##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062445_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1726730 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30285626588986 32.0 32.0 32.0 32.0 32.0 2 31.436091919408362 32.0 32.0 32.0 32.0 32.0 3 31.509804080545308 32.0 32.0 32.0 32.0 32.0 4 31.60729529225762 32.0 32.0 32.0 32.0 32.0 5 31.54463523538712 32.0 32.0 32.0 32.0 32.0 6 35.140528629258775 36.0 36.0 36.0 36.0 36.0 7 35.15717338553219 36.0 36.0 36.0 36.0 36.0 8 35.094162955412834 36.0 36.0 36.0 36.0 36.0 9 35.218459747615434 36.0 36.0 36.0 36.0 36.0 10 35.09803501415971 36.0 36.0 36.0 36.0 36.0 11 35.22551875510358 36.0 36.0 36.0 36.0 36.0 12 35.13592339277131 36.0 36.0 36.0 36.0 36.0 13 35.17894749034302 36.0 36.0 36.0 36.0 36.0 14 35.143685463274515 36.0 36.0 36.0 36.0 36.0 15 35.10013493713551 36.0 36.0 36.0 36.0 36.0 16 35.11082798121304 36.0 36.0 36.0 36.0 36.0 17 35.07785525241352 36.0 36.0 36.0 36.0 36.0 18 35.09727114256427 36.0 36.0 36.0 36.0 36.0 19 35.074433756290794 36.0 36.0 36.0 36.0 36.0 20 35.06130547335136 36.0 36.0 36.0 36.0 36.0 21 35.0550954694712 36.0 36.0 36.0 36.0 36.0 22 35.04220752520661 36.0 36.0 36.0 36.0 36.0 23 34.98777400056755 36.0 36.0 36.0 36.0 36.0 24 34.96370770184105 36.0 36.0 36.0 32.0 36.0 25 34.93321422573303 36.0 36.0 36.0 32.0 36.0 26 34.88780353616373 36.0 36.0 36.0 32.0 36.0 27 34.86559797999687 36.0 36.0 36.0 32.0 36.0 28 34.84239921701714 36.0 36.0 36.0 32.0 36.0 29 34.80932456145431 36.0 36.0 36.0 32.0 36.0 30 34.80016505186103 36.0 36.0 36.0 32.0 36.0 31 34.797528275989876 36.0 36.0 36.0 32.0 36.0 32 34.75344263434353 36.0 36.0 36.0 32.0 36.0 33 34.73125155641009 36.0 36.0 36.0 32.0 36.0 34 34.71195786254944 36.0 36.0 36.0 32.0 36.0 35 34.67446039624029 36.0 36.0 36.0 32.0 36.0 36 34.65167455247781 36.0 36.0 36.0 32.0 36.0 37 34.62185402465933 36.0 36.0 36.0 32.0 36.0 38 34.576781546622804 36.0 36.0 36.0 32.0 36.0 39 34.53392192178279 36.0 36.0 36.0 32.0 36.0 40 34.50454095313106 36.0 36.0 36.0 32.0 36.0 41 34.48598738656304 36.0 36.0 36.0 32.0 36.0 42 34.41838677731898 36.0 36.0 36.0 32.0 36.0 43 34.428643737005785 36.0 36.0 36.0 32.0 36.0 44 34.39407087384826 36.0 36.0 36.0 32.0 36.0 45 34.3106391850492 36.0 36.0 36.0 32.0 36.0 46 34.35258088989014 36.0 36.0 36.0 32.0 36.0 47 34.30435157783788 36.0 36.0 36.0 32.0 36.0 48 34.28171283292698 36.0 36.0 36.0 32.0 36.0 49 34.283094635524954 36.0 36.0 36.0 32.0 36.0 50 33.74861790783736 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 9.0 21 33.0 22 140.0 23 416.0 24 1230.0 25 2814.0 26 5866.0 27 11179.0 28 19157.0 29 29079.0 30 40698.0 31 58325.0 32 86325.0 33 135141.0 34 295449.0 35 1040865.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.76767758676613 17.462351142208423 11.4275288448172 26.34244242620824 2 16.42591228362801 20.066185737054745 36.03323418214167 27.474667797175584 3 18.764199617888032 23.61015312856348 28.459986830514982 29.16566042303351 4 12.479810045027437 15.09024309024309 35.00262056783796 37.427326296891515 5 14.603441186520186 36.344130234605295 33.14913159555923 15.903296983315284 6 35.8344264431221 34.43611461002765 16.020501237892542 13.708957708957708 7 30.75861933169594 30.04374166415228 20.42561397880038 18.772025025351404 8 28.860579743549795 32.35226836405713 19.154945564706445 19.632206327686628 9 27.218731359274468 13.818663022012705 18.289020286900673 40.67358533181215 10 15.979684142859623 26.355249517874828 31.118414575527154 26.546651763738392 11 38.47538410753273 20.436779345931328 21.43890475059795 19.648931795937987 12 24.63899972780921 23.31777405848048 28.303208955656068 23.74001725805424 13 29.96588928205336 18.700317942005988 25.11295917717304 26.220833598767612 14 23.75519044668246 19.340371685208456 24.343875417697035 32.56056245041205 15 25.759093778413533 26.884863296520013 22.17115588424363 25.18488704082283 16 26.60913981919582 25.120487858553453 23.540391375605914 24.729980946644815 17 24.48582001818466 25.617033352058517 25.126047500188214 24.771099129568608 18 25.886733884278375 23.685579100380487 26.376735216275847 24.050951799065285 19 25.753939527314635 25.254787951793272 24.644848934112456 24.346423586779636 20 25.659367706589915 23.747430113567265 25.256467426870444 25.336734752972383 21 26.92297000689164 24.129250085421578 23.760460523648746 25.187319384038037 22 25.676104544427908 24.285151702929817 24.584851134803937 25.453892617838342 23 24.19498126516595 23.697798729390236 25.148343979660975 26.958876025782843 24 24.847428376179252 25.21957688810642 24.64091085462116 25.292083881093163 25 25.49147811180671 23.942538787187342 24.64670214799071 25.91928095301524 26 24.560527702651832 24.88680917109218 25.437561170536217 25.11510195571977 27 25.98176900847266 24.39906644350883 24.638652250207038 24.98051229781147 28 24.75928489109473 23.891517492601622 25.428642578747112 25.920555037556536 29 24.528096459782365 24.59736032848216 25.57058717923474 25.30395603250074 30 24.960474422752835 24.46520301378907 25.72828409768754 24.84603846577056 31 25.08707209581116 24.462770670573857 24.36599815836871 26.084159075246276 32 24.871809721265052 24.510375102071546 24.46520301378907 26.152612162874334 33 24.467809095805364 23.989448263480682 25.208457604836887 26.334285035877063 34 25.227453047089003 24.47597481945643 25.561610674511936 24.734961458942625 35 26.263341692100095 24.172858524494277 25.15639387744465 24.407405905960978 36 24.734613981340452 25.045548522351496 24.728706862103515 25.491130634204538 37 26.102112084691875 24.52259473108129 24.677396002849317 24.697897181377517 38 24.97946986500495 24.2968501155363 24.889588991909566 25.83409102754918 39 25.51070520579361 23.99576077325349 24.75106125450997 25.74247276644293 40 25.999606192050873 24.377696570975196 24.906383742681253 24.71631349429268 41 24.324011281439482 24.651277269752654 25.823666699483994 25.201044749323863 42 26.44403004523 24.96950884040933 24.723958001540485 23.862503112820185 43 25.194905978352146 23.577281914369934 25.052729726129737 26.17508238114818 44 24.80914792700654 24.411286072518575 25.17608427490111 25.603481725573772 45 24.932618301645306 24.672936706954765 25.014912580426586 25.379532410973344 46 24.587457216820233 24.218378090378927 25.576146820869504 25.618017871931336 47 25.208341778969494 23.785478911005196 25.85928315370672 25.146896156318594 48 25.75781969387223 25.41074748223521 24.076086012289124 24.755346811603435 49 24.385051513554522 24.801792984427212 25.30470890063878 25.508446601379486 50 24.44593216422496 25.710983020497135 24.254587720481904 25.588497094795997 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 8.0 1 16.5 2 25.0 3 83.0 4 141.0 5 160.0 6 179.0 7 203.5 8 228.0 9 294.0 10 360.0 11 550.0 12 740.0 13 1377.5 14 2015.0 15 2690.5 16 3366.0 17 4040.5 18 4715.0 19 5068.0 20 5421.0 21 6154.5 22 6888.0 23 7335.0 24 7782.0 25 8652.5 26 9523.0 27 12123.0 28 14723.0 29 16937.5 30 19152.0 31 20789.5 32 22427.0 33 26566.0 34 30705.0 35 35887.5 36 41070.0 37 50347.0 38 59624.0 39 64305.0 40 68986.0 41 75748.0 42 82510.0 43 85347.0 44 88184.0 45 101399.5 46 114615.0 47 126062.5 48 137510.0 49 138311.5 50 139113.0 51 130230.5 52 121348.0 53 119890.5 54 118433.0 55 121941.0 56 125449.0 57 122746.5 58 120044.0 59 111327.5 60 102611.0 61 90049.5 62 77488.0 63 67780.5 64 58073.0 65 49704.0 66 41335.0 67 36108.5 68 30882.0 69 28717.5 70 26553.0 71 20544.5 72 14536.0 73 13328.0 74 12120.0 75 8690.0 76 5260.0 77 4790.5 78 4321.0 79 3740.0 80 3159.0 81 2588.0 82 2017.0 83 1772.5 84 1528.0 85 1249.0 86 970.0 87 683.5 88 397.0 89 257.0 90 117.0 91 74.0 92 31.0 93 26.0 94 21.0 95 16.0 96 11.0 97 11.0 98 11.0 99 8.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014478233423870552 2 0.004285557093465684 3 6.370422706503044E-4 4 2.8956466847741103E-4 5 0.0 6 2.8956466847741103E-4 7 5.7912933695482215E-5 8 5.7912933695482215E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 5.7912933695482215E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1726730.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.629792936832885 #Duplication Level Percentage of deduplicated Percentage of total 1 78.41207944757366 39.69987346177143 2 12.827945949411612 12.989524944471881 3 3.7724268835487234 5.7299157595024095 4 1.6143508165383604 3.2693699027497707 5 0.8824079648842054 2.233806627394971 6 0.5131301191121298 1.5587803008179715 7 0.36253378085876703 1.2848507180240565 8 0.23957326055648195 0.9703635660141273 9 0.1855022555431444 0.8452746708718375 >10 0.9906933233962103 9.104390325684724 >50 0.08855140475926973 3.1528063694464827 >100 0.09206943879175837 10.167346538759347 >500 0.012873372778408153 4.533859984212938 >1k 0.005861982247310856 4.459836830277978 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3264 0.18902781558205395 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2825 0.16360403768973725 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2590 0.14999449827129893 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2345 0.13580582951590578 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2312 0.13389470270395487 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2208 0.1278717575996247 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2113 0.12237002889855392 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2001 0.1158837803246599 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1963 0.11368308884423158 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1963 0.11368308884423158 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1856 0.10748640493881498 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1836 0.10632814626490535 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1804 0.10447493238664991 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 5.7912933695482215E-5 8 0.0 0.0 0.0 5.7912933695482215E-5 5.7912933695482215E-5 9 0.0 0.0 0.0 5.7912933695482215E-5 5.7912933695482215E-5 10 0.0 0.0 0.0 5.7912933695482215E-5 5.7912933695482215E-5 11 0.0 0.0 0.0 5.7912933695482215E-5 5.7912933695482215E-5 12 0.0 0.0 0.0 5.7912933695482215E-5 1.7373880108644663E-4 13 0.0 0.0 0.0 5.7912933695482215E-5 1.7373880108644663E-4 14 0.0 0.0 0.0 5.7912933695482215E-5 1.7373880108644663E-4 15 0.0 0.0 0.0 1.1582586739096443E-4 4.053905358683755E-4 16 0.0 0.0 0.0 1.1582586739096443E-4 4.633034695638577E-4 17 0.0 0.0 0.0 1.1582586739096443E-4 5.212164032593399E-4 18 0.0 5.7912933695482215E-5 0.0 1.1582586739096443E-4 5.212164032593399E-4 19 0.0 5.7912933695482215E-5 0.0 1.1582586739096443E-4 5.212164032593399E-4 20 0.0 5.7912933695482215E-5 0.0 1.7373880108644663E-4 5.212164032593399E-4 21 0.0 5.7912933695482215E-5 0.0 2.3165173478192886E-4 5.212164032593399E-4 22 0.0 5.7912933695482215E-5 0.0 8.10781071736751E-4 5.791293369548221E-4 23 0.0 5.7912933695482215E-5 0.0 0.0015057362760825376 5.791293369548221E-4 24 0.0 5.7912933695482215E-5 0.0 0.002953559618469593 5.791293369548221E-4 25 0.0 5.7912933695482215E-5 0.0 0.0037064277565108618 5.791293369548221E-4 26 0.0 5.7912933695482215E-5 0.0 0.00498051229781147 6.949552043457865E-4 27 0.0 5.7912933695482215E-5 0.0 0.007297029645630759 6.949552043457865E-4 28 0.0 5.7912933695482215E-5 0.0 0.011872151407573854 6.949552043457865E-4 29 0.0 5.7912933695482215E-5 0.0 0.021891088936892275 6.949552043457865E-4 30 0.0 1.7373880108644663E-4 0.0 0.04030740185205562 6.949552043457865E-4 31 0.0 1.7373880108644663E-4 0.0 0.08015150023454738 6.949552043457865E-4 32 0.0 1.7373880108644663E-4 0.0 0.12821923520179762 7.528681380412688E-4 33 0.0 1.7373880108644663E-4 0.0 0.17362297521905568 7.528681380412688E-4 34 0.0 1.7373880108644663E-4 0.0 0.22829278462759087 8.686940054322332E-4 35 0.0 1.7373880108644663E-4 0.0 0.28603197952198667 8.686940054322332E-4 36 0.0 1.7373880108644663E-4 0.0 0.3786347605010627 8.686940054322332E-4 37 0.0 1.7373880108644663E-4 0.0 0.5154251098897917 8.686940054322332E-4 38 0.0 1.7373880108644663E-4 0.0 0.6960555500860007 9.266069391277154E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGACGG 70 8.125751E-4 18.85697 5 TAGGACG 450 0.0 18.577606 4 GTGTACG 135 5.5119017E-8 17.930954 1 GTCCTAA 375 0.0 17.604937 1 GATCTAG 100 2.4780336E-5 17.604937 1 CGTCGTA 515 0.0 17.514402 10 GTATTAG 560 0.0 16.897594 1 GTCCTAC 535 0.0 16.864542 1 ACCGTCG 535 0.0 16.85966 8 TACCGTC 575 0.0 16.834627 7 GTATAGG 170 2.4610927E-9 16.828247 1 TCCTACA 550 0.0 16.801792 2 GGCGTTA 620 0.0 16.677265 42 ATACCGT 545 0.0 16.550306 6 TGGTATA 375 0.0 16.426516 44 GTATTAC 175 3.614332E-9 16.34744 1 CGTTAGG 95 3.347588E-4 16.210377 15 CCGTCGT 575 0.0 16.069416 9 CTATTCC 630 0.0 16.063345 4 CGTGATT 275 0.0 15.999852 28 >>END_MODULE