##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062444_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1273485 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.189119620568754 32.0 32.0 32.0 32.0 32.0 2 31.437453130582615 32.0 32.0 32.0 32.0 32.0 3 31.512254953925645 32.0 32.0 32.0 32.0 32.0 4 31.609338939995368 32.0 32.0 32.0 32.0 32.0 5 31.54960992866033 32.0 32.0 32.0 32.0 32.0 6 35.135352988060326 36.0 36.0 36.0 36.0 36.0 7 35.14813837618818 36.0 36.0 36.0 36.0 36.0 8 35.101572456683826 36.0 36.0 36.0 36.0 36.0 9 35.20200709077845 36.0 36.0 36.0 36.0 36.0 10 35.090906449624455 36.0 36.0 36.0 36.0 36.0 11 35.208205828886875 36.0 36.0 36.0 36.0 36.0 12 35.11242221149052 36.0 36.0 36.0 36.0 36.0 13 35.15591781607164 36.0 36.0 36.0 36.0 36.0 14 35.10805702462141 36.0 36.0 36.0 36.0 36.0 15 35.086683392423154 36.0 36.0 36.0 36.0 36.0 16 35.09914839986337 36.0 36.0 36.0 36.0 36.0 17 35.07147316222806 36.0 36.0 36.0 36.0 36.0 18 35.083767771116264 36.0 36.0 36.0 36.0 36.0 19 35.052459196614016 36.0 36.0 36.0 36.0 36.0 20 35.02725670109974 36.0 36.0 36.0 36.0 36.0 21 35.02590529138545 36.0 36.0 36.0 36.0 36.0 22 35.01831352548322 36.0 36.0 36.0 36.0 36.0 23 34.985297039227 36.0 36.0 36.0 36.0 36.0 24 34.96437256818887 36.0 36.0 36.0 32.0 36.0 25 34.93639344004837 36.0 36.0 36.0 32.0 36.0 26 34.90293957133378 36.0 36.0 36.0 32.0 36.0 27 34.88381253018292 36.0 36.0 36.0 32.0 36.0 28 34.87787999073409 36.0 36.0 36.0 32.0 36.0 29 34.845210583556145 36.0 36.0 36.0 32.0 36.0 30 34.82215102651386 36.0 36.0 36.0 32.0 36.0 31 34.83500080487795 36.0 36.0 36.0 32.0 36.0 32 34.783837265456604 36.0 36.0 36.0 32.0 36.0 33 34.746107728006216 36.0 36.0 36.0 32.0 36.0 34 34.717780735540664 36.0 36.0 36.0 32.0 36.0 35 34.69451937007503 36.0 36.0 36.0 32.0 36.0 36 34.66471140217592 36.0 36.0 36.0 32.0 36.0 37 34.6487913088886 36.0 36.0 36.0 32.0 36.0 38 34.60643980887093 36.0 36.0 36.0 32.0 36.0 39 34.601626246088486 36.0 36.0 36.0 32.0 36.0 40 34.5839841066051 36.0 36.0 36.0 32.0 36.0 41 34.532784445831716 36.0 36.0 36.0 32.0 36.0 42 34.50108638892488 36.0 36.0 36.0 32.0 36.0 43 34.47970961573949 36.0 36.0 36.0 32.0 36.0 44 34.4384205546198 36.0 36.0 36.0 32.0 36.0 45 34.38166841384076 36.0 36.0 36.0 32.0 36.0 46 34.36893171101348 36.0 36.0 36.0 32.0 36.0 47 34.31555377566285 36.0 36.0 36.0 32.0 36.0 48 34.26644836806087 36.0 36.0 36.0 32.0 36.0 49 34.24136130382376 36.0 36.0 36.0 32.0 36.0 50 33.708554085835324 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 6.0 21 31.0 22 120.0 23 345.0 24 965.0 25 2178.0 26 4617.0 27 8609.0 28 14365.0 29 21299.0 30 30337.0 31 41895.0 32 61983.0 33 98183.0 34 213532.0 35 775019.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.04747973966878 18.12815665738109 11.530580750348896 26.293782852601232 2 16.843106290181865 20.710695295929337 35.522907048606555 26.923291365282243 3 18.70223223154838 24.473823282519774 28.42567486389646 28.398269622035382 4 12.850593883541345 15.590797514216925 35.000023557458995 36.55858504478273 5 14.90743903540285 36.319312752015136 32.39315735952917 16.38009085305284 6 34.24911934089164 34.90315498186855 16.66397063789088 14.183755039348933 7 30.287675159110627 30.372638861078066 20.639033832357665 18.700652147453642 8 29.096455788642977 30.994318739521866 19.668704382069674 20.240521089765487 9 28.39295319536547 13.551082266379266 18.70795494253957 39.348009595715695 10 17.121599390648495 25.740860708999318 30.061759659516994 27.07578024083519 11 38.0226700746377 20.82191780821918 21.729898663902596 19.425513453240516 12 25.322795321499665 23.617474881918515 27.779125784756005 23.28060401182582 13 30.008441402921903 18.92421190669698 25.248353926430227 25.81899276395089 14 24.396910839153975 19.217266006274123 24.58246465407916 31.80335850049274 15 26.18829432619937 26.160261016030812 22.16335488835754 25.48808976941228 16 26.398818988837718 25.13998987031649 23.220375583536516 25.240815557309272 17 24.41591381131305 24.982233791524834 24.934333737735425 25.66751865942669 18 25.534969002383225 23.806483782690805 26.162381182346085 24.49616603257989 19 26.208004020463534 24.264596756145536 25.316199248518828 24.211199974872102 20 26.439651821576227 23.125439247419482 24.866881039038542 25.568027891965748 21 27.94096514682152 23.123790229174272 24.037110762985037 24.898133861019172 22 26.619865958374067 23.525915106970245 24.543202314907518 25.311016619748173 23 25.02667875946713 23.332430299532387 25.201945841529344 26.438945099471134 24 25.15757939826539 24.500563414567115 24.891066639968276 25.45079054719922 25 25.395038025575488 23.708092360726667 25.032489585664536 25.864380028033313 26 24.95467162942634 24.433503339261947 25.54721885220478 25.064606179106942 27 26.089510280843513 24.204839475926295 24.565817422270385 25.139832820959807 28 24.881015481140338 24.017479593399216 25.53512605173991 25.56637887372054 29 24.833508050742648 24.330007813205494 25.337872059741574 25.498612076310284 30 24.78623619437999 24.419525946516842 25.696729839770395 25.097508019332775 31 25.219927992869962 24.37908573717005 24.448030404755457 25.952955865204537 32 25.017255798065936 24.320820425839333 24.57720350063016 26.084720275464573 33 24.88502023973584 23.891918632728302 25.114547874533265 26.108513253002585 34 25.557584109746088 23.851321374024824 25.475290246842324 25.11580426938676 35 26.223866005488876 23.899142903135882 25.00846103409149 24.868530057283753 36 24.937788823582533 24.56746644051559 24.665229665052983 25.829515070848892 37 26.00996478168176 24.468368296446368 24.472451579720218 25.049215342151655 38 24.927423566041217 24.11602806472004 25.262095745140307 25.69445262409844 39 25.441132011762996 23.9287467068713 24.771552079529794 25.858569201835905 40 25.75585892256289 24.20853013580843 25.206264698838226 24.829346242790454 41 24.425336772714246 24.7492510708803 25.66382799954456 25.1615841568609 42 25.96065128368218 24.698210029957167 25.054240921565622 24.286897764795032 43 24.94320702638822 23.674640847752425 25.201160594745915 26.180991531113442 44 24.453998280309545 24.27731775403715 25.21780782655469 26.050876139098616 45 24.704806102938 24.41897627376844 25.20202436620769 25.67419325708587 46 24.58387809828934 24.20821603709506 25.309917274251365 25.897988590364236 47 24.48941291024237 24.101108375834816 25.736384802333756 25.673093911589064 48 25.25408622794929 24.91792207996168 24.65188046973463 25.176111222354407 49 24.10770444881565 24.930093405104888 25.248510975786914 25.713691170292545 50 24.053443896080438 25.308582354719526 24.82565558290832 25.81231816629171 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 40.0 2 38.0 3 109.0 4 180.0 5 228.0 6 276.0 7 287.5 8 299.0 9 407.0 10 515.0 11 719.5 12 924.0 13 1652.0 14 2380.0 15 3386.5 16 4393.0 17 5334.5 18 6276.0 19 6811.5 20 7347.0 21 7857.0 22 8367.0 23 8594.0 24 8821.0 25 8940.5 26 9060.0 27 10250.5 28 11441.0 29 13138.5 30 14836.0 31 16172.0 32 17508.0 33 19977.5 34 22447.0 35 26045.0 36 29643.0 37 35682.0 38 41721.0 39 45727.5 40 49734.0 41 54462.0 42 59190.0 43 59850.5 44 60511.0 45 67280.5 46 74050.0 47 79607.0 48 85164.0 49 89693.5 50 94223.0 51 91003.5 52 87784.0 53 86590.5 54 85397.0 55 88176.0 56 90955.0 57 90177.0 58 89399.0 59 81994.0 60 74589.0 61 66615.0 62 58641.0 63 52521.0 64 46401.0 65 40611.5 66 34822.0 67 31261.5 68 27701.0 69 25479.5 70 23258.0 71 19000.0 72 14742.0 73 13113.5 74 11485.0 75 8698.5 76 5912.0 77 5292.0 78 4672.0 79 4019.0 80 3366.0 81 2704.5 82 2043.0 83 1741.0 84 1439.0 85 1178.5 86 918.0 87 657.0 88 396.0 89 258.5 90 121.0 91 77.0 92 33.0 93 23.0 94 13.0 95 8.5 96 4.0 97 4.0 98 4.0 99 4.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014448540815164687 2 0.004397381987224035 3 4.7114807005971796E-4 4 2.3557403502985898E-4 5 0.0 6 5.496727484030044E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1273485.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.83934878194055 #Duplication Level Percentage of deduplicated Percentage of total 1 77.26193523730736 39.27946473097172 2 13.517638617166677 13.744558887327308 3 4.146658934332376 6.324403195268208 4 1.6933907043797096 3.443635225762242 5 0.9016312992920883 2.2919174048712354 6 0.4994108434639194 1.523383323380719 7 0.33798006975235856 1.202788065323933 8 0.23186588827487867 0.9430328611712814 9 0.179803443726392 0.8226980989020057 >10 0.9940180750536438 9.703240656460567 >50 0.1146751718771298 4.105679221838251 >100 0.10760010312452911 11.25840491513738 >500 0.010900149504894839 3.745385469661676 >1k 0.002491462743975963 1.6114079439234725 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1638 0.12862342312630304 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1447 0.11362520956273532 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1380 0.10836405611373515 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1371 0.10765733400864556 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1361 0.10687208722521271 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1301 0.10216060652461553 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1296 0.1017679831328991 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1296 0.1017679831328991 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1290 0.10129683506283936 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1283 0.10074716231443637 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 7.852467834328634E-5 0.0 10 7.852467834328634E-5 0.0 0.0 7.852467834328634E-5 0.0 11 7.852467834328634E-5 0.0 0.0 7.852467834328634E-5 0.0 12 7.852467834328634E-5 0.0 0.0 7.852467834328634E-5 7.852467834328634E-5 13 7.852467834328634E-5 0.0 0.0 7.852467834328634E-5 7.852467834328634E-5 14 7.852467834328634E-5 0.0 0.0 7.852467834328634E-5 7.852467834328634E-5 15 7.852467834328634E-5 0.0 0.0 7.852467834328634E-5 1.5704935668657267E-4 16 7.852467834328634E-5 0.0 0.0 1.5704935668657267E-4 1.5704935668657267E-4 17 7.852467834328634E-5 0.0 0.0 1.5704935668657267E-4 1.5704935668657267E-4 18 7.852467834328634E-5 0.0 0.0 2.35574035029859E-4 2.35574035029859E-4 19 7.852467834328634E-5 0.0 0.0 3.1409871337314535E-4 2.35574035029859E-4 20 7.852467834328634E-5 0.0 0.0 3.1409871337314535E-4 2.35574035029859E-4 21 7.852467834328634E-5 0.0 0.0 3.1409871337314535E-4 3.1409871337314535E-4 22 7.852467834328634E-5 0.0 0.0 0.0012563948534925814 3.1409871337314535E-4 23 7.852467834328634E-5 0.0 0.0 0.0027483637420150217 3.1409871337314535E-4 24 7.852467834328634E-5 0.0 0.0 0.004632956022253894 3.1409871337314535E-4 25 7.852467834328634E-5 0.0 0.0 0.005653776840716616 3.1409871337314535E-4 26 7.852467834328634E-5 0.0 0.0 0.0072242704075823425 3.926233917164317E-4 27 7.852467834328634E-5 0.0 0.0 0.010600831576343655 5.496727484030044E-4 28 7.852467834328634E-5 0.0 0.0 0.02120166315268731 5.496727484030044E-4 29 7.852467834328634E-5 0.0 0.0 0.0448375913340165 5.496727484030044E-4 30 7.852467834328634E-5 0.0 0.0 0.08983223202471957 5.496727484030044E-4 31 7.852467834328634E-5 0.0 0.0 0.18688873445702148 5.496727484030044E-4 32 7.852467834328634E-5 0.0 0.0 0.2967447594592791 5.496727484030044E-4 33 7.852467834328634E-5 0.0 0.0 0.4113122651621338 5.496727484030044E-4 34 7.852467834328634E-5 0.0 0.0 0.5393860155400338 5.496727484030044E-4 35 7.852467834328634E-5 0.0 0.0 0.6827720781948747 5.496727484030044E-4 36 7.852467834328634E-5 0.0 0.0 0.8896846056294342 5.496727484030044E-4 37 7.852467834328634E-5 0.0 0.0 1.1788909959677578 5.496727484030044E-4 38 7.852467834328634E-5 0.0 0.0 1.5562020754072485 7.852467834328634E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCCGC 70 1.1323937E-6 25.142746 32 CGATTAG 70 1.1323937E-6 25.142746 14 TATGCCG 55 1.5937313E-4 23.999895 5 TAGGACG 210 0.0 20.952288 4 CTACTAG 160 1.8189894E-12 20.628147 1 TATATGT 160 1.1023076E-9 17.87492 4 ACCGTTC 100 2.4832769E-5 17.599922 8 GTTATAT 115 4.2670363E-6 17.220018 1 CGCGGCA 115 4.273428E-6 17.217316 26 GCATTCG 640 0.0 16.499926 22 CCGTTCG 80 0.0019884887 16.499926 9 CATATAG 95 3.345601E-4 16.211092 2 ATACCGT 455 0.0 15.955973 6 CGTATTG 650 0.0 15.907621 27 TACGCTA 405 0.0 15.7530155 9 CGCGGTT 520 0.0 15.653777 10 TTCGTAT 675 0.0 15.644376 25 ACGCTAT 410 0.0 15.560905 10 CCTTATA 85 0.002979367 15.529952 2 TAAACGC 425 0.0 15.529343 28 >>END_MODULE