##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062447_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1004282 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13759282751259 32.0 32.0 32.0 32.0 32.0 2 31.331351154357044 32.0 32.0 32.0 32.0 32.0 3 31.434609999980086 32.0 32.0 32.0 32.0 32.0 4 31.56284788535491 32.0 32.0 32.0 32.0 32.0 5 31.485346745236896 32.0 32.0 32.0 32.0 32.0 6 35.057472901037755 36.0 36.0 36.0 36.0 36.0 7 35.07778890789639 36.0 36.0 36.0 36.0 36.0 8 35.02790052993084 36.0 36.0 36.0 36.0 36.0 9 35.14091062072207 36.0 36.0 36.0 36.0 36.0 10 35.019616004269714 36.0 36.0 36.0 36.0 36.0 11 35.154986348455914 36.0 36.0 36.0 36.0 36.0 12 35.056512015549416 36.0 36.0 36.0 36.0 36.0 13 35.103243909579184 36.0 36.0 36.0 36.0 36.0 14 35.05416406945459 36.0 36.0 36.0 36.0 36.0 15 35.02363579154062 36.0 36.0 36.0 36.0 36.0 16 35.01778484529246 36.0 36.0 36.0 36.0 36.0 17 34.98962144098968 36.0 36.0 36.0 36.0 36.0 18 35.00281494639952 36.0 36.0 36.0 36.0 36.0 19 34.96622860909585 36.0 36.0 36.0 36.0 36.0 20 34.956216481028235 36.0 36.0 36.0 36.0 36.0 21 34.91412870090274 36.0 36.0 36.0 32.0 36.0 22 34.895758362690955 36.0 36.0 36.0 32.0 36.0 23 34.82646408080599 36.0 36.0 36.0 32.0 36.0 24 34.80172600922848 36.0 36.0 36.0 32.0 36.0 25 34.78205225225584 36.0 36.0 36.0 32.0 36.0 26 34.70647686605953 36.0 36.0 36.0 32.0 36.0 27 34.67723507939005 36.0 36.0 36.0 32.0 36.0 28 34.639159120645395 36.0 36.0 36.0 32.0 36.0 29 34.602014175301356 36.0 36.0 36.0 32.0 36.0 30 34.57648449339926 36.0 36.0 36.0 32.0 36.0 31 34.5611860015414 36.0 36.0 36.0 32.0 36.0 32 34.50612676519145 36.0 36.0 36.0 32.0 36.0 33 34.461464011104454 36.0 36.0 36.0 32.0 36.0 34 34.427217654005545 36.0 36.0 36.0 32.0 36.0 35 34.35096018847296 36.0 36.0 36.0 32.0 36.0 36 34.308280941010594 36.0 36.0 36.0 32.0 36.0 37 34.23750201636592 36.0 36.0 36.0 32.0 36.0 38 34.17333478047003 36.0 36.0 36.0 32.0 36.0 39 34.049827638053856 36.0 36.0 36.0 32.0 36.0 40 33.97223289872765 36.0 36.0 36.0 32.0 36.0 41 33.962656903140754 36.0 36.0 36.0 32.0 36.0 42 33.81763190020333 36.0 36.0 36.0 32.0 36.0 43 33.86197900589675 36.0 36.0 36.0 32.0 36.0 44 33.82744687249199 36.0 36.0 36.0 32.0 36.0 45 33.64237335728411 36.0 36.0 36.0 27.0 36.0 46 33.74691072826158 36.0 36.0 36.0 32.0 36.0 47 33.64039781654954 36.0 36.0 36.0 27.0 36.0 48 33.63229152767848 36.0 36.0 36.0 27.0 36.0 49 33.66884600142191 36.0 36.0 36.0 27.0 36.0 50 33.055815000169275 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 8.0 21 34.0 22 107.0 23 382.0 24 1072.0 25 2561.0 26 5341.0 27 10278.0 28 16354.0 29 23079.0 30 31459.0 31 42549.0 32 61115.0 33 85990.0 34 176483.0 35 547469.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.85144590527672 17.60859476609975 11.810433940881108 25.72952538774242 2 15.093856765742952 21.293451883657642 36.8651810368606 26.747510313738804 3 18.695831408224066 25.550548058693263 28.630988417480523 27.122632115602148 4 12.067762046204292 16.134161921139444 35.855175703166154 35.942900329490115 5 13.452994278499467 37.63325440463933 33.8809218924565 15.032829424404698 6 34.09368132497309 34.99562371736084 17.246934859605467 13.663760098060596 7 29.020932367601926 31.00623131749847 21.62699321505314 18.345843099846455 8 28.405069492433398 32.73273841411078 20.33183906512314 18.53035302833268 9 27.26146640087147 14.300465407126683 18.435160642130395 40.00290754987145 10 15.250497370260543 27.50970344982784 32.6976884978522 24.54211068205942 11 36.86305240958217 21.182197828896665 21.92163157360184 20.033118187919328 12 23.482846451494698 24.388866872053867 29.760764406810043 22.367522269641395 13 30.325546011976716 19.82451144200533 25.445741335600957 24.404201210416996 14 23.704596916005663 19.614012797202378 25.455698698174416 31.225691588617536 15 25.402924676535076 26.914253167934906 24.133261374793136 23.549560780736883 16 25.64618304420472 25.60973909718585 25.251473191792744 23.492604666816693 17 23.523671638045887 25.908957842518337 26.97967304004254 23.58769747939324 18 25.006920366988556 24.021041898590237 28.41761576927596 22.55442196514525 19 24.440346436558656 27.052461360454533 25.81794754859691 22.689244654389903 20 24.283916270529595 24.044342127012133 28.122579116224326 23.549162486233946 21 25.411786729225454 25.445940482852425 24.43526818164619 24.707004606275927 22 23.99385829876469 25.866838198832596 25.623281110285756 24.516022392116955 23 22.95650026586158 25.13029208927373 25.87012412848184 26.043083516382847 24 23.197966308267997 26.990227844370406 25.633537193736423 24.178268653625175 25 24.895995347920206 24.720845340253035 25.253464664307433 25.129694647519322 26 22.93489278907717 25.464262029987594 26.58157768435559 25.019267496579644 27 25.161757355005864 25.8331823133343 25.8173501068425 23.18771022481733 28 23.847982937063495 24.49670510872444 26.435204454525717 25.220107499686346 29 23.129360080136856 26.054733630593795 27.15273200156928 23.663174287700066 30 24.773121493763703 24.96012076289329 26.957766842380927 23.308990900962083 31 23.38377069388877 25.31739093202905 26.11109230275958 25.187746071322596 32 23.316857217395114 25.884761451464826 26.196028605511202 24.602352725628858 33 23.009373861126655 25.206764633837906 26.488675491545205 25.295186013490234 34 23.099587566042207 26.189855040715653 27.42665904596518 23.28389834727696 35 25.147319179274348 25.3733513096919 26.44336949183596 23.035960019197795 36 23.69195106553737 26.200608992294995 26.212259106505943 23.895180835661698 37 24.984815022075473 25.812371425555767 26.108304241239015 23.094509311129745 38 23.834540497589323 25.82760619029316 25.50528636379025 24.832566948327262 39 23.754383728872966 25.584248248997792 26.32467772996031 24.33669029216893 40 24.92288022686855 25.683224432977987 25.630450411338646 23.763444928814813 41 22.977311153640112 25.72823171181003 26.91465146243784 24.379805672112017 42 25.560450152447224 26.08699548533181 25.968901165210568 22.3836531970104 43 24.18543795467807 24.615197723348622 25.729924463447517 25.469439858525796 44 23.684483043607273 25.397049832616737 27.1441686697561 23.77429845401989 45 24.28929324631926 25.670777729761163 25.95874465538564 24.081184368533936 46 23.378493291724833 25.21960963155767 27.026074349634865 24.37582272708263 47 24.337885175677748 24.74534045218375 27.26833698104716 23.64843739109135 48 23.89199447963819 27.523842904682148 24.874288297510063 23.709874318169597 49 22.992844639254713 25.559653563441344 27.567555726379645 23.8799460709243 50 22.879031985040058 27.74360189667842 24.58662009276279 24.79074602551873 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 22.0 1 32.5 2 43.0 3 163.0 4 283.0 5 315.5 6 348.0 7 317.5 8 287.0 9 372.5 10 458.0 11 679.5 12 901.0 13 1579.0 14 2257.0 15 2988.5 16 3720.0 17 4354.5 18 4989.0 19 5378.5 20 5768.0 21 6543.5 22 7319.0 23 7796.0 24 8273.0 25 8462.5 26 8652.0 27 10359.0 28 12066.0 29 13887.0 30 15708.0 31 17389.5 32 19071.0 33 22066.0 34 25061.0 35 28577.0 36 32093.0 37 36509.5 38 40926.0 39 42773.0 40 44620.0 41 48185.0 42 51750.0 43 54213.5 44 56677.0 45 65789.5 46 74902.0 47 82170.5 48 89439.0 49 86444.0 50 83449.0 51 74985.5 52 66522.0 53 62916.0 54 59310.0 55 59100.5 56 58891.0 57 57108.5 58 55326.0 59 50743.5 60 46161.0 61 40894.5 62 35628.0 63 31194.5 64 26761.0 65 23013.0 66 19265.0 67 16736.0 68 14207.0 69 13166.0 70 12125.0 71 9598.0 72 7071.0 73 6405.0 74 5739.0 75 4204.0 76 2669.0 77 2355.0 78 2041.0 79 1771.5 80 1502.0 81 1179.0 82 856.0 83 694.5 84 533.0 85 449.0 86 365.0 87 261.0 88 157.0 89 97.0 90 37.0 91 26.0 92 15.0 93 13.0 94 11.0 95 6.5 96 2.0 97 3.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013542013099906202 2 0.003883371403649573 3 9.957362573460443E-4 4 2.9872087720381326E-4 5 0.0 6 4.978681286730222E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1004282.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.53167048828841 #Duplication Level Percentage of deduplicated Percentage of total 1 79.73115181685917 45.8706635397924 2 12.692462239269023 14.604371104693373 3 3.615301105612524 6.239829357721336 4 1.410482961053285 3.245897637786517 5 0.6845972923794538 1.9693012921174586 6 0.3877817108876121 1.3385837767302495 7 0.28233027075601363 1.1370052474202956 8 0.17766626574868818 0.8177149646350569 9 0.13812295184550885 0.7151799737200989 >10 0.7087934161848969 7.750955005494366 >50 0.08130980698957774 3.2861281157110565 >100 0.08286281901762613 9.20727598589254 >500 0.006092854119082253 2.4420067420614897 >1k 0.0010444892775569577 1.3750872562237728 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 4289 0.4270712807757183 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3901 0.38843671399069185 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1699 0.1691755901230929 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1552 0.15453826714010607 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1221 0.12157939702195199 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1068 0.10634463228455751 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 1.9914725146920884E-4 0.0 8 0.0 0.0 0.0 1.9914725146920884E-4 0.0 9 0.0 0.0 0.0 1.9914725146920884E-4 0.0 10 0.0 0.0 0.0 1.9914725146920884E-4 0.0 11 0.0 0.0 0.0 2.9872087720381326E-4 0.0 12 0.0 0.0 0.0 2.9872087720381326E-4 0.0 13 0.0 0.0 0.0 6.97015380142231E-4 9.957362573460442E-5 14 0.0 0.0 0.0 6.97015380142231E-4 9.957362573460442E-5 15 0.0 0.0 0.0 8.961626316114398E-4 9.957362573460442E-5 16 0.0 0.0 0.0 0.0012944571345498575 9.957362573460442E-5 17 0.0 0.0 0.0 0.0014936043860190663 9.957362573460442E-5 18 0.0 0.0 0.0 0.002190619766161297 9.957362573460442E-5 19 0.0 0.0 0.0 0.002290193391895902 9.957362573460442E-5 20 0.0 0.0 0.0 0.0029872087720381325 1.9914725146920884E-4 21 0.0 0.0 0.0 0.0031863560235073415 2.9872087720381326E-4 22 0.0 0.0 0.0 0.004381239532322594 2.9872087720381326E-4 23 0.0 0.0 0.0 0.008165037310237563 2.9872087720381326E-4 24 0.0 0.0 0.0 0.012944571345498574 2.9872087720381326E-4 25 0.0 0.0 0.0 0.015334338363129082 2.9872087720381326E-4 26 0.0 0.0 0.0 0.018918988889574842 4.978681286730222E-4 27 0.0 0.0 0.0 0.02409681742777427 4.978681286730222E-4 28 0.0 0.0 0.0 0.03395460637550011 4.978681286730222E-4 29 0.0 0.0 0.0 0.04928894473862919 4.978681286730222E-4 30 0.0 0.0 0.0 0.07796614895019527 4.978681286730222E-4 31 0.0 0.0 0.0 0.12924656620351654 4.978681286730222E-4 32 0.0 0.0 0.0 0.19456686468541703 4.978681286730222E-4 33 0.0 0.0 0.0 0.2520208467342838 4.978681286730222E-4 34 0.0 0.0 0.0 0.32819467042125616 4.978681286730222E-4 35 0.0 0.0 0.0 0.4071565556287975 4.978681286730222E-4 36 0.0 0.0 0.0 0.5289350999022187 4.978681286730222E-4 37 0.0 0.0 0.0 0.7111548349965447 4.978681286730222E-4 38 0.0 9.957362573460442E-5 0.0 0.9205581699164179 4.978681286730222E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTGCGA 25 0.0023526691 35.1998 44 TCGTATA 50 2.3610319E-6 30.799826 44 CGCAATA 255 0.0 19.843025 36 TAGGACG 365 0.0 19.287561 4 GTCGTAT 80 8.98703E-5 19.249891 43 TAATACT 185 1.8189894E-12 19.026918 4 ACGATTA 70 8.122326E-4 18.857035 40 CTAGCGG 270 0.0 18.740635 29 GTATAGA 130 3.5775884E-8 18.618988 1 AATCCCG 130 3.5857738E-8 18.61528 19 CAATACG 275 0.0 18.399897 38 CGTAAAT 120 3.1608397E-7 18.33323 3 CGCCGGT 300 0.0 18.33323 7 TCTAGCG 305 0.0 18.032684 28 GTCCTAA 260 0.0 17.77267 1 TACGACG 250 0.0 17.599901 5 ACGACGG 250 0.0 17.599901 6 CGATTAA 75 0.0012907131 17.5999 41 CGGTCCA 305 0.0 17.311377 10 CGACGGT 255 0.0 17.254805 7 >>END_MODULE