39059.0 31 52964.0 32 75659.0 33 107521.0 34 227418.0 35 381725.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.64321158666347 17.03494063368549 11.161643873812599 25.16020390583844 2 15.640820358398955 20.87819294912392 37.25807672239018 26.22290997008695 3 19.28832611050921 25.374119718309856 28.23354152061691 27.10401265056402 4 12.247952699210359 15.810848627713428 35.61680942749273 36.324389245583475 5 13.727484353723879 37.453843111903126 33.920469204004725 14.898203330368268 6 33.70544853563071 34.7814479020453 17.75403935601423 13.759064206309754 7 29.183240334794743 31.14936229573535 21.490035870864887 18.17736149860502 8 28.33942286034353 32.64195773808456 20.527685919937174 18.490933481634745 9 27.325280646341255 14.720689239307132 18.581613441123324 39.37241667322829 10 15.321894059779043 27.503504158134728 32.67430569816987 24.50029608391636 11 36.72134906511542 21.54685887754034 21.801578162930618 19.930213894413622 12 23.53992765443226 24.413039750180467 29.761187839244478 22.285844756142794 13 30.109145577949164 20.13311214438959 25.337067226019478 24.42067505164177 14 23.77028096754447 19.9084976182263 25.404422980676628 30.9167984335526 15 25.191274970417798 27.119625734072216 24.216831798647643 23.472267496862344 16 25.506282740780247 25.924168490098644 25.135050266910564 23.43449850221055 17 23.316933108017167 26.030497440268785 27.039435313822548 23.6131341378915 18 24.774144661079898 24.328864915525468 28.450743545387922 22.446246878006708 19 24.32731279070347 27.358256352478428 25.68978668035954 22.624644176458563 20 24.24262967789018 24.28440256300079 28.034790133623382 23.438177625485647 21 25.235077993748533 25.610066153853822 24.403643197918175 24.751212654479467 22 23.918673518333662 26.329388605397234 25.37563336866868 24.376304507600423 23 22.79979618555889 25.699565149325988 25.645420706310766 25.855217958804356 24 22.99447218544103 27.28740248552239 25.57282277491505 24.145302554121532 25 24.608638517686916 25.222812578204994 25.20686000520453 24.96168889890356 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 274.0 1 274.0 2 635.5 3 997.0 4 997.0 5 997.0 6 2694.0 7 4391.0 8 4391.0 9 4391.0 10 4198.0 11 4005.0 12 4005.0 13 4005.0 14 3794.0 15 3583.0 16 3583.0 17 3583.0 18 5798.5 19 8014.0 20 8014.0 21 8014.0 22 12557.5 23 17101.0 24 17101.0 25 17101.0 26 25022.5 27 32944.0 28 32944.0 29 32944.0 30 40648.5 31 48353.0 32 48353.0 33 48353.0 34 56717.5 35 65082.0 36 65082.0 37 65082.0 38 72387.0 39 79692.0 40 79692.0 41 79692.0 42 93794.5 43 107897.0 44 107897.0 45 107897.0 46 137211.0 47 166525.0 48 166525.0 49 166525.0 50 149973.5 51 133422.0 52 133422.0 53 133422.0 54 116664.5 55 99907.0 56 99907.0 57 99907.0 58 90722.5 59 81538.0 60 81538.0 61 81538.0 62 72048.5 63 62559.0 64 62559.0 65 62559.0 66 51926.5 67 41294.0 68 41294.0 69 41294.0 70 31465.5 71 21637.0 72 21637.0 73 21637.0 74 16763.0 75 11889.0 76 11889.0 77 11889.0 78 9756.0 79 7623.0 80 7623.0 81 7623.0 82 5365.5 83 3108.0 84 3108.0 85 3108.0 86 2241.5 87 1375.0 88 1375.0 89 1375.0 90 959.0 91 543.0 92 543.0 93 543.0 94 307.0 95 71.0 96 71.0 97 71.0 98 264.5 99 458.0 100 458.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00926034719331821 2 0.0037837977779149683 3 0.0057752702926070565 4 0.015433911988863687 5 0.03674266789606903 6 0.046899177720998685 7 0.06790921275100022 8 0.09160773567583606 9 0.09688513783977011 10 0.11829346737271007 11 0.1211811025190136 12 0.13123803871820863 13 0.1212806761447482 14 0.12426788491678634 15 0.11401180146612207 16 0.11321521246024523 17 0.12416831129105173 18 0.131138465092474 19 0.13213420134982007 20 0.12337172228517489 21 0.131138465092474 22 0.15025660123351808 23 0.1402992386600576 24 0.13482268924465438 25 0.1303418760865972 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1004282.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.27772213388192 #Duplication Level Percentage of deduplicated Percentage of total 1 79.23591238769963 41.42273010828773 2 12.839086803711153 13.423964247544035 3 3.711983962427438 5.821621984596229 4 1.4723068877985797 3.078754015045384 5 0.7348424731488242 1.920794531172441 6 0.43533981365919283 1.3655144287374732 7 0.2667188387530832 0.9760417338143739 8 0.17971198763985402 0.7515946683171129 9 0.15000274154233487 0.705762147750362 >10 0.7693568090568724 7.685664990485607 >50 0.0963728263381473 3.5501551640169984 >100 0.09541405735254753 9.839859030105897 >500 0.008760572060679804 3.0896910305212044 >1k 0.00380894437420861 4.388072132220268 >5k 1.9044721871043052E-4 0.8886856616644305 >10k+ 1.9044721871043052E-4 1.0910941257204227 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 10959 1.09122736442553 No Hit TCCATGTACTCTGCGTTGATACCAC 8926 0.8887941833070792 No Hit GAGTACATGGAAGCAGTGGTATCAA 4640 0.4620216234085645 No Hit CATGTACTCTGCGTTGATACCACTG 3811 0.37947508767457744 No Hit GTATCAACGCAGAGTACTTTTTTTT 3353 0.3338703670881287 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3035 0.30220595410452444 No Hit GCTTCCATGTACTCTGCGTTGATAC 2909 0.2896596772619643 No Hit CATGGAAGCAGTGGTATCAACGCAG 2612 0.26008631041878677 No Hit TATCAACGCAGAGTACTTTTTTTTT 2419 0.2408686006520081 No Hit GCGTTGATACCACTGCTTCCATGTA 2400 0.2389767017630506 No Hit CCCATGTACTCTGCGTTGATACCAC 2338 0.23280313696750513 No Hit GTACATGGGAAGCAGTGGTATCAAC 2184 0.21746879860437607 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1911 0.19028519877882905 No Hit GTATCAACGCAGAGTACATGGAAGC 1910 0.19018562515309445 No Hit ACTCTGCGTTGATACCACTGCTTCC 1633 0.16260373082460902 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1589 0.15822249129228644 No Hit CAGTGGTATCAACGCAGAGTACATG 1441 0.14348559468356498 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1374 0.1368141617593465 No Hit GTACATGGGGTGGTATCAACGCAAA 1234 0.12287385415650186 No Hit TATCAACGCAGAGTACATGGAAGCA 1134 0.11291649158304141 No Hit GGTATCAACGCAGAGTACTTTTTTT 1087 0.10823653117351502 No Hit GTATCAACGCAGAGTACATGGGAAG 1060 0.1055480432786807 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 9.957362573460442E-5 0.0 12 0.0 0.0 0.0 9.957362573460442E-5 1.9914725146920884E-4 13 0.0 0.0 0.0 9.957362573460442E-5 1.9914725146920884E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATACT 30 7.7220285E-4 18.999302 4 AATACCG 35 0.0021692878 16.285929 5 GTAAACG 50 0.0014976262 13.301501 17 ACGATCA 65 5.442959E-5 13.155332 9 GACGATC 65 5.4455064E-5 13.1546755 8 TATACTG 95 7.3750925E-8 13.000171 5 CGAACGA 75 1.4756322E-5 12.668097 16 CGATAAC 75 1.4756322E-5 12.668097 10 GCGTTAT 75 1.4847366E-5 12.66052 1 CGAGCCG 160 0.0 12.470778 15 CCGACCT 70 1.08951564E-4 12.215055 19 CGTTATT 70 1.094598E-4 12.208967 2 ACGCACG 55 0.00306455 12.092274 9 TTTCGTT 55 0.00306455 12.092274 17 AACCGCG 55 0.0030656948 12.091671 7 GGTTCCG 55 0.0030656948 12.091671 8 GTACGCA 55 0.0030656948 12.091671 7 AGTACGC 55 0.0030668399 12.091067 6 GTCCTAT 165 0.0 12.085043 1 CGTCTTA 80 2.8592214E-5 11.876932 15 >>END_MODULE