##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062446_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1846898 Sequences flagged as poor quality 0 Sequence length 25 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294975683551556 32.0 32.0 32.0 32.0 32.0 2 31.101336402984895 32.0 32.0 32.0 32.0 32.0 3 31.065384769489164 32.0 32.0 32.0 32.0 32.0 4 31.109936769653764 32.0 32.0 32.0 32.0 32.0 5 31.060775419108147 32.0 32.0 32.0 32.0 32.0 6 34.720435021316824 36.0 36.0 36.0 32.0 36.0 7 34.59216589113205 36.0 36.0 36.0 32.0 36.0 8 34.61678609213936 36.0 36.0 36.0 32.0 36.0 9 34.66275560426185 36.0 36.0 36.0 32.0 36.0 10 34.46362387094469 36.0 36.0 36.0 32.0 36.0 11 34.662595876978585 36.0 36.0 36.0 32.0 36.0 12 34.52102714930657 36.0 36.0 36.0 32.0 36.0 13 34.57357092811839 36.0 36.0 36.0 32.0 36.0 14 34.53700962370418 36.0 36.0 36.0 32.0 36.0 15 34.50855217775968 36.0 36.0 36.0 32.0 36.0 16 34.55437874749986 36.0 36.0 36.0 32.0 36.0 17 34.53279065763242 36.0 36.0 36.0 32.0 36.0 18 34.565472484132854 36.0 36.0 36.0 32.0 36.0 19 34.43058035690114 36.0 36.0 36.0 32.0 36.0 20 34.40416146424978 36.0 36.0 36.0 32.0 36.0 21 34.3527330691787 36.0 36.0 36.0 32.0 36.0 22 34.309886631530276 36.0 36.0 36.0 32.0 36.0 23 34.352866806937904 36.0 36.0 36.0 32.0 36.0 24 34.28680576837486 36.0 36.0 36.0 32.0 36.0 25 33.92517561879433 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 10.0 4 64.0 5 170.0 6 309.0 7 59.0 8 258.0 9 349.0 10 224.0 11 64.0 12 168.0 13 109.0 14 320.0 15 357.0 16 548.0 17 714.0 18 876.0 19 1237.0 20 1767.0 21 2564.0 22 3633.0 23 5371.0 24 7452.0 25 10764.0 26 15542.0 27 20442.0 28 28609.0 29 39590.0 30 52222.0 31 73469.0 32 106388.0 33 159032.0 34 387579.0 35 926636.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.065110068180374 21.313692012699278 12.881169252062714 25.74002866705763 2 10.400180199399731 20.772258389045522 50.91569776098998 17.911863650564776 3 18.649742284369257 27.35521872121715 30.64761103377025 23.347427960643337 4 10.291838465362458 18.09991996265646 40.95031078099768 30.657930790983396 5 9.253127787710703 41.60348984142648 37.775561902275555 11.367820468587258 6 27.90591602732966 40.10090717872131 20.171739381263702 11.821437412685334 7 25.348531402908314 32.469456940639 24.146205747171898 18.03580590928079 8 20.40214670447913 46.96314368753885 20.442845862911575 12.191863745070442 9 26.60733138656382 15.278726231743617 22.43337517370257 35.680567207989995 10 15.288706938984381 30.021607755807423 36.97566227283668 17.71402303237152 11 31.809806322767198 19.806610081928067 32.02057607145355 16.363007523851188 12 26.809728803634748 23.322074147970635 35.83917979635874 14.02901725203587 13 30.91126822715351 24.790826167519047 26.72979739114124 17.5681082141862 14 17.044832338179535 27.862155929233666 28.199897430670834 26.893114301915965 15 17.67979640014202 44.210928585561 22.24360972357362 15.86566529072336 16 15.448465994619504 28.53094436232221 38.79915069890628 17.221438944152005 17 16.572030172362386 34.24478559602559 32.95437172896918 16.228812502642846 18 16.61901059710507 27.06588248306014 42.13815814441686 14.176948775417925 19 23.879256969301352 25.662665103776416 28.46122900860204 21.99684891832019 20 23.539906485057937 30.213241173680288 31.754584265094532 14.492268076167242 21 18.787863015986094 27.73326653936778 27.5880221938131 25.890848250833027 22 22.079490438675645 35.82465338030124 27.836132175331436 14.259724005691677 23 15.889835907707505 35.08261005591923 32.60010616684027 16.42744786953299 24 23.339823364872608 27.912015341848996 33.76670695149067 14.981454341787725 25 18.741396594040683 32.05956389711316 33.65768975745376 15.541349751392403 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 403.0 1 403.0 2 820.0 3 1237.0 4 1237.0 5 1237.0 6 2797.0 7 4357.0 8 4357.0 9 4357.0 10 4881.0 11 5405.0 12 5405.0 13 5405.0 14 7024.0 15 8643.0 16 8643.0 17 8643.0 18 15929.5 19 23216.0 20 23216.0 21 23216.0 22 45209.0 23 67202.0 24 67202.0 25 67202.0 26 112250.0 27 157298.0 28 157298.0 29 157298.0 30 217203.5 31 277109.0 32 277109.0 33 277109.0 34 286540.0 35 295971.0 36 295971.0 37 295971.0 38 286596.0 39 277221.0 40 277221.0 41 277221.0 42 266006.5 43 254792.0 44 254792.0 45 254792.0 46 243145.5 47 231499.0 48 231499.0 49 231499.0 50 187884.5 51 144270.0 52 144270.0 53 144270.0 54 97698.0 55 51126.0 56 51126.0 57 51126.0 58 37419.5 59 23713.0 60 23713.0 61 23713.0 62 17654.5 63 11596.0 64 11596.0 65 11596.0 66 8940.0 67 6284.0 68 6284.0 69 6284.0 70 4480.5 71 2677.0 72 2677.0 73 2677.0 74 1946.0 75 1215.0 76 1215.0 77 1215.0 78 897.5 79 580.0 80 580.0 81 580.0 82 406.5 83 233.0 84 233.0 85 233.0 86 163.5 87 94.0 88 94.0 89 94.0 90 73.0 91 52.0 92 52.0 93 52.0 94 52.0 95 52.0 96 52.0 97 52.0 98 352.5 99 653.0 100 653.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009691926679221051 2 0.0029779662980846805 3 0.005143759969418993 4 0.014077658863673036 5 0.03384052611459864 6 0.04575239130693736 7 0.06632743118461334 8 0.08939313378432377 9 0.09691926679221051 10 0.11857720350555365 11 0.12079714201867131 12 0.1341709179391607 13 0.12236734243038869 14 0.12409997736745612 15 0.1138666022704015 16 0.11300028480186779 17 0.12431655673458956 18 0.13168025521712623 19 0.13276315205279338 20 0.12307122537357233 21 0.13103051711572591 22 0.1517138466769686 23 0.14245507873201443 24 0.13704059455367865 25 0.13130124132464271 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1846898.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.13184191532194 #Duplication Level Percentage of deduplicated Percentage of total 1 80.38544506807169 33.06401418832721 2 11.925305336498937 9.81019547785639 3 3.0626323982010026 3.779151349426409 4 1.2616111742460878 2.075695655107751 5 0.6814458000753567 1.4014560461279828 6 0.43529287270670947 1.0742638576223238 7 0.30202674136328633 0.8696041325968163 8 0.22998000047395775 0.7567600818544397 9 0.1774780568182769 0.6569999438839103 >10 1.2608177941492558 10.181919638099574 >50 0.13528950552779034 3.8696049654273077 >100 0.11356064076334452 9.53030771592272 >500 0.014491435391301342 4.14971156194052 >1k 0.013042291852171208 11.1185132899791 >5k 9.221822521737217E-4 2.8457502787692808 >10k+ 6.587016086955156E-4 4.816051817058402 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTT 21456 1.1617317253037254 No Hit GTCCTACAGTGGACATTTCTAAATT 19549 1.0584775120228622 No Hit CTGTAGGACGTGGAATATGGCAAGA 18797 1.017760591001777 No Hit CTTTAGGACGTGAAATATGGCGAGG 17587 0.9522453324439141 No Hit GTCCTACAGTGTGCATTTCTCATTT 11489 0.622070087248998 No Hit CTGAAGGACCTGGAATATGGCGAGA 9533 0.5161627767207502 No Hit CTGTAGGACCTGGAATATGGCGAGA 9028 0.4888196316201544 No Hit GTCCTTCAGTGTGCATTTCTCATTT 8563 0.46364228019089304 No Hit ATTTAGAAATGTCCACTGTAGGACG 8047 0.43570354183068044 No Hit TTTCTAAATTTTCCACCTTTTTCAG 6529 0.3535116720035432 No Hit GAATATGGCAAGAAAACTGAAAATC 5655 0.3061890802848885 No Hit GGAATATGGCGAGAAAACTGAAAAT 5162 0.2794956732856931 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 4400 0.23823730384677444 No Hit ACCTGGAATATGGCGAGAAAACTGA 4216 0.2282746529586366 No Hit GCCATATTCCACGTCCTACAGTGGA 4100 0.22199385131176705 No Hit GAAATATGGCGAGGAAAACTGAAAA 4053 0.21944904374794927 No Hit CTGTAGGACATGGAATATGGCAAGA 4052 0.21939489890616592 No Hit CCATATTCCAGGTCCTTCAGTGTGC 3945 0.21360140083534662 No Hit GACCTGGAATATGGCGAGAAAACTG 3935 0.21305995241751302 No Hit GTATCAACGCAGAGTACTTTTTTTT 3893 0.21078586906261204 No Hit GTCCACTGTAGGACGTGGAATATGG 3768 0.20401776383969228 No Hit TTCCAGGTCCTTCAGTGTGCATTTC 3765 0.20385532931434222 No Hit CCATATTTCACGTCCTAAAGTGTGT 3716 0.2012022320669577 No Hit ACAGTGGACATTTCTAAATTTTCCA 3669 0.19865742450313983 No Hit TTGTAGAACAGTGTATATCAATGAG 3590 0.1943799820022546 No Hit ATACACACTTTAGGACGTGAAATAT 3587 0.19421754747690453 No Hit GATATACACTGTTCTACAAATCCCG 3559 0.1927014919069705 No Hit CCACTGTAGGACGTGGAATATGGCA 3294 0.17835310883438069 No Hit CACTTTAGGACGTGAAATATGGCGA 3287 0.17797409494189717 No Hit CCTAAAGTGTGTATTTCTCATTTTC 3184 0.1723971762382113 No Hit GAAATACACACTTTAGGACGTGAAA 3161 0.1711518448771941 No Hit ATTCCACGTCCTACAGTGGACATTT 3115 0.16866118215515963 No Hit GTGTATTTCTCATTTTCCGTGATTT 3048 0.16503347775567465 No Hit AGTGTGTATTTCTCATTTTCCGTGA 3030 0.16405887060357421 No Hit CTACAGTGGACATTTCTAAATTTTC 2978 0.1612433388308396 No Hit GTGTATATCAATGAGTTACAATGAA 2875 0.15566642012715376 No Hit GTAGGACGTGGAATATGGCAAGAAA 2800 0.15160555699340192 No Hit TATCAACGCAGAGTACTTTTTTTTT 2712 0.14684081091646642 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2422 0.13113880679929266 No Hit GTCCTACAGTGGACATTTCTAAATA 2409 0.130434923856109 No Hit TCCTAAAGTGTGTATTTCTCATTTT 2405 0.13021834448897557 No Hit GTTCTACAGTGTGGTTTTTATCATT 2336 0.12648235040592387 No Hit GGTCCTTCAGTGTGCATTTCTCATT 2333 0.1263199158805738 No Hit ATATTTCACGTCCTAAAGTGTGTAT 2296 0.12431655673458956 No Hit GTGTATATCAATGAGTTACAATGAG 2288 0.12388339800032269 No Hit TTTTTCAAGTCGTCAAGTGGATGTT 2287 0.12382925315853935 No Hit ACGTGGAATATGGCAAGAAAACTGA 2239 0.12123030075293817 No Hit ACGTCCTACAGTGGACATTTCTAAA 2104 0.11392074711218488 No Hit TTTCTAAATATTCCACCTTTTTCAG 2052 0.11110521533945025 No Hit GTATTTCTCATTTTCCGTGATTTTC 1980 0.10720678673104848 No Hit GATATACACTGTTCTACAATGCCGG 1974 0.10688191768034834 No Hit CCTTCAGTGTGCATTTCTCATTTTT 1941 0.10509513790149752 No Hit GTACATGGAAGCAGTGGTATCAACG 1940 0.10504099305971419 No Hit CACTGAAGGACCTGGAATATGGCGA 1916 0.1037415168569136 No Hit GTGCATTTCTCATTTTTCACGTTTT 1904 0.1030917787555133 No Hit GTGAAATATGGCGAGGAAAACTGAA 1892 0.102442040654113 No Hit CTTGACGACTTGAAAAATGACGAAA 1889 0.10227960612876294 No Hit GTCAAGTGGATGTTTCTCATTTTCC 1866 0.10103427476774571 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 5.4144841783357824E-5 0.0 8 0.0 0.0 0.0 5.4144841783357824E-5 0.0 9 0.0 0.0 0.0 1.0828968356671565E-4 0.0 10 0.0 0.0 0.0 1.0828968356671565E-4 0.0 11 0.0 0.0 0.0 1.6243452535007349E-4 0.0 12 0.0 0.0 0.0 1.6243452535007349E-4 0.0 13 0.0 0.0 0.0 1.6243452535007349E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTCC 25 0.006027226 19.002874 10 AACAGCG 50 8.7061184E-5 15.201888 7 TGTCCGC 40 0.005274301 14.252155 10 CCTACAC 260 0.0 13.877306 3 TAGGACC 2865 0.0 13.592746 4 CCAACGA 330 0.0 13.533085 19 ATGTCCG 50 0.0014977172 13.302374 9 CGCGTAT 50 0.0014983296 13.301652 7 TAAGGCC 50 0.0015017015 13.297685 4 CGTATTC 50 0.001505695 13.292997 3 ACCTTTT 1895 0.0 12.885504 15 TAGAAAT 2260 0.0 12.776537 4 CCACCTT 1910 0.0 12.68482 13 TCACGAC 60 4.110888E-4 12.659999 3 CACCTTT 1955 0.0 12.441443 14 AAATGTC 2280 0.0 12.418209 7 GTCCTAT 370 0.0 12.313831 1 TCCAACG 525 0.0 12.30796 18 AGTGCAC 70 1.0892969E-4 12.216466 8 TTAAGCA 55 0.0030728234 12.088804 4 >>END_MODULE