##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062428_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1506065 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262980017462727 32.0 32.0 32.0 32.0 32.0 2 31.333659569806084 32.0 32.0 32.0 32.0 32.0 3 31.43751962896688 32.0 32.0 32.0 32.0 32.0 4 31.563739280841133 32.0 32.0 32.0 32.0 32.0 5 31.47699269287846 32.0 32.0 32.0 32.0 32.0 6 35.06842599754991 36.0 36.0 36.0 36.0 36.0 7 35.08795769106911 36.0 36.0 36.0 36.0 36.0 8 35.01635121990087 36.0 36.0 36.0 36.0 36.0 9 35.16436408787138 36.0 36.0 36.0 36.0 36.0 10 35.01997988134642 36.0 36.0 36.0 36.0 36.0 11 35.16994552027967 36.0 36.0 36.0 36.0 36.0 12 35.07476569736366 36.0 36.0 36.0 36.0 36.0 13 35.11900814373882 36.0 36.0 36.0 36.0 36.0 14 35.0780484242048 36.0 36.0 36.0 36.0 36.0 15 35.03051063533115 36.0 36.0 36.0 36.0 36.0 16 35.05319956309987 36.0 36.0 36.0 36.0 36.0 17 35.02128194998224 36.0 36.0 36.0 36.0 36.0 18 35.031379123743 36.0 36.0 36.0 36.0 36.0 19 35.02158074186705 36.0 36.0 36.0 36.0 36.0 20 35.007720118321586 36.0 36.0 36.0 36.0 36.0 21 35.00631181257117 36.0 36.0 36.0 36.0 36.0 22 34.98836769993327 36.0 36.0 36.0 36.0 36.0 23 34.94669419978553 36.0 36.0 36.0 32.0 36.0 24 34.934364718654244 36.0 36.0 36.0 32.0 36.0 25 34.90139867801191 36.0 36.0 36.0 32.0 36.0 26 34.859363971674526 36.0 36.0 36.0 32.0 36.0 27 34.841476961485725 36.0 36.0 36.0 32.0 36.0 28 34.829806150464954 36.0 36.0 36.0 32.0 36.0 29 34.805473867329766 36.0 36.0 36.0 32.0 36.0 30 34.784643425084575 36.0 36.0 36.0 32.0 36.0 31 34.7858253129845 36.0 36.0 36.0 32.0 36.0 32 34.74269238047495 36.0 36.0 36.0 32.0 36.0 33 34.725773455992936 36.0 36.0 36.0 32.0 36.0 34 34.71488415174644 36.0 36.0 36.0 32.0 36.0 35 34.696836457921805 36.0 36.0 36.0 32.0 36.0 36 34.66886621759353 36.0 36.0 36.0 32.0 36.0 37 34.66591946562731 36.0 36.0 36.0 32.0 36.0 38 34.62981212630265 36.0 36.0 36.0 32.0 36.0 39 34.61718385328655 36.0 36.0 36.0 32.0 36.0 40 34.618581535325504 36.0 36.0 36.0 32.0 36.0 41 34.5871984276907 36.0 36.0 36.0 32.0 36.0 42 34.563101194171566 36.0 36.0 36.0 32.0 36.0 43 34.54626061956157 36.0 36.0 36.0 32.0 36.0 44 34.515134472947715 36.0 36.0 36.0 32.0 36.0 45 34.48313917394004 36.0 36.0 36.0 32.0 36.0 46 34.482324468067446 36.0 36.0 36.0 32.0 36.0 47 34.467688313585406 36.0 36.0 36.0 32.0 36.0 48 34.410698077440216 36.0 36.0 36.0 32.0 36.0 49 34.40565115051475 36.0 36.0 36.0 32.0 36.0 50 33.846896382294254 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 23.0 22 111.0 23 370.0 24 912.0 25 2163.0 26 4504.0 27 8536.0 28 14417.0 29 23038.0 30 34320.0 31 50510.0 32 76348.0 33 128823.0 34 283212.0 35 878773.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.4162878649529 18.27930497494762 11.631077567744356 26.67332959235512 2 16.304584558423173 20.49392700722172 36.658406440320526 26.54308199403458 3 18.833824352561766 23.947728197783473 28.435823222453955 28.782624227200802 4 12.790318586033367 15.900949563131906 35.6769745714151 35.631757279419624 5 14.697639212118998 36.28814161407376 33.306198603645925 15.708020570161315 6 34.43282691159764 35.126027766545356 16.64365956932573 13.79748575253128 7 30.182356370454865 30.173458994384028 20.85949980810883 18.784684827052274 8 28.008020902152296 33.09146683576074 19.436876894423545 19.463635367663414 9 27.50505456271808 14.143347066693668 18.612277690537926 39.73932068005033 10 16.089079820592072 26.71876711828507 31.472014820077487 25.72013824104537 11 37.63051395524097 21.052477814702552 22.154422285890714 19.162585944165755 12 24.883321768980753 23.48251901478356 28.62359858306248 23.010560633173203 13 29.936755717714707 19.52332734642927 25.012665456006218 25.527251479849806 14 23.466517049396938 19.822185629438305 24.856563295740887 31.85473402542387 15 25.180520097074165 27.530352275632193 22.00449515791151 25.284632469382128 16 25.73235550922437 25.684947196834134 23.98853967126253 24.59415762267897 17 24.130764608433235 25.84795476954846 25.190479826567913 24.830800795450394 18 24.922363908596243 24.70597218579543 26.474554551098393 23.897109354509933 19 25.771397648839855 24.974552891143475 25.067576764615072 24.18647269540159 20 25.796695361753976 24.49548990249425 25.01160308486022 24.696211650891563 21 26.608479713690976 24.28766354705806 24.20791931291146 24.8959374263395 22 25.930222135166808 24.82382898480477 24.561888099119226 24.68406078090919 23 24.52019003163874 24.54993642372673 25.277328667753384 25.652544876881144 24 24.905897155833248 24.996929083406094 25.150109723019927 24.947064037740734 25 24.952375893470734 24.673304273055944 25.209204118016153 25.16511571545717 26 24.364220667766663 25.519084501664935 25.611510791366904 24.505184039201495 27 25.311590137211876 25.127733530757308 24.764336200628794 24.79634013140203 28 24.311832490629552 25.063061687244577 25.434426800968087 25.190679021157784 29 24.54940523815373 24.999186622091344 25.215578344892155 25.235829794862774 30 24.48938126840475 25.205950606381535 25.489935693346567 24.81473243186715 31 25.05310195775083 24.910412233203747 24.626626340828583 25.409859468216844 32 24.69461809417256 25.26577538154064 24.685853532218065 25.353752992068735 33 24.37484437922666 24.879337877183254 25.372410885320356 25.373406858269732 34 24.882657787014505 25.02222679632021 25.553478767516673 24.54163664914861 35 25.327592102598494 24.835183076427644 25.400563720689345 24.436661100284514 36 24.187003880974594 25.34671478322649 25.20017396327516 25.26610737252376 37 25.205220226218657 25.05901139725045 24.75975472506167 24.976013651469227 38 24.559232171254227 24.982255081951973 25.255085271884013 25.203427474909784 39 25.09645998014694 24.54323020586761 24.97687682802535 25.383432985960102 40 25.482432697127944 24.5732421907421 25.445780892590957 24.498544219539 41 24.260241091851945 24.95582859969523 26.01169272242566 24.772237586027163 42 25.24705109009239 25.32765850079512 25.373207663679853 24.052082745432635 43 24.392506299528904 24.485397376607253 25.718013498753372 25.404082825110468 44 24.06695594147663 24.903971608131123 25.50733202086231 25.52174042952993 45 24.11748496910824 25.158077506614916 25.54942847752255 25.175009046754287 46 23.98926736699244 24.597011674825918 25.79291277046547 25.62080818771617 47 24.451401499935262 24.351206621228165 26.10889968228463 25.088492196551943 48 24.591900083993718 25.212324833257526 25.290674705275006 24.905100377473747 49 23.93601869773217 25.08152038590632 25.664297357683765 25.318163558677746 50 23.602566954281524 25.696633279440128 25.355213752394484 25.345586013883864 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 15.5 2 22.0 3 59.5 4 97.0 5 121.0 6 145.0 7 160.5 8 176.0 9 224.0 10 272.0 11 429.0 12 586.0 13 972.0 14 1358.0 15 1819.5 16 2281.0 17 2795.5 18 3310.0 19 3823.0 20 4336.0 21 5214.5 22 6093.0 23 7036.0 24 7979.0 25 9593.0 26 11207.0 27 13942.0 28 16677.0 29 19516.5 30 22356.0 31 25143.5 32 27931.0 33 32665.0 34 37399.0 35 43123.5 36 48848.0 37 55337.0 38 61826.0 39 65002.0 40 68178.0 41 72459.5 42 76741.0 43 78445.0 44 80149.0 45 87187.0 46 94225.0 47 99839.0 48 105453.0 49 108394.5 50 111336.0 51 107342.5 52 103349.0 53 101323.0 54 99297.0 55 99987.5 56 100678.0 57 98415.5 58 96153.0 59 88433.5 60 80714.0 61 71369.0 62 62024.0 63 54779.0 64 47534.0 65 41527.5 66 35521.0 67 31423.5 68 27326.0 69 24708.5 70 22091.0 71 17689.0 72 13287.0 73 11958.5 74 10630.0 75 8201.5 76 5773.0 77 5150.5 78 4528.0 79 3945.0 80 3362.0 81 2710.0 82 2058.0 83 1687.5 84 1317.0 85 1090.0 86 863.0 87 617.0 88 371.0 89 250.5 90 130.0 91 89.0 92 48.0 93 30.0 94 12.0 95 7.5 96 3.0 97 3.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014607603257495527 2 0.0035191044211239225 3 9.295747527497153E-4 4 2.655927864999186E-4 5 0.0 6 5.311855729998372E-4 7 1.9919458987493902E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.655927864999186E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1506065.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.299690456051636 #Duplication Level Percentage of deduplicated Percentage of total 1 81.3255533216655 49.03905691463552 2 11.995937431553271 14.467026277056508 3 3.121753884142466 5.6472237868130275 4 1.2070822326872002 2.911467399441515 5 0.6056075449910355 1.8258973750404406 6 0.3441338955144145 1.2450700424972647 7 0.24135236387242673 1.0187430982640573 8 0.17607927960053416 0.8494020844509423 9 0.12756396374545234 0.6922860774477994 >10 0.7111440754824692 7.9759231855395365 >50 0.07137483458813734 2.989318228686305 >100 0.06544131035344154 8.141904299527477 >500 0.005757854187203916 2.2959725437397447 >1k 0.0012180076165239054 0.9007086868598354 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 6.639819662497967E-5 0.0 0.0 0.0 0.0 11 6.639819662497967E-5 0.0 0.0 0.0 0.0 12 6.639819662497967E-5 0.0 0.0 0.0 1.3279639324995934E-4 13 6.639819662497967E-5 0.0 0.0 0.0 1.99194589874939E-4 14 6.639819662497967E-5 0.0 0.0 0.0 3.3199098312489833E-4 15 6.639819662497967E-5 0.0 0.0 0.0 4.6478737637485764E-4 16 6.639819662497967E-5 0.0 0.0 0.0 4.6478737637485764E-4 17 6.639819662497967E-5 0.0 0.0 6.639819662497967E-5 4.6478737637485764E-4 18 6.639819662497967E-5 0.0 0.0 1.99194589874939E-4 4.6478737637485764E-4 19 6.639819662497967E-5 0.0 0.0 1.99194589874939E-4 4.6478737637485764E-4 20 6.639819662497967E-5 0.0 0.0 5.311855729998373E-4 4.6478737637485764E-4 21 6.639819662497967E-5 0.0 0.0 5.311855729998373E-4 4.6478737637485764E-4 22 6.639819662497967E-5 0.0 0.0 6.639819662497967E-4 5.311855729998373E-4 23 6.639819662497967E-5 0.0 0.0 0.0012615657358746137 5.311855729998373E-4 24 6.639819662497967E-5 0.0 0.0 0.0018591495054994306 5.311855729998373E-4 25 6.639819662497967E-5 0.0 0.0 0.0025231314717492274 5.311855729998373E-4 26 6.639819662497967E-5 0.0 0.0 0.0030543170447490647 5.311855729998373E-4 27 6.639819662497967E-5 0.0 0.0 0.004581475567123597 5.311855729998373E-4 28 6.639819662497967E-5 0.0 0.0 0.01195167539249634 5.311855729998373E-4 29 6.639819662497967E-5 0.0 0.0 0.026957667829741745 5.311855729998373E-4 30 6.639819662497967E-5 0.0 0.0 0.05716884729410749 5.311855729998373E-4 31 6.639819662497967E-5 0.0 0.0 0.12814851948621075 5.311855729998373E-4 32 6.639819662497967E-5 0.0 0.0 0.21187664543031012 5.311855729998373E-4 33 6.639819662497967E-5 0.0 0.0 0.29919027399215836 5.311855729998373E-4 34 6.639819662497967E-5 0.0 0.0 0.39752600319375325 5.311855729998373E-4 35 6.639819662497967E-5 0.0 0.0 0.502767144844346 5.311855729998373E-4 36 6.639819662497967E-5 0.0 0.0 0.6546198205256745 5.311855729998373E-4 37 6.639819662497967E-5 0.0 0.0 0.8774521683991062 5.311855729998373E-4 38 6.639819662497967E-5 0.0 0.0 1.1718617722342661 5.311855729998373E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATACG 45 0.0013984161 24.444315 4 CGCAATA 435 0.0 19.724033 36 TAGGACG 820 0.0 18.243805 4 TTAGGAC 560 0.0 17.285622 3 TACACGG 115 4.2745105E-6 17.2173 5 TAGCGGC 500 0.0 17.15991 30 TCTAGCG 500 0.0 17.15991 28 AGGACGT 815 0.0 17.006044 5 GTATAGG 220 1.8189894E-12 17.002731 1 CAATACG 495 0.0 16.888802 38 GACGTGA 365 0.0 16.876625 7 ATACGAA 510 0.0 16.82344 40 GTCCTAA 460 0.0 16.741821 1 GGACGTG 805 0.0 16.397429 6 GTATCAA 2970 0.0 16.373001 1 AATACGA 525 0.0 16.34277 39 TGTAGGA 925 0.0 16.173962 2 CGAATGC 545 0.0 16.146706 43 GCAATAC 545 0.0 16.146706 37 GTATATC 260 0.0 16.076838 3 >>END_MODULE