##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062427_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 770713 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.1419412933219 32.0 32.0 32.0 32.0 32.0 2 30.87108690264729 32.0 32.0 32.0 32.0 32.0 3 30.864892638375114 32.0 32.0 32.0 32.0 32.0 4 30.90240076396791 32.0 32.0 32.0 32.0 32.0 5 30.75044536682267 32.0 32.0 32.0 32.0 32.0 6 34.3832723724655 36.0 36.0 36.0 32.0 36.0 7 34.24709068096684 36.0 36.0 36.0 32.0 36.0 8 34.25767308972341 36.0 36.0 36.0 32.0 36.0 9 34.367335181838115 36.0 36.0 36.0 32.0 36.0 10 34.1166919462887 36.0 36.0 36.0 32.0 36.0 11 34.39912263060309 36.0 36.0 36.0 32.0 36.0 12 34.196646481894035 36.0 36.0 36.0 32.0 36.0 13 34.29483089035737 36.0 36.0 36.0 32.0 36.0 14 34.2056978408305 36.0 36.0 36.0 32.0 36.0 15 34.16148293852576 36.0 36.0 36.0 32.0 36.0 16 34.15787459144973 36.0 36.0 36.0 32.0 36.0 17 34.07554303612369 36.0 36.0 36.0 32.0 36.0 18 34.10656236497892 36.0 36.0 36.0 32.0 36.0 19 34.07544572363513 36.0 36.0 36.0 32.0 36.0 20 34.05866515810684 36.0 36.0 36.0 32.0 36.0 21 34.003421507097976 36.0 36.0 36.0 32.0 36.0 22 33.967762318787926 36.0 36.0 36.0 32.0 36.0 23 33.89777777201111 36.0 36.0 36.0 32.0 36.0 24 33.881337151442885 36.0 36.0 36.0 32.0 36.0 25 33.3584953153768 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 22.0 5 85.0 6 126.0 7 31.0 8 105.0 9 139.0 10 87.0 11 34.0 12 64.0 13 45.0 14 174.0 15 212.0 16 307.0 17 422.0 18 609.0 19 779.0 20 1206.0 21 1627.0 22 2395.0 23 3297.0 24 4679.0 25 6231.0 26 8655.0 27 11147.0 28 15220.0 29 20455.0 30 26597.0 31 36885.0 32 53407.0 33 76888.0 34 171272.0 35 327506.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.39288295571182 16.821361513617603 11.566754081257939 25.21900144941264 2 15.611015021545544 20.18352314086154 37.68387671874534 26.521585118847586 3 20.347225826542793 24.106633103233506 27.48027715783464 28.065863912389062 4 12.75985263067737 15.34854869248009 35.11376480863141 36.77783386821113 5 14.154357363516004 36.87975390046987 33.64281820305807 15.323070532956052 6 34.50981308471874 33.89736340282132 17.26477220065191 14.328051311808023 7 29.692691407330273 30.732287461876933 20.601711496839144 18.973309633953647 8 28.383385170803926 32.98278649671768 20.011947508879466 18.62188082359893 9 27.1277134596952 15.344992843765503 18.45035703246151 39.076936664077785 10 15.960447023459249 27.14707529069125 31.808787443021135 25.08369024282836 11 36.76585595252633 21.73482086950196 21.353280313442646 20.146042864529072 12 24.185254284853084 24.059099271393084 29.035921048528756 22.71972539522508 13 30.42048705204385 19.891032952528924 24.93524073299436 24.75323926243287 14 23.660210874208182 19.738537807178453 25.063917022194275 31.53733429641909 15 25.535355897196077 26.82397718932471 23.81819008463072 23.82247682884849 16 25.45060843179433 25.93719799233095 25.060661325352534 23.551532250522182 17 23.593495660352602 25.95240353199621 26.753689122496144 23.70041168515504 18 24.92526124459354 24.462342191115543 28.097094770430868 22.515301793860054 19 24.554943755700435 26.97790504600625 25.58745345456152 22.879697743731793 20 24.62946483667093 24.113723019363054 27.789909907569193 23.466902236396823 21 25.07135980542841 25.471780233886065 24.517111412242055 24.939748548443465 22 24.044079426135774 26.07963405759434 25.512267387462312 24.36401912880757 23 23.067977312742414 25.537717890578808 25.6636282720132 25.73067652466557 24 23.25282858048656 26.80797875381345 25.788286532474753 24.15090613322523 25 24.699164598734555 25.225350465771935 25.206121945198717 24.869362990294793 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 123.0 1 123.0 2 334.5 3 546.0 4 546.0 5 546.0 6 1499.5 7 2453.0 8 2453.0 9 2453.0 10 2511.0 11 2569.0 12 2569.0 13 2569.0 14 2420.5 15 2272.0 16 2272.0 17 2272.0 18 3753.5 19 5235.0 20 5235.0 21 5235.0 22 8462.5 23 11690.0 24 11690.0 25 11690.0 26 17124.5 27 22559.0 28 22559.0 29 22559.0 30 29180.0 31 35801.0 32 35801.0 33 35801.0 34 41415.0 35 47029.0 36 47029.0 37 47029.0 38 53341.5 39 59654.0 40 59654.0 41 59654.0 42 71471.5 43 83289.0 44 83289.0 45 83289.0 46 106081.5 47 128874.0 48 128874.0 49 128874.0 50 117033.0 51 105192.0 52 105192.0 53 105192.0 54 92539.5 55 79887.0 56 79887.0 57 79887.0 58 72525.0 59 65163.0 60 65163.0 61 65163.0 62 57056.0 63 48949.0 64 48949.0 65 48949.0 66 40609.0 67 32269.0 68 32269.0 69 32269.0 70 24725.0 71 17181.0 72 17181.0 73 17181.0 74 13542.5 75 9904.0 76 9904.0 77 9904.0 78 7878.5 79 5853.0 80 5853.0 81 5853.0 82 4095.5 83 2338.0 84 2338.0 85 2338.0 86 1726.5 87 1115.0 88 1115.0 89 1115.0 90 729.5 91 344.0 92 344.0 93 344.0 94 205.5 95 67.0 96 67.0 97 67.0 98 212.0 99 357.0 100 357.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007265999146245101 2 0.002594999695087536 3 0.004281749496894434 4 0.017126997987577736 5 0.0380167455330324 6 0.04722899445059315 7 0.06617249222473216 8 0.08797048966346746 9 0.09796123848955449 10 0.11807248612648287 11 0.1218352356843598 12 0.1329937343732362 13 0.1218352356843598 14 0.1252087352879736 15 0.11651548630943036 16 0.11223373681253593 17 0.12326248551665796 18 0.13390198426651684 19 0.13429123422078 20 0.1230029855471492 21 0.1326044844189731 22 0.1547917318119715 23 0.14506048295539326 24 0.1387027337024288 25 0.13273423440372745 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 770713.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.74589723891473 #Duplication Level Percentage of deduplicated Percentage of total 1 80.63127134254114 44.948625665043494 2 12.21002620257518 13.613177319464246 3 3.3146268349337134 5.543305407766919 4 1.2797259755233599 2.8535789090198054 5 0.6418013863655447 1.7888897066063336 6 0.3834744038631273 1.2826274826904789 7 0.24768524267389685 0.9665205259986299 8 0.17182306679607584 0.7662744819911382 9 0.14118431845121782 0.7083401857315023 >10 0.7999674932144424 8.577194292031455 >50 0.09738047223458993 3.8753641948614357 >100 0.0726263519239522 7.917723055590893 >500 0.00420345445190704 1.5228543480202406 >1k 0.0037364039572507016 3.865456843542913 >5k 4.670504946563377E-4 1.7700675816405547 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 7342 0.9526243880666344 No Hit TCCATGTACTCTGCGTTGATACCAC 6255 0.8115861546386268 No Hit GAGTACATGGAAGCAGTGGTATCAA 3543 0.459704195984757 No Hit CATGTACTCTGCGTTGATACCACTG 3055 0.3963862034246211 No Hit GTATCAACGCAGAGTACTTTTTTTT 2694 0.34954645892829106 No Hit GCGTTGATACCACTGCTTCCATGTA 1962 0.2545694700880873 No Hit GCTTCCATGTACTCTGCGTTGATAC 1954 0.25353147021005223 No Hit CCCATGTACTCTGCGTTGATACCAC 1895 0.24587622110954405 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1757 0.22797072321344003 No Hit TATCAACGCAGAGTACTTTTTTTTT 1714 0.2223914738690018 No Hit GTACATGGGAAGCAGTGGTATCAAC 1713 0.22226172388424745 No Hit CATGGAAGCAGTGGTATCAACGCAG 1615 0.20954622537831852 No Hit GTATCAACGCAGAGTACATGGAAGC 1500 0.19462497713156518 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1378 0.17879547899153123 No Hit ACTCTGCGTTGATACCACTGCTTCC 1269 0.16465273065330413 No Hit CAGTGGTATCAACGCAGAGTACATG 1253 0.16257673089723412 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1247 0.16179823098870788 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1144 0.14843398255900705 No Hit GGTATCAACGCAGAGTACTTTTTTT 952 0.1235219854861667 No Hit GTATCAACGCAGAGTACATGGGAAG 895 0.11612623635516722 No Hit GTACATGGGGTGGTATCAACGCAAA 871 0.11301223672106218 No Hit TATCAACGCAGAGTACATGGAAGCA 790 0.10250248795595766 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.2974998475437678E-4 0.0 4 0.0 0.0 0.0 1.2974998475437678E-4 0.0 5 0.0 0.0 0.0 1.2974998475437678E-4 0.0 6 0.0 0.0 0.0 1.2974998475437678E-4 0.0 7 0.0 0.0 0.0 1.2974998475437678E-4 0.0 8 0.0 0.0 0.0 1.2974998475437678E-4 0.0 9 0.0 0.0 0.0 1.2974998475437678E-4 0.0 10 0.0 0.0 0.0 2.5949996950875356E-4 0.0 11 0.0 0.0 0.0 2.5949996950875356E-4 0.0 12 0.0 0.0 0.0 2.5949996950875356E-4 0.0 13 0.0 0.0 0.0 2.5949996950875356E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAAT 30 7.700507E-4 19.00637 16 CGCAAGA 145 0.0 15.717151 2 ACGCGGG 45 6.752988E-4 14.77889 14 ACCGACC 45 6.756316E-4 14.777929 8 AATCGTA 45 6.756316E-4 14.777929 13 CGCGGTC 40 0.0052778134 14.24922 10 CAAGACG 160 0.0 14.246444 4 GACCATA 115 2.5465852E-11 14.04271 11 GCGCAAG 170 0.0 13.963472 1 AGAGCGA 150 0.0 13.9343815 15 CGACCAT 110 1.8553692E-10 13.817427 10 GCTCGTA 50 0.0014982318 13.300137 9 CTCGTAG 50 0.0014989657 13.299273 10 GAGCGAA 160 0.0 13.06688 16 AAGACGG 175 0.0 13.026166 5 GGTTCTA 95 7.366725E-8 13.0001335 13 TTAGAAC 95 7.398012E-8 12.995912 3 CCGACCA 125 1.0186341E-10 12.920133 9 CGAAAGC 170 0.0 12.858086 19 CGGACCA 170 0.0 12.853072 9 >>END_MODULE