SRR4062437_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062437_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	547813
Sequences flagged as poor quality	0
Sequence length	25
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTACATGGAAGCAGTGGTATCAACG	7832	1.4296849472356443	No Hit
TCCATGTACTCTGCGTTGATACCAC	6382	1.164996084430271	No Hit
GAGTACATGGAAGCAGTGGTATCAA	3200	0.5841409386049619	No Hit
CATGTACTCTGCGTTGATACCACTG	2702	0.4932340050345647	No Hit
GCTTCCATGTACTCTGCGTTGATAC	2267	0.4138273461929527	No Hit
CCCATGTACTCTGCGTTGATACCAC	2067	0.3773185375301426	No Hit
CATGGAAGCAGTGGTATCAACGCAG	1734	0.3165313711065637	No Hit
GTACATGGGAAGCAGTGGTATCAAC	1731	0.3159837389766216	No Hit
GCGTTGATACCACTGCTTCCATGTA	1639	0.29918968699172893	No Hit
GTATCAACGCAGAGTACATGGAAGC	1424	0.25994271767920807	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1243	0.22690224583936489	No Hit
ACGCAGAGTACATGGAAGCAGTGGT	1131	0.20645731298819123	No Hit
ACTCTGCGTTGATACCACTGCTTCC	1101	0.20098099168876973	No Hit
CAGTGGTATCAACGCAGAGTACATG	1090	0.19897300721231514	No Hit
GTATCAACGCAGAGTACTTTTTTTT	1074	0.19605230251929034	No Hit
TATCAACGCAGAGTACATGGAAGCA	991	0.18090114692422413	No Hit
TATCAACGCAGAGTACTTTTTTTTT	870	0.15881331768322404	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	794	0.14493997039135617	No Hit
GTATCAACGCAGAGTACATGGGAAG	721	0.1316142552294305	No Hit
GGTATCAACGCAGAGTACATGGAAG	673	0.12285214115035606	No Hit
ATACCACTGCTTCCATGTACTCTGC	666	0.1215743328471577	No Hit
GAGTACATGGGAAGCAGTGGTATCA	580	0.10587554512214935	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	564	0.10295484042912453	No Hit
AAGCAGTGGTATCAACGCAGAGTAC	552	0.10076431190935593	No Hit
AAAAAGTACTCTGCGTTGATACCAC	552	0.10076431190935593	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCAAGAC	65	1.9168874E-7	16.069345	3
AAGACGG	55	1.1257971E-5	15.545229	5
CGCAAGA	50	8.746176E-5	15.190058	2
CGCGGTC	40	0.005267426	14.252399	10
CGGTCCT	40	0.005270623	14.251097	12
GGGTATA	40	0.0052994723	14.239378	1
AGAACCG	55	1.9567384E-4	13.817982	5
AACCGCG	50	0.001496512	13.3010235	7
AACATAT	50	0.001496512	13.3010235	7
TAAACTG	50	0.0014975436	13.2998085	5
TCTATAC	50	0.0015027117	13.293731	3
AGCGTGT	65	5.4359632E-5	13.154859	6
CTAGGCT	65	5.44063E-5	13.153657	4
CGAACCT	60	4.078693E-4	12.6688	16
GCCGGTC	75	1.4732706E-5	12.667643	8
GCGTGTG	60	4.0818416E-4	12.667642	7
GCGCAAG	60	4.110274E-4	12.657226	1
TAATCAT	100	1.4360376E-7	12.349822	5
TTAAACA	85	3.930765E-6	12.293941	4
GTGTAAT	70	1.0960136E-4	12.205182	1