##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062441_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1308350 Sequences flagged as poor quality 0 Sequence length 25 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.237509076317497 32.0 32.0 32.0 32.0 32.0 2 31.0345083502121 32.0 32.0 32.0 32.0 32.0 3 31.005295983490655 32.0 32.0 32.0 32.0 32.0 4 31.04668934153705 32.0 32.0 32.0 32.0 32.0 5 30.985699545228723 32.0 32.0 32.0 32.0 32.0 6 34.625427446784116 36.0 36.0 36.0 32.0 36.0 7 34.4996552910154 36.0 36.0 36.0 32.0 36.0 8 34.52282722513089 36.0 36.0 36.0 32.0 36.0 9 34.57782168380021 36.0 36.0 36.0 32.0 36.0 10 34.362033095119806 36.0 36.0 36.0 32.0 36.0 11 34.59774983758169 36.0 36.0 36.0 32.0 36.0 12 34.443082508503075 36.0 36.0 36.0 32.0 36.0 13 34.50024993312187 36.0 36.0 36.0 32.0 36.0 14 34.43956127947415 36.0 36.0 36.0 32.0 36.0 15 34.40721519471089 36.0 36.0 36.0 32.0 36.0 16 34.43870906103107 36.0 36.0 36.0 32.0 36.0 17 34.42780754385294 36.0 36.0 36.0 32.0 36.0 18 34.46949516566668 36.0 36.0 36.0 32.0 36.0 19 34.35429357587802 36.0 36.0 36.0 32.0 36.0 20 34.32930484961975 36.0 36.0 36.0 32.0 36.0 21 34.255997248442696 36.0 36.0 36.0 32.0 36.0 22 34.213325944892425 36.0 36.0 36.0 32.0 36.0 23 34.24608858485879 36.0 36.0 36.0 32.0 36.0 24 34.200022929644206 36.0 36.0 36.0 32.0 36.0 25 33.84517216341193 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 49.0 5 112.0 6 248.0 7 50.0 8 160.0 9 246.0 10 143.0 11 41.0 12 103.0 13 73.0 14 243.0 15 260.0 16 431.0 17 523.0 18 733.0 19 1014.0 20 1408.0 21 2101.0 22 3070.0 23 4460.0 24 6128.0 25 8628.0 26 11885.0 27 15804.0 28 21596.0 29 29458.0 30 38807.0 31 54076.0 32 78343.0 33 116255.0 34 279386.0 35 632514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.031048560624534 20.891334241932487 12.720897755077237 25.356719442365744 2 10.480241534816173 20.92631659405335 49.91095314530307 18.682488725827408 3 19.004865908524586 27.232730458019116 30.335568828222577 23.426834805233717 4 10.331392211151694 17.828460652908092 40.384336076588966 31.45581105935125 5 9.380325820764174 41.76231002900075 37.305689974057586 11.551674176177482 6 28.24676143962525 39.6764077730037 19.99125219746482 12.085578589906229 7 25.690160881386788 32.77911410073538 23.386348600557557 18.144376417320277 8 21.49364274693306 45.299855344858315 20.373731972611147 12.83276993559748 9 26.963168335617 15.325271266589091 22.11039783216243 35.60116256563148 10 15.42315776908344 29.83640853255875 36.47395690257435 18.26647679578346 11 32.07862348450762 20.261302871974753 30.7699665451518 16.890107098365824 12 26.646748517809627 23.80366745977021 35.0234678548169 14.526116167603265 13 31.029619613667858 24.514176964699345 26.48279809581092 17.973405325821872 14 17.848711612968888 27.375345216404483 27.82867012195542 26.94727304867121 15 18.541501837163498 42.5955654040918 22.918633780853405 15.944298977891295 16 16.31534689336605 28.32280866060819 37.913995327978796 17.447849118046964 17 16.823923916570248 33.53535724561822 33.04835717827692 16.59236165953461 18 17.235172572128263 26.581923930511977 41.58161781587204 14.601285681487717 19 23.662297131933215 26.214223780687057 28.47916773488003 21.644311352499695 20 23.388648186210517 29.547023236523412 32.21953716726532 14.844791410000749 21 19.219484421370662 27.69325780615064 27.224069927436968 25.86318784504173 22 21.786200878710407 35.60652450132419 27.587679684031656 15.019594935933744 23 16.278745825938078 34.540453289922326 32.1497098151588 17.031091068980796 24 22.93387496833532 28.23869389229494 33.32654758961965 15.500883549750089 25 19.193946833521085 31.649177156291326 33.028006685605135 16.128869324582457 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 231.0 1 231.0 2 599.0 3 967.0 4 967.0 5 967.0 6 2778.5 7 4590.0 8 4590.0 9 4590.0 10 4697.5 11 4805.0 12 4805.0 13 4805.0 14 5417.0 15 6029.0 16 6029.0 17 6029.0 18 10821.5 19 15614.0 20 15614.0 21 15614.0 22 30193.0 23 44772.0 24 44772.0 25 44772.0 26 74640.0 27 104508.0 28 104508.0 29 104508.0 30 144035.5 31 183563.0 32 183563.0 33 183563.0 34 190846.5 35 198130.0 36 198130.0 37 198130.0 38 192646.5 39 187163.0 40 187163.0 41 187163.0 42 180704.5 43 174246.0 44 174246.0 45 174246.0 46 179718.5 47 185191.0 48 185191.0 49 185191.0 50 149655.5 51 114120.0 52 114120.0 53 114120.0 54 78563.0 55 43006.0 56 43006.0 57 43006.0 58 31578.5 59 20151.0 60 20151.0 61 20151.0 62 15130.0 63 10109.0 64 10109.0 65 10109.0 66 7752.5 67 5396.0 68 5396.0 69 5396.0 70 4040.0 71 2684.0 72 2684.0 73 2684.0 74 2077.0 75 1470.0 76 1470.0 77 1470.0 78 1077.5 79 685.0 80 685.0 81 685.0 82 482.5 83 280.0 84 280.0 85 280.0 86 201.5 87 123.0 88 123.0 89 123.0 90 90.5 91 58.0 92 58.0 93 58.0 94 48.5 95 39.0 96 39.0 97 39.0 98 229.5 99 420.0 100 420.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008331104062368633 2 0.003821607368059006 3 0.004891657431115527 4 0.013146329346122981 5 0.03462376275461459 6 0.04532426338517981 7 0.0661138074674208 8 0.08430465853938165 9 0.09485229487522452 10 0.11441892459968662 11 0.11571827110482669 12 0.1275652539458096 13 0.11824053196774563 14 0.11931058203080215 15 0.11036802078954408 16 0.10861008140023694 17 0.12030419994649749 18 0.1261130431459472 19 0.12618947529330837 20 0.11678832116788322 21 0.1241258073145565 22 0.1444567585126304 23 0.13520846868192762 24 0.12909389689303322 25 0.12703022891428134 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1308350.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.148865633737046 #Duplication Level Percentage of deduplicated Percentage of total 1 79.79364704689321 31.23830766664661 2 11.922287777101296 9.334880844649685 3 3.2404417496971822 3.8057885595854026 4 1.34905962111807 2.1125661535620615 5 0.7260471896864417 1.421196193639345 6 0.4854024518008947 1.140177321830385 7 0.3413381077869068 0.9354099802196569 8 0.25038670464849394 0.7841884365406474 9 0.1931518109097782 0.6805506862997902 >10 1.3549049661156731 10.408691569762649 >50 0.16833728623406624 4.589270483053832 >100 0.14105561913989048 11.299552755560672 >500 0.01746029207663952 4.717958601582278 >1k 0.014517546221026119 10.779363000082578 >5k 0.001177098342245361 2.7728346447593966 >10k+ 7.84732228163574E-4 3.9792631022249974 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTCCTAAAGTGTGTATTTCTCATTT 14249 1.0890816677494555 No Hit GTCCTACAGTGGACATTTCTAAATT 13622 1.0411587113539955 No Hit CTGTAGGACGTGGAATATGGCAAGA 12697 0.970458975044904 No Hit CTTTAGGACGTGAAATATGGCGAGG 11243 0.859326632781748 No Hit GTCCTACAGTGTGCATTTCTCATTT 8021 0.6130622539840257 No Hit CTGAAGGACCTGGAATATGGCGAGA 6053 0.4626437879772232 No Hit CTGTAGGACCTGGAATATGGCGAGA 5756 0.43994344021095266 No Hit GTACATGGAAGCAGTGGTATCAACG 5643 0.43130660755913935 No Hit GTCCTTCAGTGTGCATTTCTCATTT 5609 0.42870791454885926 No Hit ATTTAGAAATGTCCACTGTAGGACG 5021 0.38376581190048537 No Hit TCCATGTACTCTGCGTTGATACCAC 4518 0.34532044177781174 No Hit GTATCAACGCAGAGTACTTTTTTTT 4376 0.3344670768525242 No Hit TTTCTAAATTTTCCACCTTTTTCAG 3967 0.30320632858180147 No Hit GAATATGGCAAGAAAACTGAAAATC 3725 0.2847097489203959 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 3199 0.24450643940841518 No Hit GGAATATGGCGAGAAAACTGAAAAT 3185 0.24343638934535863 No Hit TATCAACGCAGAGTACTTTTTTTTT 3053 0.23334734589368286 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2905 0.22203538808422824 No Hit CTGTAGGACATGGAATATGGCAAGA 2895 0.22127106661061643 No Hit CCATATTCCAGGTCCTTCAGTGTGC 2792 0.21339855543241487 No Hit TTCCAGGTCCTTCAGTGTGCATTTC 2690 0.20560247640157447 No Hit ACCTGGAATATGGCGAGAAAACTGA 2662 0.20346237627546143 No Hit GCCATATTCCACGTCCTACAGTGGA 2618 0.2000993617915695 No Hit GAAATATGGCGAGGAAAACTGAAAA 2559 0.1955898650972599 No Hit GACCTGGAATATGGCGAGAAAACTG 2553 0.19513127221309284 No Hit GATATACACTGTTCTACAAATCCCG 2540 0.1941376542973975 No Hit GAGTACATGGAAGCAGTGGTATCAA 2507 0.19161539343447853 No Hit CCATATTTCACGTCCTAAAGTGTGT 2429 0.1856536859403065 No Hit ACAGTGGACATTTCTAAATTTTCCA 2417 0.18473650017197232 No Hit GTCCACTGTAGGACGTGGAATATGG 2353 0.1798448427408568 No Hit ATACACACTTTAGGACGTGAAATAT 2332 0.17823976764627203 No Hit TTGTAGAACAGTGTATATCAATGAG 2281 0.17434172813085183 No Hit CATGTACTCTGCGTTGATACCACTG 2203 0.16838002063667978 No Hit CCTAAAGTGTGTATTTCTCATTTTC 2145 0.16394695608973134 No Hit CCACTGTAGGACGTGGAATATGGCA 2116 0.16173042381625713 No Hit CACTTTAGGACGTGAAATATGGCGA 2068 0.15806168074292046 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2024 0.15469866625902856 No Hit GTGTATTTCTCATTTTCCGTGATTT 2012 0.15378148049069437 No Hit GAAATACACACTTTAGGACGTGAAA 1941 0.1483547980280506 No Hit CTACAGTGGACATTTCTAAATTTTC 1937 0.14804906943860588 No Hit ATTCCACGTCCTACAGTGGACATTT 1924 0.14705545152291052 No Hit AGTGTGTATTTCTCATTTTCCGTGA 1912 0.14613826575457636 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1883 0.14392173348110215 No Hit GTGTATATCAATGAGTTACAATGAG 1820 0.1391065081973478 No Hit GTAGGACGTGGAATATGGCAAGAAA 1703 0.13016394695608974 No Hit GTTCTACAGTGTGGTTTTTATCATT 1609 0.12297932510413881 No Hit GTGTATATCAATGAGTTACAATGAA 1590 0.12152711430427637 No Hit TCCTAAAGTGTGTATTTCTCATTTT 1587 0.12129781786219285 No Hit CCCATGTACTCTGCGTTGATACCAC 1534 0.1172469140520503 No Hit ATATTTCACGTCCTAAAGTGTGTAT 1513 0.1156418389574655 No Hit TTTTTCAAGTCGTCAAGTGGATGTT 1500 0.11464822104177017 No Hit GTCCTACAGTGGACATTTCTAAATA 1496 0.11434249245232544 No Hit GTACATGGGAAGCAGTGGTATCAAC 1487 0.11365460312607484 No Hit GGTATCAACGCAGAGTACTTTTTTT 1465 0.11197309588412888 No Hit GGTCCTTCAGTGTGCATTTCTCATT 1449 0.11075018152634998 No Hit ACGTGGAATATGGCAAGAAAACTGA 1444 0.11036802078954408 No Hit ACGTCCTACAGTGGACATTTCTAAA 1428 0.10914510643176518 No Hit GTATCAACGCAGAGTACATGGGAAA 1393 0.1064699812741239 No Hit GCTTCCATGTACTCTGCGTTGATAC 1376 0.10517063476898385 No Hit GCGTTGATACCACTGCTTCCATGTA 1350 0.10318339893759315 No Hit CCTTCAGTGTGCATTTCTCATTTTT 1322 0.10104329881148011 No Hit GTTCTACAAATCCCGTTTCCAACGA 1313 0.10035540948522949 No Hit CACTGAAGGACCTGGAATATGGCGA 1310 0.10012611304314595 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 7.643214736118012E-5 0.0 8 0.0 0.0 0.0 7.643214736118012E-5 0.0 9 0.0 0.0 0.0 7.643214736118012E-5 0.0 10 0.0 0.0 0.0 7.643214736118012E-5 0.0 11 0.0 0.0 0.0 1.5286429472236024E-4 0.0 12 0.0 0.0 0.0 1.5286429472236024E-4 0.0 13 0.0 0.0 0.0 1.5286429472236024E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAGGCG 25 0.0060467487 18.991735 3 CGGACCA 45 6.758109E-4 14.778701 17 GTACTAG 65 3.391764E-6 14.606792 1 GTGTCCG 40 0.0052709645 14.253072 9 TCCAACG 320 0.0 13.953996 18 TAGAAAT 1310 0.0 13.920804 4 TAGGACC 1875 0.0 13.879816 4 CTAGGAC 295 0.0 13.8414345 3 CCAACGT 125 7.2759576E-12 13.680854 19 GTCCTAG 320 0.0 13.648222 1 ATAATAC 85 2.7122223E-7 13.405932 3 CCAACGA 200 0.0 13.300831 19 GGCGAAG 80 1.997305E-6 13.063315 19 GTTCTAG 110 2.7685019E-9 12.946931 1 CCACCTT 1220 0.0 12.92753 13 AAATGTC 1400 0.0 12.759404 7 GGCGAGC 60 4.0890966E-4 12.667458 19 CTTATAC 60 4.106292E-4 12.661158 3 CACCTTT 1280 0.0 12.618941 14 CTAGAGT 320 0.0 12.466188 4 >>END_MODULE