##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062439_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2067123 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15492159876311 32.0 32.0 32.0 32.0 32.0 2 30.70977827637736 32.0 32.0 32.0 32.0 32.0 3 30.695085391628847 32.0 32.0 32.0 32.0 32.0 4 30.78726519902299 32.0 32.0 32.0 32.0 32.0 5 30.53756597938294 32.0 32.0 32.0 32.0 32.0 6 34.214202541406586 36.0 36.0 36.0 32.0 36.0 7 34.09631260452329 36.0 36.0 36.0 32.0 36.0 8 34.08475112511447 36.0 36.0 36.0 32.0 36.0 9 34.279722106521966 36.0 36.0 36.0 32.0 36.0 10 33.86911422300463 36.0 36.0 36.0 32.0 36.0 11 34.249380902829685 36.0 36.0 36.0 32.0 36.0 12 33.98492494157338 36.0 36.0 36.0 32.0 36.0 13 34.12850759243644 36.0 36.0 36.0 32.0 36.0 14 34.02043129508984 36.0 36.0 36.0 32.0 36.0 15 33.943887712535734 36.0 36.0 36.0 32.0 36.0 16 33.951257375589165 36.0 36.0 36.0 32.0 36.0 17 33.869677324474644 36.0 36.0 36.0 32.0 36.0 18 33.8833688174337 36.0 36.0 36.0 32.0 36.0 19 33.86788401077246 36.0 36.0 36.0 32.0 36.0 20 33.87237237455149 36.0 36.0 36.0 32.0 36.0 21 33.85484221306618 36.0 36.0 36.0 32.0 36.0 22 33.797210906172495 36.0 36.0 36.0 32.0 36.0 23 33.764360901600924 36.0 36.0 36.0 32.0 36.0 24 33.725605588056446 36.0 36.0 36.0 27.0 36.0 25 33.27535178119541 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 16.0 4 96.0 5 222.0 6 374.0 7 97.0 8 308.0 9 389.0 10 227.0 11 77.0 12 176.0 13 130.0 14 294.0 15 367.0 16 634.0 17 849.0 18 1301.0 19 1919.0 20 3021.0 21 4463.0 22 6887.0 23 10447.0 24 14658.0 25 20591.0 26 28252.0 27 36402.0 28 48279.0 29 62820.0 30 79508.0 31 105893.0 32 150187.0 33 210924.0 34 456890.0 35 820425.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.34234692322467 17.361110775136154 10.967157937311589 26.329384364327584 2 17.22232166614257 19.748046733267216 36.69021068672746 26.33942091386275 3 19.32666024837809 23.354071823551894 28.056371280255053 29.262896647814962 4 12.943818832985448 15.269419357086248 35.35285357208176 36.43390823784654 5 15.038377405242171 36.042287738588406 33.37382399628325 15.545510859886175 6 34.498074870710205 35.021138911811896 16.75890992427744 13.721876293200458 7 30.478830501196484 29.96431609232406 20.687081031178277 18.869772375301178 8 28.10491569585721 32.82300366889228 19.453893349848272 19.618187285402243 9 27.435332220186186 14.08918865519686 18.592204612458207 39.88327451215874 10 16.23352908239479 26.504978329397037 31.279195252423293 25.982297335784878 11 37.78869343289496 20.98030677393308 22.03948913959052 19.191510653581442 12 24.77636885513934 23.540602405261055 28.64590827065848 23.037120468941126 13 29.72540167694372 19.289066927589165 24.99639132561868 25.98914006984844 14 23.461071950335786 19.747445292246166 24.722634497564457 32.068848259853596 15 25.324292881200943 27.42751057566285 21.68531554561896 25.56288099751725 16 25.846273664204773 25.56167598777334 23.781245323100215 24.81080502492167 17 24.30454000508616 25.73510783874444 24.97538055390726 24.98497160226213 18 25.00496537799364 24.725790027970824 26.01833847310509 24.25090612093045 19 25.80565306318204 24.647010550201383 24.938790616918887 24.6085457696977 20 25.85421357131509 24.38952913868534 24.58701304740389 25.169244242595685 21 26.978573746905717 24.014794432952733 24.045749385987435 24.960882434154115 22 26.22289086574801 24.425111925111924 24.53083512607322 24.821162083066845 23 24.749658079616214 24.240326305656232 25.215435276881625 25.794580337845925 24 24.97139291551972 24.94658880501353 24.94038777738698 25.141630502079764 25 24.984922081677993 24.57368851176465 24.995046691892608 25.44634271466475 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 168.0 1 168.0 2 535.0 3 902.0 4 902.0 5 902.0 6 1799.0 7 2696.0 8 2696.0 9 2696.0 10 3109.0 11 3522.0 12 3522.0 13 3522.0 14 4387.5 15 5253.0 16 5253.0 17 5253.0 18 8560.0 19 11867.0 20 11867.0 21 11867.0 22 19651.5 23 27436.0 24 27436.0 25 27436.0 26 41382.0 27 55328.0 28 55328.0 29 55328.0 30 70590.5 31 85853.0 32 85853.0 33 85853.0 34 107311.5 35 128770.0 36 128770.0 37 128770.0 38 147686.0 39 166602.0 40 166602.0 41 166602.0 42 191578.0 43 216554.0 44 216554.0 45 216554.0 46 240369.5 47 264185.0 48 264185.0 49 264185.0 50 269995.5 51 275806.0 52 275806.0 53 275806.0 54 258034.0 55 240262.0 56 240262.0 57 240262.0 58 221315.0 59 202368.0 60 202368.0 61 202368.0 62 179601.0 63 156834.0 64 156834.0 65 156834.0 66 130849.0 67 104864.0 68 104864.0 69 104864.0 70 79858.0 71 54852.0 72 54852.0 73 54852.0 74 42700.0 75 30548.0 76 30548.0 77 30548.0 78 24575.5 79 18603.0 80 18603.0 81 18603.0 82 13191.5 83 7780.0 84 7780.0 85 7780.0 86 5753.5 87 3727.0 88 3727.0 89 3727.0 90 2506.5 91 1286.0 92 1286.0 93 1286.0 94 763.0 95 240.0 96 240.0 97 240.0 98 528.5 99 817.0 100 817.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008223990541443349 2 0.0035314782913256734 3 0.005466534889312344 4 0.016689863157635033 5 0.03884626120458241 6 0.04973095456825742 7 0.0718873526152048 8 0.0929794695332595 9 0.10192910629894786 10 0.12456926849539189 11 0.1260689373588316 12 0.14019485052413427 13 0.1283426288614659 14 0.13056794394915058 15 0.11982837983032456 16 0.11871572228648222 17 0.1305195675342009 18 0.13685687789260725 19 0.1401464741091846 20 0.1282458760315666 21 0.13705038355240592 22 0.1568847136817693 23 0.14735455993668495 24 0.1426620476865673 25 0.13767927694675158 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2067123.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.54645773317659 #Duplication Level Percentage of deduplicated Percentage of total 1 79.82377209735547 43.54104010811121 2 12.600480718456891 13.746231778540304 3 3.4497671222699324 5.645177295725973 4 1.374882995766687 2.9997998886660318 5 0.7061153115866674 1.9258044499105482 6 0.42659378812250115 1.3961508019835818 7 0.2717172391265042 1.0374849029572506 8 0.19778919659119634 0.8630960041552517 9 0.14897786811180613 0.731359348752545 >10 0.8253739736695189 8.244479759299724 >50 0.08034928650400061 3.059419404693797 >100 0.07815970077715419 9.00379862744513 >500 0.011481502857570708 4.236048521540134 >1k 0.00453919880415586 3.5701091082184973 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2614 0.1264559486784289 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2202 0.1065248657191662 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2101 0.10163884780924985 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.837641494966676E-5 2 0.0 0.0 0.0 0.0 4.837641494966676E-5 3 0.0 0.0 0.0 0.0 4.837641494966676E-5 4 0.0 0.0 0.0 0.0 4.837641494966676E-5 5 0.0 0.0 0.0 0.0 4.837641494966676E-5 6 0.0 0.0 0.0 0.0 4.837641494966676E-5 7 0.0 0.0 0.0 0.0 4.837641494966676E-5 8 0.0 0.0 0.0 0.0 4.837641494966676E-5 9 0.0 0.0 0.0 4.837641494966676E-5 4.837641494966676E-5 10 0.0 0.0 0.0 4.837641494966676E-5 4.837641494966676E-5 11 0.0 0.0 0.0 4.837641494966676E-5 4.837641494966676E-5 12 0.0 0.0 0.0 4.837641494966676E-5 2.4188207474833378E-4 13 0.0 0.0 0.0 4.837641494966676E-5 3.386349046476673E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAATTCG 35 0.0021687883 16.287666 14 CGCCAGT 400 0.0 13.303849 18 CGCATCG 440 0.0 12.524228 13 GTACCGT 85 3.943005E-6 12.294698 6 CAAGACG 475 0.0 12.197917 4 ATCGCCA 440 0.0 12.093237 16 AACGCCG 460 0.0 11.976796 5 GTATCAA 2605 0.0 11.9182005 1 AAGACGG 465 0.0 11.848013 5 AATCGCT 145 9.640644E-11 11.794517 15 GGTATCA 1020 0.0 11.728462 1 AAGACCG 65 8.03362E-4 11.690878 5 CGAACGA 150 1.7644197E-10 11.402195 16 TAACGCC 485 0.0 11.358884 4 CGCAAGA 460 0.0 11.352358 2 GTATTAT 135 4.774847E-9 11.252704 1 GTATAAT 135 4.774847E-9 11.252704 1 ATAACGC 500 0.0 11.205373 3 TCGCCAG 475 0.0 11.2029705 17 GCCGCAT 485 0.0 11.165745 11 >>END_MODULE