##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062430_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1706612 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17288053757972 32.0 32.0 32.0 32.0 32.0 2 30.860618582313965 32.0 32.0 32.0 32.0 32.0 3 30.847274600202038 32.0 32.0 32.0 32.0 32.0 4 30.913520472140124 32.0 32.0 32.0 32.0 32.0 5 30.739875847585743 32.0 32.0 32.0 32.0 32.0 6 34.39265691322925 36.0 36.0 36.0 32.0 36.0 7 34.271805190635014 36.0 36.0 36.0 32.0 36.0 8 34.26662475126157 36.0 36.0 36.0 32.0 36.0 9 34.40367406299733 36.0 36.0 36.0 32.0 36.0 10 34.09293207829313 36.0 36.0 36.0 32.0 36.0 11 34.400979250116606 36.0 36.0 36.0 32.0 36.0 12 34.187002083660495 36.0 36.0 36.0 32.0 36.0 13 34.306577007544774 36.0 36.0 36.0 32.0 36.0 14 34.214071505415404 36.0 36.0 36.0 32.0 36.0 15 34.16577933355678 36.0 36.0 36.0 32.0 36.0 16 34.165317014060605 36.0 36.0 36.0 32.0 36.0 17 34.08765319826651 36.0 36.0 36.0 32.0 36.0 18 34.104113295816504 36.0 36.0 36.0 32.0 36.0 19 34.08875889774594 36.0 36.0 36.0 32.0 36.0 20 34.08143678820962 36.0 36.0 36.0 32.0 36.0 21 34.057491099324274 36.0 36.0 36.0 32.0 36.0 22 33.99698584095272 36.0 36.0 36.0 32.0 36.0 23 33.97755318725053 36.0 36.0 36.0 32.0 36.0 24 33.954224510316344 36.0 36.0 36.0 32.0 36.0 25 33.523025151586886 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 10.0 4 60.0 5 150.0 6 291.0 7 69.0 8 237.0 9 328.0 10 221.0 11 69.0 12 152.0 13 96.0 14 314.0 15 393.0 16 595.0 17 726.0 18 1065.0 19 1494.0 20 2197.0 21 3353.0 22 4848.0 23 7156.0 24 10225.0 25 14222.0 26 19544.0 27 25203.0 28 34196.0 29 45325.0 30 59188.0 31 80204.0 32 115273.0 33 167457.0 34 380388.0 35 731561.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.923294916819565 17.832708554672188 11.23810483741007 26.005891691098178 2 16.668610153203385 20.327794885016893 37.32074266577989 25.682852295999837 3 18.99901260756571 24.362575189787375 28.490754549476566 28.14765765317035 4 12.519024381095933 15.62287742994896 36.2742863036763 35.583811885278806 5 14.469685202064461 36.74170508465635 33.68633921741602 15.102270495863165 6 33.47475089736743 35.737119267356576 17.30472622306066 13.483403612215335 7 29.656284447780095 30.901329830898046 21.201010859112976 18.24137486220888 8 27.77662110686564 32.949149162651715 20.02433896257371 19.24989076790893 9 27.563926603179965 14.375538147154945 19.04249104358904 39.01804420607605 10 15.899535198055611 26.73147964005568 31.84048781031528 25.52849735157342 11 36.97700150069285 21.296345185169542 22.684808740861204 19.041844573276403 12 24.770304689897397 24.03458734054519 28.80052666073274 22.394581308824677 13 29.426227921294295 19.809659805916834 25.408984427938076 25.3551278448508 14 23.245384505267307 20.287407977583726 25.348494199977 31.118713317171963 15 24.975522820240414 27.686814118331693 22.6416112642544 24.696051797173492 16 25.332146787526955 25.912787709982236 24.435139276386955 24.319926226103853 17 23.58700058727692 26.053446306403664 25.816658130323848 24.54289497599557 18 24.47262978972079 24.732141757018645 27.151417576053788 23.643810877206775 19 25.256715438835105 25.321139997852516 25.821281109933057 23.600863453379326 20 25.407391241088316 24.49334234475249 25.691990162534083 24.407276251625106 21 26.408103419040618 24.471959384334475 24.66012308381939 24.459814112805518 22 25.463513684019023 25.054181497011434 25.07888814227741 24.403416676692128 23 23.91845845379475 24.80156506441984 25.866221964299026 25.413754517486392 24 24.375227004815585 25.533619009786655 25.72062110277839 24.370532882619365 25 24.421704087338306 25.017411217459212 25.814542811059393 24.74634188414309 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 311.0 1 311.0 2 741.0 3 1171.0 4 1171.0 5 1171.0 6 3016.5 7 4862.0 8 4862.0 9 4862.0 10 4979.0 11 5096.0 12 5096.0 13 5096.0 14 5620.0 15 6144.0 16 6144.0 17 6144.0 18 9713.0 19 13282.0 20 13282.0 21 13282.0 22 21229.0 23 29176.0 24 29176.0 25 29176.0 26 43124.5 27 57073.0 28 57073.0 29 57073.0 30 70207.5 31 83342.0 32 83342.0 33 83342.0 34 100823.0 35 118304.0 36 118304.0 37 118304.0 38 129924.5 39 141545.0 40 141545.0 41 141545.0 42 159129.5 43 176714.0 44 176714.0 45 176714.0 46 200637.5 47 224561.0 48 224561.0 49 224561.0 50 222781.0 51 221001.0 52 221001.0 53 221001.0 54 201824.5 55 182648.0 56 182648.0 57 182648.0 58 167107.0 59 151566.0 60 151566.0 61 151566.0 62 134683.5 63 117801.0 64 117801.0 65 117801.0 66 98078.0 67 78355.0 68 78355.0 69 78355.0 70 59812.0 71 41269.0 72 41269.0 73 41269.0 74 32828.5 75 24388.0 76 24388.0 77 24388.0 78 20211.5 79 16035.0 80 16035.0 81 16035.0 82 11373.0 83 6711.0 84 6711.0 85 6711.0 86 4982.5 87 3254.0 88 3254.0 89 3254.0 90 2178.0 91 1102.0 92 1102.0 93 1102.0 94 665.5 95 229.0 96 229.0 97 229.0 98 450.5 99 672.0 100 672.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008261983391655514 2 0.00333995073279691 3 0.005683775808443864 4 0.014590311095902291 5 0.0349815892540308 6 0.04623194961713618 7 0.0663302496408088 8 0.08947552226282247 9 0.09890941819230147 10 0.11807018818571532 11 0.12105856515716518 12 0.13412538995389695 13 0.1221718820680975 14 0.12516025903954736 15 0.11502321558737429 16 0.11390989867644198 17 0.1251016634126562 18 0.13236752114716174 19 0.13435977246146166 20 0.1235195814865945 21 0.1315471823706853 22 0.153344755574202 23 0.14068810016570843 24 0.1378755100749321 25 0.13189875613203236 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1706612.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.089302461464094 #Duplication Level Percentage of deduplicated Percentage of total 1 78.00725631378279 40.63343568317587 2 13.701230727572348 14.273751029256434 3 4.029994707084278 6.29758839646237 4 1.5400440530990596 3.20879281943424 5 0.7346190182383839 1.9132896117481493 6 0.42115108904038095 1.316247987539964 7 0.2789503804722608 1.0171231518112056 8 0.19660360758827206 0.8192755824544401 9 0.13186545390982068 0.6181901561634212 >10 0.7500889809549153 7.30703902631666 >50 0.09065777613811658 3.2918545489027062 >100 0.0993773668247855 10.910257145037997 >500 0.013761391838228209 4.7937130775455845 >1k 0.004399133456482788 3.599441784150907 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4062 0.2380154364319482 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2877 0.1685796185659072 No Hit TATCAACGCAGAGTACTTTTTTTTT 2731 0.16002465703979582 No Hit GTACATGGAAGCAGTGGTATCAACG 2588 0.15164548239435793 No Hit TCCATGTACTCTGCGTTGATACCAC 2280 0.1335980293118764 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2035 0.1192421007235388 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1870 0.1095738222864951 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1846 0.10816752724110694 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1785 0.10459319400074533 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1739 0.10189779516375135 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1719125378234771E-4 2 0.0 0.0 0.0 0.0 1.1719125378234771E-4 3 0.0 0.0 0.0 0.0 1.1719125378234771E-4 4 0.0 0.0 0.0 1.1719125378234771E-4 1.1719125378234771E-4 5 0.0 0.0 0.0 1.1719125378234771E-4 1.1719125378234771E-4 6 0.0 0.0 0.0 1.1719125378234771E-4 1.1719125378234771E-4 7 0.0 0.0 0.0 1.7578688067352156E-4 1.1719125378234771E-4 8 0.0 0.0 0.0 1.7578688067352156E-4 1.7578688067352156E-4 9 0.0 0.0 0.0 2.3438250756469543E-4 1.7578688067352156E-4 10 0.0 0.0 0.0 5.273606420205647E-4 1.7578688067352156E-4 11 0.0 0.0 0.0 5.273606420205647E-4 1.7578688067352156E-4 12 0.0 0.0 0.0 5.273606420205647E-4 5.859562689117386E-4 13 0.0 0.0 0.0 5.273606420205647E-4 5.859562689117386E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCGTA 65 3.365134E-6 14.618501 13 AACCGTC 40 0.005277056 14.250946 7 TTAATCG 40 0.0052791107 14.25011 11 CGCAAGA 410 0.0 12.504586 2 TCGCCAG 270 0.0 12.318163 17 CGCATCG 280 0.0 12.216889 13 AAGACGG 475 0.0 12.198662 5 CGAACGA 125 1.4060788E-9 12.162949 16 CGCCAGT 285 0.0 12.002911 18 GCTCGTA 135 3.7107384E-10 11.963758 9 CGATAAC 135 3.7107384E-10 11.963056 10 GCATCGC 295 0.0 11.917444 14 AAATCGT 80 2.8639342E-5 11.876137 12 GCGCAAG 465 0.0 11.840868 1 CAAGACG 485 0.0 11.7506 4 CGCGTAT 65 8.019647E-4 11.693085 7 ATCGCCA 285 0.0 11.669497 16 CGTCAAT 255 0.0 11.551481 19 CGTTATT 190 0.0 11.493007 2 GTATTAG 390 0.0 11.440413 1 >>END_MODULE