##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062434_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1568091 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31643635477788 32.0 32.0 32.0 32.0 32.0 2 31.438598907843996 32.0 32.0 32.0 32.0 32.0 3 31.5142577822333 32.0 32.0 32.0 32.0 32.0 4 31.610876537139745 32.0 32.0 32.0 32.0 32.0 5 31.542786738779828 32.0 32.0 32.0 32.0 32.0 6 35.14561591132147 36.0 36.0 36.0 36.0 36.0 7 35.15949712102167 36.0 36.0 36.0 36.0 36.0 8 35.09731514306249 36.0 36.0 36.0 36.0 36.0 9 35.229514103454456 36.0 36.0 36.0 36.0 36.0 10 35.103331375538794 36.0 36.0 36.0 36.0 36.0 11 35.23118556257258 36.0 36.0 36.0 36.0 36.0 12 35.13691616111565 36.0 36.0 36.0 36.0 36.0 13 35.189573819376555 36.0 36.0 36.0 36.0 36.0 14 35.143760789392964 36.0 36.0 36.0 36.0 36.0 15 35.111738413140564 36.0 36.0 36.0 36.0 36.0 16 35.11730059033564 36.0 36.0 36.0 36.0 36.0 17 35.08567806332668 36.0 36.0 36.0 36.0 36.0 18 35.10682096893611 36.0 36.0 36.0 36.0 36.0 19 35.08675899549197 36.0 36.0 36.0 36.0 36.0 20 35.07909489946693 36.0 36.0 36.0 36.0 36.0 21 35.08049532839612 36.0 36.0 36.0 36.0 36.0 22 35.06426667840068 36.0 36.0 36.0 36.0 36.0 23 35.02347440295238 36.0 36.0 36.0 36.0 36.0 24 35.0034915065516 36.0 36.0 36.0 36.0 36.0 25 34.967184940159726 36.0 36.0 36.0 32.0 36.0 26 34.92527155630636 36.0 36.0 36.0 32.0 36.0 27 34.91747800350873 36.0 36.0 36.0 32.0 36.0 28 34.9055992286162 36.0 36.0 36.0 32.0 36.0 29 34.87351244283654 36.0 36.0 36.0 32.0 36.0 30 34.85993733782032 36.0 36.0 36.0 32.0 36.0 31 34.86545997649371 36.0 36.0 36.0 32.0 36.0 32 34.83123683510715 36.0 36.0 36.0 32.0 36.0 33 34.811009692677274 36.0 36.0 36.0 32.0 36.0 34 34.796937167549586 36.0 36.0 36.0 32.0 36.0 35 34.76974550584118 36.0 36.0 36.0 32.0 36.0 36 34.74959170099184 36.0 36.0 36.0 32.0 36.0 37 34.74455117719571 36.0 36.0 36.0 32.0 36.0 38 34.70294644889869 36.0 36.0 36.0 32.0 36.0 39 34.70686395113549 36.0 36.0 36.0 32.0 36.0 40 34.701892938611344 36.0 36.0 36.0 32.0 36.0 41 34.65822327913367 36.0 36.0 36.0 32.0 36.0 42 34.628907378462095 36.0 36.0 36.0 32.0 36.0 43 34.64108779401195 36.0 36.0 36.0 32.0 36.0 44 34.58969281757245 36.0 36.0 36.0 32.0 36.0 45 34.55269687792354 36.0 36.0 36.0 32.0 36.0 46 34.564716588514315 36.0 36.0 36.0 32.0 36.0 47 34.5387499832599 36.0 36.0 36.0 32.0 36.0 48 34.49810055666412 36.0 36.0 36.0 32.0 36.0 49 34.492264798407746 36.0 36.0 36.0 32.0 36.0 50 33.97417751903429 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 13.0 21 32.0 22 131.0 23 343.0 24 921.0 25 2261.0 26 4640.0 27 8822.0 28 14461.0 29 22490.0 30 33309.0 31 48331.0 32 72028.0 33 120925.0 34 273482.0 35 965897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78171172349131 18.239865802204953 11.605047725047598 26.37337474925614 2 16.929726158353546 20.34957395395348 35.72492240228619 26.995777485406787 3 18.402093774731725 23.840857304838984 28.469010131517773 29.288038788911514 4 12.339134893283777 15.284704135747829 35.80050558515998 36.57565538580842 5 14.89008921681791 36.27731826617095 32.81603734479526 16.01655517221588 6 35.005248450017284 35.302681875055 16.2013848765562 13.490684798371513 7 30.84176874939018 30.251178024744735 20.4589529561741 18.448100269690983 8 28.811146802066972 31.850511226708143 19.303407774166168 20.034934197058714 9 27.77185762816061 13.748245478100444 18.626597563534258 39.85329933020469 10 16.61370417915797 25.75296969372313 30.44549072726009 27.187835399858812 11 38.58162568371351 20.730939722248262 21.580826622944716 19.106607971093513 12 25.1618687946044 23.55698744524393 27.677220263364816 23.60392349678686 13 29.385539487185376 18.651022166443145 25.371741818555172 26.591696527816307 14 23.94994933329762 19.768686893809097 24.12525803668282 32.15610573621046 15 25.743276378730574 26.831287214836387 21.675336444122184 25.750099962310863 16 26.692455986291613 25.198728900299795 22.96939399562908 25.139421117779513 17 24.515860367797533 25.45330596247284 24.52746683706494 25.503366832664685 18 25.857619232557294 23.69530849931541 25.752587062868166 24.694485205259134 19 25.989371790285134 24.600294243127472 24.895557719545614 24.514776247041787 20 26.220735913923367 23.48256574395236 24.303245156052807 25.99345318607147 21 27.838307853306983 23.577394424175637 23.704874270689647 24.87942345182773 22 26.443171984278973 23.685041238040395 24.370715730145765 25.501071047534868 23 24.533716474362777 23.337739965346397 25.289603728355054 26.838939831935775 24 25.139421117779513 24.664703770380672 24.64595485848717 25.549920253352642 25 25.169776498940433 23.9611093999009 24.884907827415628 25.984206273743045 26 25.044146034892105 24.96781117932569 25.204085732269366 24.78395705351284 27 26.104288590394308 23.975394285153094 24.26644882216657 25.653868302286025 28 24.92808134221802 23.872976759639585 25.503239289046363 25.695702609096028 29 24.775347859276025 24.241769132021037 25.364535604119915 25.618347404583027 30 24.647485381907046 24.61343123581476 25.690409548935616 25.048673833342583 31 25.597876653842157 24.37422317964965 24.08788775651413 25.94001240999406 32 25.22187806702545 24.127107419148505 24.136290559667774 26.51472395415827 33 24.661834038968404 23.662529789406356 24.985284655035965 26.690351516589278 34 25.829113233862067 23.939235669358474 25.168437290948038 25.06321380583142 35 26.61510078177861 23.596079564259984 25.13183227248929 24.65698738147212 36 24.84065019185749 24.615663249135412 24.56005423154651 25.983632327460587 37 26.316010996810775 24.27014758709794 24.303755330526098 25.110086085565186 38 25.030562639540687 23.82495658734091 25.217732899429947 25.926747873688456 39 25.86036142035124 23.932284542159863 24.165306732836296 26.0420473046526 40 26.024191198087355 24.125130493064496 25.062958718594775 24.78771959025337 41 24.643977932403157 24.750413081893843 25.52606959672621 25.07953938897679 42 26.472251929256657 24.83707897054444 24.664384911334867 24.02628418886404 43 25.29642731193534 23.312932731582542 25.13540349380234 26.255236462679783 44 24.812781911253875 24.35968320716081 24.68102935352604 26.146505528059276 45 24.910416551080264 24.619617101303433 24.8693475059802 25.600618841636102 46 24.7149874783893 24.196139377292997 25.071854977619257 26.017018166698445 47 24.934330979515856 23.82444641286762 25.591116842071028 25.650105765545494 48 26.22417959161809 24.804300260635383 24.212242784379225 24.759277363367303 49 24.515541508751724 25.080495966114214 24.586710847776054 25.817251677358012 50 24.61931394243953 25.124386993093506 24.55496814596101 25.701330918505956 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 49.0 1 52.0 2 55.0 3 128.0 4 201.0 5 219.5 6 238.0 7 230.5 8 223.0 9 320.0 10 417.0 11 564.0 12 711.0 13 1278.0 14 1845.0 15 2455.0 16 3065.0 17 3535.0 18 4005.0 19 4342.0 20 4679.0 21 5517.5 22 6356.0 23 6579.0 24 6802.0 25 8323.5 26 9845.0 27 12032.0 28 14219.0 29 16168.0 30 18117.0 31 19432.0 32 20747.0 33 23681.5 34 26616.0 35 30926.0 36 35236.0 37 44977.5 38 54719.0 39 59310.5 40 63902.0 41 70891.0 42 77880.0 43 78581.0 44 79282.0 45 88750.5 46 98219.0 47 105164.0 48 112109.0 49 116861.5 50 121614.0 51 114219.0 52 106824.0 53 106422.5 54 106021.0 55 110331.0 56 114641.0 57 112986.0 58 111331.0 59 103121.0 60 94911.0 61 83564.5 62 72218.0 63 63105.0 64 53992.0 65 47049.0 66 40106.0 67 35868.5 68 31631.0 69 29827.5 70 28024.0 71 21473.5 72 14923.0 73 13795.5 74 12668.0 75 8979.5 76 5291.0 77 5001.0 78 4711.0 79 4139.0 80 3567.0 81 2898.5 82 2230.0 83 2005.5 84 1781.0 85 1506.5 86 1232.0 87 919.0 88 606.0 89 383.5 90 161.0 91 99.5 92 38.0 93 26.5 94 15.0 95 11.0 96 7.0 97 6.0 98 5.0 99 5.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016325583145365925 2 0.004336483022987824 3 8.928053282621991E-4 4 4.4640266413109955E-4 5 6.377180916158565E-5 6 5.739462824542708E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.275436183231713E-4 47 0.0 48 0.0 49 0.0 50 6.377180916158565E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1568091.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.75568780684436 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82202625446031 37.64200078110896 2 12.68440447832189 12.115049205649573 3 3.6118330175313225 5.174567099870353 4 1.5081638726306776 2.8809361225164807 5 0.8216262049913046 1.9618662269743525 6 0.5080137823087086 1.4556328553705327 7 0.34263155180663124 1.145382379459647 8 0.24582205208525187 0.9391520940336897 9 0.18923982005938936 0.8133549990641642 >10 1.0287186954860883 8.962085416489433 >50 0.10110487273611167 3.4290292066519594 >100 0.10937335691199505 11.415902026157818 >500 0.019545237316240253 6.433849215797101 >1k 0.007496803354174343 5.6311923708560485 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2848 0.18162211249219593 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2694 0.17180125388131173 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2609 0.16638065010257697 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2539 0.16191662346126595 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2474 0.15777145586576288 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2282 0.14552726850673844 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2272 0.14488955041512258 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2236 0.14259376528530548 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2208 0.1408081546287811 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2201 0.14036175196465 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2201 0.14036175196465 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2049 0.130668436972089 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 1853 0.11816916237641821 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 1813 0.11561829000995479 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1773 0.11306741764349135 No Hit GCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAAT 1735 0.1106440888953511 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC 1726 0.11007014261289683 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 1692 0.10790190110140292 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1670 0.10649892129984803 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 1652 0.10535102873493948 No Hit GAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTTAC 1635 0.10426690797919254 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 1627 0.10375673350589984 No Hit GCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 1576 0.10050437123865898 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.275436183231713E-4 2 0.0 0.0 0.0 0.0 1.275436183231713E-4 3 0.0 0.0 0.0 0.0 1.275436183231713E-4 4 0.0 0.0 0.0 0.0 1.275436183231713E-4 5 0.0 0.0 0.0 0.0 1.275436183231713E-4 6 0.0 0.0 0.0 0.0 2.550872366463426E-4 7 0.0 0.0 0.0 0.0 2.550872366463426E-4 8 0.0 0.0 0.0 0.0 2.550872366463426E-4 9 0.0 0.0 0.0 0.0 2.550872366463426E-4 10 0.0 0.0 0.0 0.0 2.550872366463426E-4 11 0.0 0.0 0.0 0.0 2.550872366463426E-4 12 0.0 0.0 0.0 1.275436183231713E-4 6.377180916158565E-4 13 0.0 0.0 0.0 1.275436183231713E-4 0.0010203489465853703 14 0.0 0.0 0.0 2.550872366463426E-4 0.0010203489465853703 15 0.0 0.0 0.0 3.1885904580792826E-4 0.0010203489465853703 16 0.0 0.0 0.0 3.826308549695139E-4 0.001084120755746956 17 0.0 0.0 0.0 4.4640266413109955E-4 0.001084120755746956 18 0.0 0.0 0.0 5.739462824542708E-4 0.0011478925649085416 19 0.0 0.0 0.0 8.290335191006134E-4 0.0011478925649085416 20 0.0 0.0 0.0 0.001275436183231713 0.001275436183231713 21 0.0 0.0 0.0 0.0014667516107164699 0.001275436183231713 22 0.0 0.0 0.0 0.0020406978931707407 0.0013392079923932986 23 0.0 0.0 0.0 0.0031885904580792822 0.0014667516107164699 24 0.0 0.0 0.0 0.004400254832149409 0.0014667516107164699 25 0.0 0.0 0.0 0.005101744732926852 0.0014667516107164699 26 0.0 0.0 0.0 0.006313409106996979 0.0015305234198780555 27 0.0 0.0 0.0 0.008417878809329305 0.0016580670382012267 28 0.0 0.0 0.0 0.014157341633872014 0.0017218388473628126 29 0.0 0.0 0.0 0.025572495473795843 0.0017218388473628126 30 0.0 0.0 0.0 0.04955069571855205 0.0017218388473628126 31 0.0 0.0 0.0 0.09852744515464983 0.0017218388473628126 32 0.0 0.0 0.0 0.15228708027786653 0.0017218388473628126 33 0.0 0.0 0.0 0.21255143993556497 0.0017218388473628126 34 0.0 0.0 0.0 0.28078727573846163 0.0018493824656859838 35 0.0 0.0 0.0 0.354762574365901 0.0018493824656859838 36 0.0 0.0 0.0 0.4670647302994533 0.0018493824656859838 37 0.0 0.0 0.0 0.6182039180124113 0.0018493824656859838 38 0.0 0.0 0.0 0.8153863519400341 0.0019131542748475694 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 175 0.0 22.628458 4 GTCTACG 55 0.0044793636 20.003725 1 AGGACGT 200 0.0 19.7999 5 GTATCAA 2865 0.0 19.35439 1 TAACGGC 255 0.0 18.117554 36 CGTCGTA 650 0.0 17.93837 10 GTGTACG 75 0.0012894915 17.603277 1 CGCAATA 685 0.0 17.02181 36 AGAGCGA 925 0.0 16.8864 15 TTAACGG 275 0.0 16.799915 35 GTATTAG 590 0.0 16.782787 1 GTCTATT 105 3.769472E-5 16.765028 1 GATCGAA 105 3.775661E-5 16.76182 11 CGTCTTA 225 1.8189894E-12 16.622137 15 GAGCGAA 955 0.0 16.355936 16 TAGGGAG 135 1.0860058E-6 16.296213 5 ACCGTCG 730 0.0 16.27389 8 ATACCGT 710 0.0 16.112595 6 TCTAGTA 110 5.621662E-5 16.000431 2 TACCGTC 715 0.0 15.999919 7 >>END_MODULE