##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062446_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1846898 Sequences flagged as poor quality 0 Sequence length 50 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.373467294891217 32.0 32.0 32.0 32.0 32.0 2 31.54895614159526 32.0 32.0 32.0 32.0 32.0 3 31.59774443418099 32.0 32.0 32.0 32.0 32.0 4 31.669486890992356 32.0 32.0 32.0 32.0 32.0 5 31.651333749887648 32.0 32.0 32.0 32.0 32.0 6 35.27381912807313 36.0 36.0 36.0 36.0 36.0 7 35.2944943359081 36.0 36.0 36.0 36.0 36.0 8 35.229450137473755 36.0 36.0 36.0 36.0 36.0 9 35.34528436329456 36.0 36.0 36.0 36.0 36.0 10 35.263378919680456 36.0 36.0 36.0 36.0 36.0 11 35.33893479769863 36.0 36.0 36.0 36.0 36.0 12 35.30474666169978 36.0 36.0 36.0 36.0 36.0 13 35.31286676362203 36.0 36.0 36.0 36.0 36.0 14 35.29574941334064 36.0 36.0 36.0 36.0 36.0 15 35.247440302604694 36.0 36.0 36.0 36.0 36.0 16 35.297584382028674 36.0 36.0 36.0 36.0 36.0 17 35.307456611031036 36.0 36.0 36.0 36.0 36.0 18 35.309481086665315 36.0 36.0 36.0 36.0 36.0 19 35.25948265686573 36.0 36.0 36.0 36.0 36.0 20 35.23372974576831 36.0 36.0 36.0 36.0 36.0 21 35.19692316522082 36.0 36.0 36.0 36.0 36.0 22 35.17715163479521 36.0 36.0 36.0 36.0 36.0 23 35.17369448664734 36.0 36.0 36.0 36.0 36.0 24 35.163328456687914 36.0 36.0 36.0 36.0 36.0 25 35.11372528423335 36.0 36.0 36.0 36.0 36.0 26 35.09269705202995 36.0 36.0 36.0 36.0 36.0 27 35.02506635450361 36.0 36.0 36.0 36.0 36.0 28 34.96953161463167 36.0 36.0 36.0 36.0 36.0 29 34.94217060173329 36.0 36.0 36.0 36.0 36.0 30 34.88108926426906 36.0 36.0 36.0 36.0 36.0 31 34.87392319445903 36.0 36.0 36.0 36.0 36.0 32 34.84341799059829 36.0 36.0 36.0 36.0 36.0 33 34.88849465427977 36.0 36.0 36.0 36.0 36.0 34 34.84471096942008 36.0 36.0 36.0 36.0 36.0 35 34.83147472139772 36.0 36.0 36.0 36.0 36.0 36 34.74760490292371 36.0 36.0 36.0 36.0 36.0 37 34.65596963124114 36.0 36.0 36.0 32.0 36.0 38 34.621917940243584 36.0 36.0 36.0 32.0 36.0 39 34.40344566944141 36.0 36.0 36.0 32.0 36.0 40 34.515842239257395 36.0 36.0 36.0 32.0 36.0 41 34.47207588074707 36.0 36.0 36.0 32.0 36.0 42 34.48806539397411 36.0 36.0 36.0 32.0 36.0 43 34.46131188620054 36.0 36.0 36.0 32.0 36.0 44 34.35601587093603 36.0 36.0 36.0 32.0 36.0 45 34.344024412826265 36.0 36.0 36.0 32.0 36.0 46 34.17116267384555 36.0 36.0 36.0 32.0 36.0 47 34.2044157284268 36.0 36.0 36.0 32.0 36.0 48 34.14283842421184 36.0 36.0 36.0 32.0 36.0 49 34.070483047791484 36.0 36.0 36.0 32.0 36.0 50 33.70730381428753 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 20.0 21 33.0 22 136.0 23 347.0 24 979.0 25 2402.0 26 5440.0 27 10749.0 28 18432.0 29 28506.0 30 41144.0 31 58234.0 32 85321.0 33 136847.0 34 288080.0 35 1170224.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.59688550583994 22.032154368696496 13.199017433195856 26.171942692267702 2 10.182796182175654 21.27775933758246 50.30471445101854 18.234730029223346 3 18.49869943667524 27.683318786371913 30.962503492353637 22.855478284599208 4 10.28154326295203 18.648193830500105 41.2749635604031 29.795299346144766 5 9.131473421921514 41.96403916188117 37.450091992086186 11.454395424111132 6 28.317309983063403 40.03502107328652 19.863954933921278 11.783714009728797 7 25.40336575347732 32.58248835749909 24.23502772488125 17.779118164142343 8 20.490736359019284 47.03037200754996 20.284173787615774 12.194717845814983 9 26.303130979620963 15.24713330135178 22.430421171066296 36.01931454796096 10 15.374211245017321 30.361720030017903 36.503369433504176 17.7606992914606 11 31.62156220863307 19.811705898214193 32.30616958814185 16.26056230501089 12 26.890169354236132 23.35445704094108 35.67841862409294 14.07695498072985 13 30.86483389986886 24.72908628413697 26.793304232285703 17.61277558370847 14 17.097045965721982 27.960179717558848 28.153043643991165 26.789730672728002 15 17.744130969874895 44.20092501047703 22.109017390240286 15.945926629407797 16 15.598804048734689 28.710897948885105 38.259070073171344 17.431227929208866 17 16.741530934572456 34.55372197056903 32.437200105257574 16.26754698960094 18 16.798058149394283 27.270807591973135 41.700083058187296 14.231051200445288 19 24.149303318320772 25.650090042871888 28.670776621123633 21.529830017683704 20 23.84186890667487 30.354302186693584 31.493617947498997 14.310210959132558 21 18.97635927918055 27.523772292784983 27.847991605383733 25.65187682265074 22 22.483158246963285 35.30162467012255 28.027265176528427 14.187951906385734 23 16.047881366485857 35.03117118541468 32.39447982509051 16.52646762300896 24 23.60742174175293 27.99661919607905 33.323009716833305 15.072949345334719 25 19.12282107620453 32.11016526088609 33.058187295670905 15.708826367238471 26 14.020915069484074 34.502067791507706 34.61398517947391 16.86303195953431 27 16.4658254002116 33.88048500783476 31.99532405146359 17.658365540490053 28 15.222876412232836 34.48024742026901 29.228955795068273 21.067920372429878 29 19.416015394461418 29.941068754202995 28.10371769312653 22.53919815820906 30 15.681429077296094 30.40070431610192 32.45820830386952 21.459658302732475 31 22.155527809332188 27.511968717276215 31.09716941596125 19.23533405743035 32 17.574711759934765 33.11173654419464 31.432380131442017 17.881171564428573 33 15.198348798904975 33.990615616022104 35.502556177980594 15.308479407092324 34 17.82150394878331 32.82254894422973 34.32512244855969 15.030824658427267 35 15.953885921149949 34.45626125535898 33.150829119962225 16.439023703528836 36 14.76481105074563 32.190028902516545 35.70549104498462 17.33966900175321 37 16.05259196772101 31.946918562909264 29.036470882528437 22.964018586841288 38 18.074576939278725 35.929650689967715 28.796717523111724 17.19905484764183 39 21.873758052691596 28.646249007795777 30.563842724395172 18.916150215117455 40 23.547862415791236 28.452681198420272 32.62464954751156 15.374806838276939 41 22.58240574195218 26.092074386349434 34.64658037422749 16.678939497470893 42 18.815007650666143 33.529951302129305 33.008428186071995 14.646612861132557 43 15.055027402704427 34.62221519542498 33.90842374619497 16.414333655675627 44 14.52586986395567 33.715884688813354 32.289817845923274 19.468427601307706 45 15.240419340970643 34.432329235290744 31.264422832230043 19.062828591508573 46 17.10784857828951 28.332200801886408 32.863752406065316 21.69619821375877 47 22.490467800604037 28.57066280866621 30.9164339340884 18.022435456641354 48 15.401391955592567 31.345910819113996 30.81724058394129 22.435456641352147 49 20.405566522894063 28.670614186598286 30.806357470742835 20.117461819764817 50 15.87797485296968 35.989968043714384 28.805218263271716 19.326838840044225 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 80.0 1 67.5 2 55.0 3 198.5 4 342.0 5 372.0 6 402.0 7 376.0 8 350.0 9 474.5 10 599.0 11 891.0 12 1183.0 13 1970.5 14 2758.0 15 3744.5 16 4731.0 17 5580.5 18 6430.0 19 7237.0 20 8044.0 21 9436.5 22 10829.0 23 13158.5 24 15488.0 25 20374.0 26 25260.0 27 38052.5 28 50845.0 29 69917.5 30 88990.0 31 116436.0 32 143882.0 33 186054.0 34 228226.0 35 268373.5 36 308521.0 37 296406.0 38 284291.0 39 244129.0 40 203967.0 41 167975.5 42 131984.0 43 109098.5 44 86213.0 45 74953.5 46 63694.0 47 56703.0 48 49712.0 49 43727.5 50 37743.0 51 32340.0 52 26937.0 53 23105.0 54 19273.0 55 16622.0 56 13971.0 57 12015.0 58 10059.0 59 8460.0 60 6861.0 61 5772.5 62 4684.0 63 3994.5 64 3305.0 65 2818.5 66 2332.0 67 2047.5 68 1763.0 69 1442.0 70 1121.0 71 946.5 72 772.0 73 646.0 74 520.0 75 422.0 76 324.0 77 248.5 78 173.0 79 126.5 80 80.0 81 64.0 82 48.0 83 35.5 84 23.0 85 14.5 86 6.0 87 7.0 88 8.0 89 7.0 90 6.0 91 5.0 92 4.0 93 4.0 94 4.0 95 2.5 96 1.0 97 2.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016568321585707493 2 0.00471060123515213 3 3.2486905070014697E-4 4 3.2486905070014697E-4 5 0.0 6 5.414484178335782E-4 7 5.4144841783357824E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.6243452535007349E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1846898.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.33203527981093 #Duplication Level Percentage of deduplicated Percentage of total 1 81.81435792785517 46.90583655114872 2 11.46548500166881 13.146791812316385 3 2.9441153970969034 5.063763834425828 4 1.2012283304871127 2.7547546009038215 5 0.5983917322975165 1.7153507953614204 6 0.37887366076971984 1.303295885150442 7 0.26238416870110814 1.0530112891785057 8 0.194750532850036 0.8932355536096193 9 0.13996824608974345 0.7222197980583387 >10 0.8601425250190479 9.176701147529796 >50 0.07843809680913066 3.134928959221773 >100 0.05218710193035086 5.849232530997092 >500 0.005407890884801212 2.1216351711982164 >1k 0.0037950111472289205 3.9689617622566407 >5k 3.79501114722892E-4 1.6101690639100015 >10k+ 9.4875278680723E-5 0.5801112447334695 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 10665 0.5774547376195112 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 8666 0.4692191988945789 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 7890 0.42720280167069324 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 7720 0.41799817856752236 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 5326 0.2883754273381638 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 4195 0.2271376112811861 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 3300 0.1786779778850808 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 3070 0.16622466427490853 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2706 0.14651594186576627 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 2676 0.14489159661226556 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 2443 0.13227584847674317 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 2312 0.1251828742031233 No Hit ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACAC 2261 0.12242148727217203 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2086 0.11294613996008442 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAA 2082 0.11272956059295099 No Hit GACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACA 2035 0.11018475302913316 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 1990 0.10774823514888207 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAG 1980 0.10720678673104848 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 1976 0.10699020736391505 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 1901 0.10292934423016323 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAG 1852 0.10027624698277868 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 5.4144841783357824E-5 0.0 10 0.0 0.0 0.0 5.4144841783357824E-5 0.0 11 0.0 0.0 0.0 1.0828968356671565E-4 0.0 12 0.0 0.0 0.0 1.0828968356671565E-4 0.0 13 0.0 0.0 0.0 1.0828968356671565E-4 0.0 14 0.0 0.0 0.0 1.0828968356671565E-4 0.0 15 0.0 0.0 0.0 1.0828968356671565E-4 0.0 16 0.0 0.0 0.0 1.6243452535007349E-4 0.0 17 0.0 0.0 0.0 2.165793671334313E-4 0.0 18 0.0 0.0 0.0 2.707242089167891E-4 0.0 19 0.0 0.0 0.0 3.2486905070014697E-4 0.0 20 0.0 0.0 0.0 7.038829431836517E-4 0.0 21 0.0 0.0 0.0 0.0010828968356671564 0.0 22 5.4144841783357824E-5 0.0 0.0 0.002165793671334313 0.0 23 5.4144841783357824E-5 0.0 0.0 0.0032486905070014693 0.0 24 5.4144841783357824E-5 0.0 0.0 0.005089615127635635 0.0 25 5.4144841783357824E-5 0.0 0.0 0.0062808016468695075 0.0 26 5.4144841783357824E-5 0.0 0.0 0.008338305634637106 0.0 27 5.4144841783357824E-5 0.0 0.0 0.010828968356671565 0.0 28 5.4144841783357824E-5 0.0 0.0 0.016568321585707493 0.0 29 5.4144841783357824E-5 0.0 0.0 0.026206103423145187 0.0 30 5.4144841783357824E-5 0.0 0.0 0.04537337741445386 0.0 31 5.4144841783357824E-5 0.0 0.0 0.09919335014711153 0.0 32 5.4144841783357824E-5 5.4144841783357824E-5 0.0 0.17607902547947965 0.0 33 5.4144841783357824E-5 5.4144841783357824E-5 0.0 0.25199009365974734 0.0 34 5.4144841783357824E-5 5.4144841783357824E-5 0.0 0.33374880475261764 0.0 35 5.4144841783357824E-5 5.4144841783357824E-5 0.0 0.42297950401159135 0.0 36 5.4144841783357824E-5 5.4144841783357824E-5 0.0 0.549732578626432 0.0 37 5.4144841783357824E-5 5.4144841783357824E-5 0.0 0.7600311441129938 0.0 38 5.4144841783357824E-5 5.4144841783357824E-5 0.0 1.0087184024239564 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGGA 35 3.2186657E-4 31.428322 36 ATCGCGG 40 7.033874E-4 27.49978 35 TAGGACC 3620 0.0 26.98394 4 GCGGGGT 90 5.14774E-10 26.888674 44 CTGCGCA 45 0.0013985583 24.444248 9 CACTCGG 55 1.594149E-4 23.99981 14 ACTGTTC 1565 0.0 22.772982 8 ATGGGCG 140 7.2759576E-12 22.000422 5 TTGGACG 100 4.6264176E-8 22.00042 4 AGGCGGG 120 5.984475E-10 21.999825 42 CGAGGAC 90 4.0845407E-7 21.999825 21 AGGACCT 7600 0.0 21.247774 5 GATATAC 1745 0.0 21.184935 1 GCGATAA 125 9.968062E-10 21.119831 20 TGTAGGA 12370 0.0 21.111155 2 CTGTAGG 12045 0.0 20.99068 1 GGACCTG 7520 0.0 20.917952 6 GTCTTAC 330 0.0 20.670979 1 ATAGGAC 630 0.0 20.603569 3 GCGACAA 75 5.474976E-5 20.53317 20 >>END_MODULE