##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062438_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1755402 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.305913403311607 32.0 32.0 32.0 32.0 32.0 2 31.42054640475515 32.0 32.0 32.0 32.0 32.0 3 31.505164628956788 32.0 32.0 32.0 32.0 32.0 4 31.609328233646767 32.0 32.0 32.0 32.0 32.0 5 31.54012926953484 32.0 32.0 32.0 32.0 32.0 6 35.13790630294371 36.0 36.0 36.0 36.0 36.0 7 35.154649476302296 36.0 36.0 36.0 36.0 36.0 8 35.094741261545785 36.0 36.0 36.0 36.0 36.0 9 35.232522806741706 36.0 36.0 36.0 36.0 36.0 10 35.10286247822436 36.0 36.0 36.0 36.0 36.0 11 35.23415320251429 36.0 36.0 36.0 36.0 36.0 12 35.1537733237173 36.0 36.0 36.0 36.0 36.0 13 35.190778522526465 36.0 36.0 36.0 36.0 36.0 14 35.156435392007076 36.0 36.0 36.0 36.0 36.0 15 35.11387534023546 36.0 36.0 36.0 36.0 36.0 16 35.13275648540904 36.0 36.0 36.0 36.0 36.0 17 35.103493103004325 36.0 36.0 36.0 36.0 36.0 18 35.116567601039534 36.0 36.0 36.0 36.0 36.0 19 35.10734521209387 36.0 36.0 36.0 36.0 36.0 20 35.09802711857455 36.0 36.0 36.0 36.0 36.0 21 35.09958915393739 36.0 36.0 36.0 36.0 36.0 22 35.080914229333224 36.0 36.0 36.0 36.0 36.0 23 35.04329321716621 36.0 36.0 36.0 36.0 36.0 24 35.021120518263054 36.0 36.0 36.0 36.0 36.0 25 34.99739034135771 36.0 36.0 36.0 36.0 36.0 26 34.95895925833513 36.0 36.0 36.0 32.0 36.0 27 34.938047808991904 36.0 36.0 36.0 32.0 36.0 28 34.932004179099714 36.0 36.0 36.0 32.0 36.0 29 34.90976710747738 36.0 36.0 36.0 32.0 36.0 30 34.90010835124946 36.0 36.0 36.0 32.0 36.0 31 34.89891375308903 36.0 36.0 36.0 32.0 36.0 32 34.865584635314306 36.0 36.0 36.0 32.0 36.0 33 34.85267306292234 36.0 36.0 36.0 32.0 36.0 34 34.83166533933538 36.0 36.0 36.0 32.0 36.0 35 34.816503000452315 36.0 36.0 36.0 32.0 36.0 36 34.7901016405359 36.0 36.0 36.0 32.0 36.0 37 34.79103988715975 36.0 36.0 36.0 32.0 36.0 38 34.757265287381465 36.0 36.0 36.0 32.0 36.0 39 34.751075821948476 36.0 36.0 36.0 32.0 36.0 40 34.74781218205288 36.0 36.0 36.0 32.0 36.0 41 34.71712063675443 36.0 36.0 36.0 32.0 36.0 42 34.698531162662455 36.0 36.0 36.0 32.0 36.0 43 34.69120406607717 36.0 36.0 36.0 32.0 36.0 44 34.65566178003671 36.0 36.0 36.0 32.0 36.0 45 34.626443971238494 36.0 36.0 36.0 32.0 36.0 46 34.61631352818329 36.0 36.0 36.0 32.0 36.0 47 34.6038468681248 36.0 36.0 36.0 32.0 36.0 48 34.564275305599516 36.0 36.0 36.0 32.0 36.0 49 34.5464839392914 36.0 36.0 36.0 32.0 36.0 50 34.046869605936415 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 7.0 21 41.0 22 125.0 23 411.0 24 1020.0 25 2420.0 26 4934.0 27 9159.0 28 15803.0 29 24553.0 30 36064.0 31 52557.0 32 78061.0 33 132506.0 34 300863.0 35 1096876.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.00770776582477 17.72415793171152 11.62380997690747 26.644324325556244 2 16.761302297176197 19.955575279619946 36.23861965477697 27.044502768426888 3 18.792576008750192 23.312255396236733 28.399273096007153 29.49589549900592 4 12.778355677743736 15.320969945277369 35.29985792395799 36.60081645302091 5 14.790173418966141 36.314473835622834 33.15793191531057 15.737420830100458 6 35.25106700057195 34.82506431626512 16.151699795145007 13.77216888801792 7 30.87465485094289 29.956004354560584 20.32452983677234 18.84481095772419 8 28.54098377465675 32.65121037802167 18.963633401351938 19.84417244596964 9 27.57117742830417 13.959708374491997 18.312272630428815 40.15684156677502 10 16.07620362743121 26.50036857654258 31.27551409876484 26.147913697261366 11 38.179459747681726 20.872597843684808 21.639487707089316 19.308454701544147 12 24.903412437720817 23.33260415562931 28.26913721187512 23.49484619477476 13 29.84296474539735 19.0964804643039 25.092884706750933 25.967670083547812 14 23.70556715783621 19.210756282606493 24.641933870418285 32.44174268913901 15 25.46698704912037 27.110770068622458 21.758548754074567 25.663694128182605 16 26.111113010011383 25.44744736533284 23.441923844224853 24.999515780430922 17 24.531588775676454 25.646490091728275 24.71325656459318 25.108664568002087 18 25.30144092350356 24.528113788180715 25.74789136619418 24.422553922121544 19 25.87566836542285 24.623818361833926 25.051697559875173 24.44881571286805 20 26.13623546059535 23.896121800020737 24.68351978635093 25.284122953032977 21 26.910189233007596 23.847073206023463 24.26219179424428 24.98054576672466 22 26.154635804220344 24.02555084248508 24.69833120846393 25.121482144830644 23 24.793010375970862 23.88592470556602 25.360344809906792 25.96072010855633 24 25.121254276798133 24.47188735115945 24.995129320805148 25.411729051237263 25 25.08183310717431 24.21758662688091 25.171214342925442 25.52936592301934 26 24.83414055583849 24.869460100877177 25.399652045514358 24.89674729776997 27 25.517345884304564 24.451094393193127 24.733650753502616 25.297908968999693 28 24.967158519814834 24.376182777506237 25.3123216220558 25.34433708062313 29 24.891677234046675 24.46305746489978 25.292497103227635 25.35276819782591 30 24.81442997102658 24.701806195959673 25.449555144633536 25.03420868838021 31 25.498945540679568 24.38051227012388 24.554318611919093 25.56622357727746 32 25.174347528372422 24.473254559354494 24.60182909669694 25.75056881557615 33 24.81705045340042 24.21069361889755 25.133046447480407 25.839209480221626 34 25.47325342001433 24.363479134693932 25.171157375917314 24.992110069374423 35 25.87105403776457 24.200724392475344 25.112025621481575 24.816195948278512 36 24.764697772931786 24.76731825530562 24.918052958809437 25.54993101295316 37 25.737979106780102 24.482141412622294 24.68186774311525 25.098011737482356 38 24.964993773506013 24.26355900243933 25.135154226781104 25.636292997273557 39 25.54394947709983 24.3297546658828 24.625698273102113 25.50059758391525 40 25.692804269335458 24.297340438258587 25.113563730701 24.896291561704952 41 24.784237456719318 24.693090243716252 25.4939324439644 25.02873985560003 42 25.853280331228973 24.723339725031646 24.924262362695266 24.499117581044114 43 24.936909038499444 23.890596000232424 25.382049240003145 25.790445721264987 44 24.701350459894655 24.521619549254243 24.986242467537352 25.790787523313746 45 24.789877190523878 24.662043224287086 25.046570529143754 25.50150905604528 46 24.714053451126183 24.290274912014258 25.27700270821774 25.718668928641826 47 24.888900029110157 24.24067207435794 25.49673835209163 25.373689544440275 48 25.47131654173802 24.708756170951155 24.732568380348205 25.08735890696262 49 24.669406021757993 24.80681052363534 24.959710060550265 25.564073394056404 50 24.54407853248346 25.034678685952667 24.898413524886905 25.522829256676964 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 38.0 2 46.0 3 127.0 4 208.0 5 240.0 6 272.0 7 259.0 8 246.0 9 321.5 10 397.0 11 607.0 12 817.0 13 1429.0 14 2041.0 15 2672.0 16 3303.0 17 3615.0 18 3927.0 19 4118.5 20 4310.0 21 4948.0 22 5586.0 23 6220.5 24 6855.0 25 8218.5 26 9582.0 27 11912.5 28 14243.0 29 16641.0 30 19039.0 31 21997.0 32 24955.0 33 29594.0 34 34233.0 35 39712.5 36 45192.0 37 53125.0 38 61058.0 39 67003.0 40 72948.0 41 80544.0 42 88140.0 43 91566.0 44 94992.0 45 103929.0 46 112866.0 47 119967.0 48 127068.0 49 131215.5 50 135363.0 51 132386.5 52 129410.0 53 128034.5 54 126659.0 55 127002.5 56 127346.0 57 123890.5 58 120435.0 59 111264.0 60 102093.0 61 90129.5 62 78166.0 63 68738.0 64 59310.0 65 50920.0 66 42530.0 67 37484.0 68 32438.0 69 29259.5 70 26081.0 71 20412.5 72 14744.0 73 13014.5 74 11285.0 75 8463.0 76 5641.0 77 4980.5 78 4320.0 79 3668.0 80 3016.0 81 2366.0 82 1716.0 83 1465.0 84 1214.0 85 990.0 86 766.0 87 551.5 88 337.0 89 228.5 90 120.0 91 74.0 92 28.0 93 22.0 94 16.0 95 9.5 96 3.0 97 5.5 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01646346534867797 2 0.004158591593264677 3 6.836040975229606E-4 4 2.2786803250765355E-4 5 0.0 6 7.975381137767873E-4 7 5.6967008126913386E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.2786803250765355E-4 47 5.6967008126913386E-5 48 0.0 49 5.6967008126913386E-5 50 5.6967008126913386E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1755402.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.53698610722473 #Duplication Level Percentage of deduplicated Percentage of total 1 79.55958783449353 45.77618899929779 2 12.54419058756398 14.435098391260956 3 3.4777200588718102 6.002925921363723 4 1.4318825258153183 3.2954481998005525 5 0.7614576695111949 2.190598967595267 6 0.4779010809375903 1.649819271272029 7 0.3039419096061653 1.2241531001289303 8 0.2212454261278031 1.0183836007521936 9 0.17776429973830396 0.9205219839962994 >10 0.9107850826184372 9.237773168703166 >50 0.0643502217833443 2.5729619767147374 >100 0.060116652872515934 7.36457396832888 >500 0.0071657011464867585 2.8467103220163255 >1k 0.0018909489136562276 1.4648421287691273 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1772 0.1009455384008905 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1393401625382676E-4 2 0.0 0.0 0.0 0.0 1.1393401625382676E-4 3 0.0 0.0 0.0 0.0 1.1393401625382676E-4 4 0.0 0.0 0.0 0.0 1.1393401625382676E-4 5 0.0 5.696700812691338E-5 0.0 0.0 1.1393401625382676E-4 6 5.696700812691338E-5 5.696700812691338E-5 0.0 0.0 1.1393401625382676E-4 7 5.696700812691338E-5 1.7090102438074013E-4 0.0 5.696700812691338E-5 1.1393401625382676E-4 8 5.696700812691338E-5 1.7090102438074013E-4 0.0 5.696700812691338E-5 1.1393401625382676E-4 9 5.696700812691338E-5 1.7090102438074013E-4 0.0 1.1393401625382676E-4 1.1393401625382676E-4 10 5.696700812691338E-5 1.7090102438074013E-4 0.0 1.1393401625382676E-4 1.1393401625382676E-4 11 5.696700812691338E-5 1.7090102438074013E-4 0.0 1.7090102438074013E-4 1.1393401625382676E-4 12 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 13 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 14 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 15 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 16 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 17 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 18 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 19 5.696700812691338E-5 1.7090102438074013E-4 0.0 2.2786803250765352E-4 2.2786803250765352E-4 20 5.696700812691338E-5 1.7090102438074013E-4 0.0 3.4180204876148025E-4 2.2786803250765352E-4 21 5.696700812691338E-5 1.7090102438074013E-4 0.0 3.4180204876148025E-4 2.2786803250765352E-4 22 5.696700812691338E-5 1.7090102438074013E-4 0.0 5.696700812691338E-4 2.2786803250765352E-4 23 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.0014811422112997478 2.2786803250765352E-4 24 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.0022217133169496217 2.2786803250765352E-4 25 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.002677449381964929 2.2786803250765352E-4 26 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.003019251430726409 3.4180204876148025E-4 27 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.0042725256095185035 3.9876905688839367E-4 28 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.008146282162148613 3.9876905688839367E-4 29 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.016406498340551055 3.9876905688839367E-4 30 5.696700812691338E-5 1.7090102438074013E-4 0.0 0.03178759053481767 3.9876905688839367E-4 31 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.07109482614238789 4.5573606501530704E-4 32 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.11695326768455316 4.5573606501530704E-4 33 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.1694768491775673 4.5573606501530704E-4 34 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.22336763886562735 4.5573606501530704E-4 35 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.2856895457564706 4.5573606501530704E-4 36 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.3819637894909542 4.5573606501530704E-4 37 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.5141272483453933 4.5573606501530704E-4 38 1.1393401625382676E-4 1.7090102438074013E-4 0.0 0.6913516106282208 4.5573606501530704E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2605 0.0 22.2998 1 ACTCCGT 135 2.5993359E-9 19.55591 6 TACCGTC 445 0.0 18.291945 7 ATACCGT 440 0.0 17.500317 6 GGTATCA 1305 0.0 17.030039 1 ATACGAA 595 0.0 17.008228 40 GGCGTTA 445 0.0 16.808815 42 ACCGTCG 465 0.0 16.558968 8 GTATTCG 80 0.0019863213 16.50312 1 AACGCAG 3520 0.0 16.437798 6 TACGAAT 630 0.0 16.412529 41 CGTCGTA 475 0.0 16.21036 10 CTAGCGG 625 0.0 16.191832 29 GTAATAC 150 1.8379978E-7 16.134085 3 TCGTTTA 520 0.0 16.076757 30 CGCAATA 605 0.0 15.999835 36 GTTATAT 195 8.894858E-10 15.797858 1 CGAATGC 655 0.0 15.786095 43 TCTAGCG 640 0.0 15.46859 28 GTATAGA 200 1.2732926E-9 15.402911 1 >>END_MODULE