##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062437_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 547813 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19987842566715 32.0 32.0 32.0 32.0 32.0 2 31.37261437753394 32.0 32.0 32.0 32.0 32.0 3 31.49270827818982 32.0 32.0 32.0 32.0 32.0 4 31.611069835874652 32.0 32.0 32.0 32.0 32.0 5 31.537878801707883 32.0 32.0 32.0 32.0 32.0 6 35.129177292251185 36.0 36.0 36.0 36.0 36.0 7 35.149804769145675 36.0 36.0 36.0 36.0 36.0 8 35.095912291238065 36.0 36.0 36.0 36.0 36.0 9 35.211992048381475 36.0 36.0 36.0 36.0 36.0 10 35.10057629154474 36.0 36.0 36.0 36.0 36.0 11 35.22588730095854 36.0 36.0 36.0 36.0 36.0 12 35.14592570822525 36.0 36.0 36.0 36.0 36.0 13 35.17853172524201 36.0 36.0 36.0 36.0 36.0 14 35.14686763548875 36.0 36.0 36.0 36.0 36.0 15 35.10866116722312 36.0 36.0 36.0 36.0 36.0 16 35.10940777236028 36.0 36.0 36.0 36.0 36.0 17 35.092673959909675 36.0 36.0 36.0 36.0 36.0 18 35.103058890533816 36.0 36.0 36.0 36.0 36.0 19 35.0820498965888 36.0 36.0 36.0 36.0 36.0 20 35.067566852192265 36.0 36.0 36.0 36.0 36.0 21 35.045144967351995 36.0 36.0 36.0 36.0 36.0 22 35.01775970997402 36.0 36.0 36.0 36.0 36.0 23 34.95921966072364 36.0 36.0 36.0 32.0 36.0 24 34.95698714707391 36.0 36.0 36.0 32.0 36.0 25 34.94167535272073 36.0 36.0 36.0 32.0 36.0 26 34.89035126950255 36.0 36.0 36.0 32.0 36.0 27 34.878233995907365 36.0 36.0 36.0 32.0 36.0 28 34.84222170704237 36.0 36.0 36.0 32.0 36.0 29 34.82244488538972 36.0 36.0 36.0 32.0 36.0 30 34.79591028325359 36.0 36.0 36.0 32.0 36.0 31 34.76783500939189 36.0 36.0 36.0 32.0 36.0 32 34.72923242055227 36.0 36.0 36.0 32.0 36.0 33 34.68138397591879 36.0 36.0 36.0 32.0 36.0 34 34.66082586576076 36.0 36.0 36.0 32.0 36.0 35 34.59255256812087 36.0 36.0 36.0 32.0 36.0 36 34.55791483590203 36.0 36.0 36.0 32.0 36.0 37 34.51154682345983 36.0 36.0 36.0 32.0 36.0 38 34.422949072037355 36.0 36.0 36.0 32.0 36.0 39 34.337544015932444 36.0 36.0 36.0 32.0 36.0 40 34.21888856233788 36.0 36.0 36.0 32.0 36.0 41 34.24031010582078 36.0 36.0 36.0 32.0 36.0 42 34.10500481003554 36.0 36.0 36.0 32.0 36.0 43 34.09397184805764 36.0 36.0 36.0 32.0 36.0 44 34.12168385927315 36.0 36.0 36.0 32.0 36.0 45 33.910000310324875 36.0 36.0 36.0 32.0 36.0 46 34.01943911517251 36.0 36.0 36.0 32.0 36.0 47 33.94118065836334 36.0 36.0 36.0 32.0 36.0 48 33.901084859249416 36.0 36.0 36.0 32.0 36.0 49 33.96053032695463 36.0 36.0 36.0 32.0 36.0 50 33.30872761325489 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 12.0 22 31.0 23 136.0 24 419.0 25 951.0 26 1921.0 27 3575.0 28 6240.0 29 9549.0 30 13948.0 31 21022.0 32 32349.0 33 49446.0 34 97025.0 35 311185.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.60497041376905 16.97999528957261 11.74430047414651 25.670733822511828 2 14.818560532762795 20.99597287992026 37.10682638840715 27.078640198909792 3 18.890673773753676 25.491867618334823 28.23825779010971 27.37920081780179 4 12.124414945273196 16.398326433155898 35.66552028798201 35.81173833358889 5 13.21691891211052 37.83535622557332 34.37632914881538 14.571395713500776 6 34.09716124721848 34.70521767543916 17.63911275969267 13.5585083176497 7 29.231690376095493 30.67451849444975 21.71762992115923 18.37616120829553 8 28.481434358074743 33.17172100698596 20.375018482584387 17.971826152354907 9 27.044995281236478 14.640214817830172 17.883292291347594 40.431497609585755 10 14.520465925416154 28.286294775772024 33.585548353178915 23.60769094563291 11 37.134022011160745 21.302524766663076 21.073797080390573 20.48965614178561 12 22.645501293324546 24.36451854921296 30.38171784897401 22.60826230848848 13 30.82858566700681 20.099559521223483 24.769218693240212 24.3026361185295 14 23.70608218497918 19.068733308629042 25.632286930029043 31.592897576362738 15 25.767917154211382 26.495902798947817 24.489196130796458 23.246983916044346 16 25.91778581377222 25.478219757471983 25.083194447740382 23.52079998101542 17 23.878951393997585 25.69325664049594 27.097750509754242 23.330041455752237 18 25.48716441559437 24.202601982793396 27.87228488553576 22.437948716076473 19 24.14948166618901 28.03146329130561 25.36960605170012 22.44944899080526 20 23.973509208434265 24.110052152833177 28.58566700680707 23.330771631925494 21 25.07187671705491 25.99664484048389 24.072630623953795 24.85884781850741 22 23.49652162325465 26.234134640835467 25.334922683470456 24.934421052439426 23 22.93994483519011 25.424551808737654 25.137227484561336 26.498275871510902 24 22.9255238557683 27.332137061369483 25.221380288529115 24.520958794333104 25 25.291659745205024 24.64983488891282 24.447211000834226 25.611294365047925 26 23.157902422907085 25.198379739071548 25.921619238681814 25.722098599339553 27 25.577888805121457 26.066741753116485 25.3004218592841 23.054947582477965 28 24.352470642354234 24.080845105902927 25.910484052039656 25.656200199703182 29 23.119385629767823 26.384185844439617 27.050106514449272 23.446322011343288 30 25.50505373183915 25.020034208753717 26.34858975599338 23.126322303413758 31 23.15899768716697 25.683764350243603 25.71899535060322 25.438242611986205 32 23.43299629618136 26.03461400149321 25.830712305111415 24.701677397214013 33 23.15078320521784 25.352081823541976 25.953199358175144 25.543935613065045 34 23.041074235186095 26.514157203279222 26.888372492073024 23.55639606946166 35 25.129378090698832 25.562372561439762 25.98350166936528 23.32474767849613 36 24.217205506258523 26.40335296898759 25.750758014139862 23.628683510614024 37 25.415607150615266 25.971271218463233 25.847871445182935 22.765250185738566 38 24.177045816729432 25.96469963290393 24.737821117790197 25.120433432576444 39 23.789687356817016 25.90683317117338 26.199268728562487 24.104210743447123 40 25.302794931847185 25.850244517746017 24.61588169685641 24.23107885355039 41 22.7267333925993 25.902999746263777 26.44789371555622 24.9223731455807 42 26.217705676937204 26.025304255284194 25.170267956401183 22.586722111377423 43 25.043947478427857 24.19949873405706 24.99100970586678 25.7655440816483 44 24.362510564736507 25.214261070839868 27.05740827618184 23.36582008824179 45 25.59340504880315 25.16935523618461 25.576063364688316 23.661176350323924 46 23.920797645907722 25.202989346710186 27.023139325169947 23.853073682212145 47 25.218824671922718 24.48664051419006 27.02016929134577 23.27436552254145 48 23.995597037675264 28.177315981913537 24.563491556425276 23.263595423985922 49 23.110440971645435 25.329081274084402 28.119632064226295 23.440845690043865 50 23.494513638778198 27.55684877868908 24.016041970526437 24.932595612006285 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 12.0 1 12.5 2 13.0 3 60.0 4 107.0 5 103.5 6 100.0 7 110.0 8 120.0 9 153.5 10 187.0 11 278.0 12 369.0 13 598.5 14 828.0 15 1127.0 16 1426.0 17 1605.5 18 1785.0 19 2005.5 20 2226.0 21 2561.0 22 2896.0 23 3332.5 24 3769.0 25 4050.0 26 4331.0 27 5078.0 28 5825.0 29 6678.0 30 7531.0 31 8502.0 32 9473.0 33 10789.5 34 12106.0 35 13785.5 36 15465.0 37 17469.0 38 19473.0 39 21176.0 40 22879.0 41 25326.0 42 27773.0 43 29420.5 44 31068.0 45 38605.0 46 46142.0 47 52392.5 48 58643.0 49 55038.5 50 51434.0 51 45166.0 52 38898.0 53 36346.5 54 33795.0 55 33464.5 56 33134.0 57 31559.5 58 29985.0 59 27442.5 60 24900.0 61 21958.5 62 19017.0 63 16349.0 64 13681.0 65 11537.5 66 9394.0 67 7928.0 68 6462.0 69 5788.5 70 5115.0 71 3905.0 72 2695.0 73 2364.0 74 2033.0 75 1464.5 76 896.0 77 800.5 78 705.0 79 592.5 80 480.0 81 376.0 82 272.0 83 221.5 84 171.0 85 147.5 86 124.0 87 89.0 88 54.0 89 33.5 90 13.0 91 9.0 92 5.0 93 2.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016794051984892654 2 0.004928689169479366 3 5.476321299421518E-4 4 1.825440433140506E-4 5 0.0 6 3.650880866281012E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.825440433140506E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 547813.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.1784221733135 #Duplication Level Percentage of deduplicated Percentage of total 1 81.9704900458557 51.78766225870463 2 12.003231256033585 15.166904234752037 3 2.998824954655822 5.683830870273397 4 1.1254844967514592 2.844253387411319 5 0.5088057897011222 1.6072773492981836 6 0.2916936322421115 1.105724606583562 7 0.19166727111349935 0.8476465039850917 8 0.12623255974064465 0.6380139161049971 9 0.09604297912994442 0.5461059494028929 >10 0.577487799259965 7.015287722330201 >50 0.06312776366891945 2.717906837720293 >100 0.04169906830867941 4.967277980019787 >500 0.002316614906037627 0.9822590503011119 >1k 0.0026061917692923302 3.0444725006632156 >5k 2.895768632547034E-4 1.0453768324493489 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5714 1.043056663496485 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 4912 0.8966563407586164 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2111 0.3853504754359608 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2003 0.36563571875804335 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1752 0.3198171638862166 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1342 0.24497410612745588 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1313 0.23968032887134844 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1099 0.2006159036021416 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1083 0.19769519890911683 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1026 0.18729018844021592 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 813 0.14840830721432316 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 796 0.14530505847798428 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATA 773 0.1411065454817611 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGC 692 0.12632047797332302 No Hit CAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTA 669 0.12212196497709984 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 612 0.11171695450819896 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 1.825440433140506E-4 16 0.0 0.0 0.0 0.0 1.825440433140506E-4 17 0.0 0.0 0.0 0.0 1.825440433140506E-4 18 0.0 0.0 0.0 0.0 1.825440433140506E-4 19 0.0 0.0 0.0 1.825440433140506E-4 1.825440433140506E-4 20 0.0 0.0 0.0 1.825440433140506E-4 3.650880866281012E-4 21 0.0 0.0 0.0 1.825440433140506E-4 3.650880866281012E-4 22 0.0 0.0 0.0 7.301761732562024E-4 3.650880866281012E-4 23 0.0 0.0 0.0 0.0010952642598843036 3.650880866281012E-4 24 0.0 0.0 0.0 0.0023730725630826577 3.650880866281012E-4 25 0.0 0.0 0.0 0.0034683368229669613 3.650880866281012E-4 26 0.0 0.0 0.0 0.0038334249095950627 3.650880866281012E-4 27 0.0 0.0 0.0 0.0045636010828512645 3.650880866281012E-4 28 0.0 0.0 0.0 0.006571585559305822 3.650880866281012E-4 29 0.0 0.0 0.0 0.010405010468900884 3.650880866281012E-4 30 0.0 0.0 0.0 0.01569878772500835 3.650880866281012E-4 31 0.0 0.0 0.0 0.02792923862704974 3.650880866281012E-4 32 0.0 0.0 0.0 0.044540746568628345 3.650880866281012E-4 33 0.0 0.0 0.0 0.06370787111660366 3.650880866281012E-4 34 0.0 0.0 0.0 0.08981166931051289 7.301761732562024E-4 35 0.0 0.0 0.0 0.11792345198087668 7.301761732562024E-4 36 0.0 0.0 0.0 0.1537020844704306 7.301761732562024E-4 37 0.0 0.0 0.0 0.21010819385447224 7.301761732562024E-4 38 1.825440433140506E-4 0.0 0.0 0.2816654588335801 7.301761732562024E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGACGTC 30 0.0057424223 29.333214 42 CTATACT 55 1.5921124E-4 23.9999 4 ACGACGG 115 3.5106495E-10 22.956427 6 GTCTAGG 50 0.0025759826 22.003927 1 CTACGAC 120 5.966285E-10 21.99991 4 GACGGTA 120 5.966285E-10 21.99991 8 CGAATGT 70 3.211318E-5 21.99991 33 AACGAAT 70 3.211318E-5 21.99991 31 CCGTCGT 80 3.609699E-6 21.999908 9 GTCGTAG 80 3.609699E-6 21.999908 11 CGCCGGT 145 1.2732926E-11 21.241291 7 CGACGGT 125 9.931682E-10 21.119911 7 ACGGTAT 125 9.931682E-10 21.119911 9 TGGTATA 230 0.0 21.04339 44 TCCAACG 95 6.8524787E-7 20.842018 28 GCATTCG 85 6.1036026E-6 20.705797 22 CGTCGTA 85 6.1036026E-6 20.705797 10 ATAATAC 75 5.4658132E-5 20.533247 3 ACTATAC 65 4.927568E-4 20.307608 3 CGTGCGC 65 4.927568E-4 20.307608 10 >>END_MODULE