##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062436_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2118357 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.123504678389903 32.0 32.0 32.0 32.0 32.0 2 30.66854925775023 32.0 32.0 32.0 32.0 32.0 3 30.66825705015727 32.0 32.0 32.0 32.0 32.0 4 30.761573710191435 32.0 32.0 32.0 32.0 32.0 5 30.49154604252258 32.0 32.0 32.0 32.0 32.0 6 34.14758607732313 36.0 36.0 36.0 32.0 36.0 7 34.02158937327372 36.0 36.0 36.0 32.0 36.0 8 34.01703253984102 36.0 36.0 36.0 32.0 36.0 9 34.2268706360637 36.0 36.0 36.0 32.0 36.0 10 33.81713705480238 36.0 36.0 36.0 32.0 36.0 11 34.21105460505477 36.0 36.0 36.0 32.0 36.0 12 33.93072225314241 36.0 36.0 36.0 32.0 36.0 13 34.08454099096611 36.0 36.0 36.0 32.0 36.0 14 33.96950561213242 36.0 36.0 36.0 32.0 36.0 15 33.88580914359572 36.0 36.0 36.0 32.0 36.0 16 33.8875317049959 36.0 36.0 36.0 32.0 36.0 17 33.80006769397226 36.0 36.0 36.0 32.0 36.0 18 33.81741746079627 36.0 36.0 36.0 32.0 36.0 19 33.807144404838276 36.0 36.0 36.0 32.0 36.0 20 33.80482232220537 36.0 36.0 36.0 32.0 36.0 21 33.76964505982703 36.0 36.0 36.0 32.0 36.0 22 33.721103666662415 36.0 36.0 36.0 27.0 36.0 23 33.670864259423695 36.0 36.0 36.0 27.0 36.0 24 33.63383839456711 36.0 36.0 36.0 27.0 36.0 25 33.15268247986529 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 12.0 4 102.0 5 202.0 6 353.0 7 101.0 8 324.0 9 370.0 10 238.0 11 83.0 12 158.0 13 105.0 14 334.0 15 450.0 16 714.0 17 973.0 18 1311.0 19 1961.0 20 3229.0 21 4738.0 22 7174.0 23 10813.0 24 15144.0 25 21569.0 26 29356.0 27 37900.0 28 50344.0 29 66350.0 30 84696.0 31 114121.0 32 161616.0 33 228817.0 34 482693.0 35 792006.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.58786733151353 17.30601997373219 11.235200752343284 25.87091194241099 2 16.52977771399383 19.88743602066222 37.3620921302464 26.220694135097546 3 18.887864457861188 23.862539295427496 28.413043036961188 28.836553209750125 4 12.266110302973647 15.303259288426702 36.08545451712645 36.3451758914732 5 14.345558984975614 36.71218308821585 33.73148396504762 15.210773961760918 6 34.27430247912963 35.40543016856873 16.950101919563835 13.37016543273781 7 30.178358096499586 30.568547432804532 20.849998653705075 18.40309581699081 8 28.22202125980755 33.04696189242337 19.5209786806597 19.210038167109385 9 27.28503851731377 14.294098107045198 18.591603069666654 39.82926030597438 10 15.671422413956074 26.64393713112554 31.726039465077676 25.958600989840708 11 37.472085963652795 21.00477770147613 22.202913126556393 19.320223208314687 12 24.4029496943906 23.76734075152828 28.95780836629075 22.87190118779037 13 29.557312159559512 19.342431439273096 25.41462550069122 25.685630900476177 14 23.467195270545552 19.85743197958939 24.941841284605733 31.733531465259325 15 25.225605857174653 27.365382007014283 22.45396789839549 24.955044237415578 16 25.841238515569582 25.697855924597956 24.139078277726504 24.321827282105957 17 23.924528658597108 25.89326817187123 25.626556761840842 24.55564640769082 18 25.05336476923164 24.548171984866904 26.769403694789446 23.62905955111201 19 25.429621324419166 25.48596510467086 25.20150464363504 23.882908927274926 20 25.25314158346772 24.355566562624656 25.61224721289037 24.779044641017258 21 26.551869522431147 24.48581397701158 24.045765084790947 24.91655141576632 22 25.364774828397575 24.95124595252762 24.80908505967968 24.874894159395122 23 23.871053135392316 24.539044976352493 25.398911340167196 26.19099054808799 24 24.39400120157481 25.59406340741469 25.1096992423272 24.9022361486833 25 24.831277976564678 24.6700478821711 25.09890764365833 25.399766497605892 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 225.0 1 225.0 2 641.5 3 1058.0 4 1058.0 5 1058.0 6 2676.0 7 4294.0 8 4294.0 9 4294.0 10 4535.5 11 4777.0 12 4777.0 13 4777.0 14 5478.0 15 6179.0 16 6179.0 17 6179.0 18 10117.5 19 14056.0 20 14056.0 21 14056.0 22 22836.5 23 31617.0 24 31617.0 25 31617.0 26 47562.0 27 63507.0 28 63507.0 29 63507.0 30 79085.0 31 94663.0 32 94663.0 33 94663.0 34 115516.0 35 136369.0 36 136369.0 37 136369.0 38 153095.0 39 169821.0 40 169821.0 41 169821.0 42 195607.0 43 221393.0 44 221393.0 45 221393.0 46 258505.5 47 295618.0 48 295618.0 49 295618.0 50 288014.5 51 280411.0 52 280411.0 53 280411.0 54 256689.5 55 232968.0 56 232968.0 57 232968.0 58 213703.5 59 194439.0 60 194439.0 61 194439.0 62 173470.0 63 152501.0 64 152501.0 65 152501.0 66 126389.5 67 100278.0 68 100278.0 69 100278.0 70 75783.0 71 51288.0 72 51288.0 73 51288.0 74 40463.0 75 29638.0 76 29638.0 77 29638.0 78 24396.5 79 19155.0 80 19155.0 81 19155.0 82 13514.0 83 7873.0 84 7873.0 85 7873.0 86 5757.5 87 3642.0 88 3642.0 89 3642.0 90 2520.0 91 1398.0 92 1398.0 93 1398.0 94 845.5 95 293.0 96 293.0 97 293.0 98 594.5 99 896.0 100 896.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008261119348627262 2 0.004484607646397657 3 0.005098290798009967 4 0.015011634016362681 5 0.03460228847167876 6 0.04725360267414794 7 0.06778838505502141 8 0.08851199302100637 9 0.09611222282174345 10 0.11617494123983822 11 0.11735510114678498 12 0.12972317697158695 13 0.119526595375567 14 0.12250059834107282 15 0.11272887431155372 16 0.11046296729021596 17 0.12212294717084986 18 0.1288262554423074 19 0.1309033368785337 20 0.12014027852717932 21 0.1266547612135254 22 0.14860573548273495 23 0.13746502596115764 24 0.13217790957803618 25 0.12967597057530908 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2118357.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.4507807116506 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82038387709612 37.400887509602086 2 12.20026993205489 11.57824666337762 3 3.7734174106647282 5.371548062609294 4 1.5983075983762876 3.033637734412726 5 0.8413307405528915 1.996090023797293 6 0.5126946429244754 1.4596656644068375 7 0.3533044740938734 1.17352011872714 8 0.27399436811653116 1.0400997342179834 9 0.20142258819892608 0.860189315670031 >10 1.1884349430114722 10.49151880849297 >50 0.11136737811895465 3.6882013394194937 >100 0.10153558343030389 10.43278388148018 >500 0.01625611664314045 5.374902682582251 >1k 0.007080885163576517 5.485165347779308 >5k 1.9946155390356386E-4 0.6135431134248309 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 7058 0.3331827449292069 No Hit TCCATGTACTCTGCGTTGATACCAC 5907 0.2788481828133785 No Hit GTATCAACGCAGAGTACTTTTTTTT 3750 0.17702398604201275 No Hit GAGTACATGGAAGCAGTGGTATCAA 2840 0.13406616542915098 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2787 0.13156422642642387 No Hit TATCAACGCAGAGTACTTTTTTTTT 2731 0.12892066823486314 No Hit GAATAGGACCGCGGTTCTATTTTGT 2535 0.1196682145644006 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2517 0.11881849943139895 No Hit GAATAACGCCGCCGCATCGCCAGTC 2398 0.11320093827433242 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2348 0.11084061846043892 No Hit CATGTACTCTGCGTTGATACCACTG 2336 0.11027414170510447 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2271 0.10720572594704293 No Hit GTATCTGATCGTCTTCGAACCTCCG 2263 0.10682807477681996 No Hit GTCCTATTCCATTATTCCTAGCTGC 2252 0.1063088044177634 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2247 0.10607277243637404 No Hit CTATTGGAGCTGGAATTACCGCGGC 2228 0.1051758509070945 No Hit GAACTACGACGGTATCTGATCGTCT 2192 0.1034764206410912 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 4.7206396277870065E-5 0.0 10 0.0 0.0 0.0 4.7206396277870065E-5 0.0 11 0.0 0.0 0.0 9.441279255574013E-5 0.0 12 0.0 0.0 0.0 1.8882558511148026E-4 0.0 13 0.0 0.0 0.0 1.8882558511148026E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGTAT 420 0.0 12.894911 9 CGTCTTA 180 0.0 12.667485 15 CGCATCG 410 0.0 12.513301 13 AATCGTA 100 1.4417128E-7 12.35109 13 CCGTCGT 365 0.0 12.234825 9 GCGTAAC 180 0.0 12.140821 11 ATCGCCA 440 0.0 12.092263 16 CGTCGTA 370 0.0 12.069775 10 CGGACAT 245 0.0 12.018345 5 CGCGTAA 190 0.0 12.002195 10 ACGCGCG 95 1.0392414E-6 12.0010605 13 CAAGACG 515 0.0 11.987666 4 CTATACT 135 3.7289283E-10 11.960344 4 CCGCATC 455 0.0 11.903276 12 AGGCCCG 520 0.0 11.877172 10 CGGTCCA 480 0.0 11.8771715 10 CGCCAGT 450 0.0 11.824665 18 GTAATAC 105 2.7392707E-7 11.755996 3 GCGTTAT 130 2.6411726E-9 11.685329 1 CATCGCC 440 0.0 11.659846 15 >>END_MODULE