##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062428_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1506065 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.258063894984613 32.0 32.0 32.0 32.0 32.0 2 31.04996397897833 32.0 32.0 32.0 32.0 32.0 3 31.028579111791323 32.0 32.0 32.0 32.0 32.0 4 31.04869112554903 32.0 32.0 32.0 32.0 32.0 5 30.95363015540498 32.0 32.0 32.0 32.0 32.0 6 34.541006530262635 36.0 36.0 36.0 32.0 36.0 7 34.47286737292215 36.0 36.0 36.0 32.0 36.0 8 34.47268278593553 36.0 36.0 36.0 32.0 36.0 9 34.5670884058789 36.0 36.0 36.0 32.0 36.0 10 34.36316028856656 36.0 36.0 36.0 32.0 36.0 11 34.547609166935025 36.0 36.0 36.0 32.0 36.0 12 34.40521690630882 36.0 36.0 36.0 32.0 36.0 13 34.48323877123497 36.0 36.0 36.0 32.0 36.0 14 34.420556217693125 36.0 36.0 36.0 32.0 36.0 15 34.379897945971784 36.0 36.0 36.0 32.0 36.0 16 34.37426737889799 36.0 36.0 36.0 32.0 36.0 17 34.31959775972484 36.0 36.0 36.0 32.0 36.0 18 34.31996826166201 36.0 36.0 36.0 32.0 36.0 19 34.30640111814563 36.0 36.0 36.0 32.0 36.0 20 34.28570944813139 36.0 36.0 36.0 32.0 36.0 21 34.26544538250341 36.0 36.0 36.0 32.0 36.0 22 34.22418355117475 36.0 36.0 36.0 32.0 36.0 23 34.19506528602683 36.0 36.0 36.0 32.0 36.0 24 34.170978012237185 36.0 36.0 36.0 32.0 36.0 25 33.68556602802668 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 9.0 4 60.0 5 121.0 6 264.0 7 58.0 8 241.0 9 287.0 10 167.0 11 56.0 12 126.0 13 110.0 14 236.0 15 338.0 16 524.0 17 756.0 18 1008.0 19 1414.0 20 1845.0 21 2463.0 22 3438.0 23 4788.0 24 6514.0 25 9108.0 26 12877.0 27 17222.0 28 24216.0 29 33551.0 30 45189.0 31 64923.0 32 98094.0 33 149908.0 34 359987.0 35 666167.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.135320167310006 17.63607882614727 11.131268231883325 26.0973327746594 2 17.03675766553831 19.919775621403616 36.984886051104034 26.058580661954046 3 19.50183002300145 23.64136064467806 28.071663063283204 28.785146269037288 4 13.048311584819206 15.343825746256268 35.45545705083508 36.15240561808945 5 14.909765996027977 36.15065790784641 33.407570755813566 15.53200534031205 6 34.15992070925887 34.927119745228005 16.927536925065734 13.985422620447391 7 30.078504200954807 30.12368647488563 20.906236814915466 18.891572509244096 8 28.037838444939332 32.84034895691072 19.706947437817046 19.4148651603329 9 27.40224592447654 14.364292778374468 18.81918819188192 39.41427310526708 10 16.167503849089115 26.60425247897294 31.494722958653202 25.73352071328474 11 37.44075955409038 21.096013896616988 22.29288862031669 19.17033792897595 12 24.857165843205227 23.582113766001314 28.696218194342215 22.864502196451237 13 29.669911793879024 19.616621149790852 25.134489736764426 25.5789773195657 14 23.318015976853772 19.85545574454053 25.066149174032827 31.760379104572866 15 25.070562036760062 27.498321534217435 22.209259813208362 25.221856615814136 16 25.55396902001295 25.66498219136012 24.28855181656104 24.492496972065894 17 23.9893975243605 25.751291237666845 25.478185080612185 24.781126157360468 18 24.691087153813164 24.679584991340136 26.782486129256384 23.846841725590316 19 25.442004818969504 24.901134000329776 25.469264442281403 24.187596738419316 20 25.55453691472381 24.463645713320787 25.365597138114175 24.61622023384123 21 26.29864323188322 24.217848810808405 24.571684255386483 24.911823701921897 22 25.741434550670512 24.765091030966087 24.938255349540555 24.555219068822844 23 24.324631629341987 24.5092159157402 25.60594978456301 25.560202670354805 24 24.690877007047145 24.988281351291512 25.471521855196734 24.849319786464612 25 24.641553766768766 24.723332364844243 25.55095837203411 25.08415549635287 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 139.0 1 139.0 2 448.5 3 758.0 4 758.0 5 758.0 6 1836.0 7 2914.0 8 2914.0 9 2914.0 10 3292.0 11 3670.0 12 3670.0 13 3670.0 14 4218.5 15 4767.0 16 4767.0 17 4767.0 18 7820.5 19 10874.0 20 10874.0 21 10874.0 22 17169.5 23 23465.0 24 23465.0 25 23465.0 26 35081.5 27 46698.0 28 46698.0 29 46698.0 30 58609.0 31 70520.0 32 70520.0 33 70520.0 34 84010.5 35 97501.0 36 97501.0 37 97501.0 38 109734.0 39 121967.0 40 121967.0 41 121967.0 42 138014.0 43 154061.0 44 154061.0 45 154061.0 46 172927.0 47 191793.0 48 191793.0 49 191793.0 50 193375.0 51 194957.0 52 194957.0 53 194957.0 54 181191.5 55 167426.0 56 167426.0 57 167426.0 58 154127.0 59 140828.0 60 140828.0 61 140828.0 62 125536.0 63 110244.0 64 110244.0 65 110244.0 66 92093.0 67 73942.0 68 73942.0 69 73942.0 70 57216.5 71 40491.0 72 40491.0 73 40491.0 74 32067.0 75 23643.0 76 23643.0 77 23643.0 78 19124.0 79 14605.0 80 14605.0 81 14605.0 82 10456.5 83 6308.0 84 6308.0 85 6308.0 86 4547.0 87 2786.0 88 2786.0 89 2786.0 90 1892.0 91 998.0 92 998.0 93 998.0 94 592.5 95 187.0 96 187.0 97 187.0 98 355.0 99 523.0 100 523.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0078349872017476 2 0.002589529668374207 3 0.004847068353623515 4 0.014275612274370627 5 0.03552303519436412 6 0.04774030337336038 7 0.06971810645622864 8 0.08977036183697251 9 0.09780454362859503 10 0.12037993048108814 11 0.12044632867771311 12 0.13598350668795833 13 0.12356704391908716 14 0.12542619342458658 15 0.11387290721184012 16 0.11546646393083963 17 0.1253597952279616 18 0.13279639324995934 19 0.13339397701958414 20 0.12496140604821174 21 0.13120283653095982 22 0.15211826846782842 23 0.14242413176058139 24 0.1362490994744583 25 0.13306198603645925 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1506065.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.57372673288681 #Duplication Level Percentage of deduplicated Percentage of total 1 79.8451198161852 44.37290869619282 2 12.611646273365148 14.017523672956504 3 3.4518490982921217 5.754963555349443 4 1.355872876244889 3.014036348358669 5 0.6649051000284125 1.8475627166140884 6 0.42404747796901554 1.4139539197451947 7 0.28643047561956164 1.114260628603662 8 0.20321110937905987 0.9034558929374915 9 0.15170069899583974 0.7587515872064443 >10 0.8229387543881229 8.653732569842356 >50 0.0862937502815276 3.3355110209103174 >100 0.08579902751143291 9.9212817638083 >500 0.0073096240720757445 2.7452686954304246 >1k 0.0028759176677019323 2.146788932044212 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3290 0.2184500668961831 No Hit TATCAACGCAGAGTACTTTTTTTTT 2064 0.13704587783395802 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1663 0.11042020098734119 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1584 0.1051747434539678 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.639819662497967E-5 0.0 8 0.0 0.0 0.0 6.639819662497967E-5 0.0 9 0.0 0.0 0.0 1.3279639324995934E-4 0.0 10 0.0 0.0 0.0 1.3279639324995934E-4 0.0 11 0.0 0.0 0.0 1.3279639324995934E-4 0.0 12 0.0 6.639819662497967E-5 0.0 1.3279639324995934E-4 1.3279639324995934E-4 13 0.0 6.639819662497967E-5 0.0 1.3279639324995934E-4 2.655927864999187E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAGT 45 6.752911E-4 14.780441 16 CGAAATC 45 6.7597267E-4 14.778476 13 ATTCGCA 70 1.0907126E-4 12.214457 14 GAGTGTT 245 0.0 12.022176 7 TTAGACT 105 2.7236456E-7 11.760506 4 CGAACGA 130 2.6066118E-9 11.694416 16 GCGTTAT 155 2.5465852E-11 11.63565 1 CGACCAT 205 0.0 11.586684 10 CCGACCA 205 0.0 11.586684 9 CAAGACG 320 0.0 11.576748 4 CTAACAC 140 6.8394E-10 11.53089 3 GTATAAG 165 7.2759576E-12 11.505746 1 AACCGCG 175 1.8189894E-12 11.401677 7 AGAGTGT 250 0.0 11.401676 6 GACCATA 225 0.0 11.400918 11 GTGCTAA 100 1.9483086E-6 11.390689 1 ATCGCCA 260 0.0 11.328966 16 CGCAAGA 320 0.0 11.274658 2 CGCATCG 255 0.0 11.176999 13 CGCGTAA 145 1.2150849E-9 11.139198 10 >>END_MODULE