##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062426_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1292237 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.243721546434593 32.0 32.0 32.0 32.0 32.0 2 31.352063901590807 32.0 32.0 32.0 32.0 32.0 3 31.47724449926755 32.0 32.0 32.0 32.0 32.0 4 31.59669549780729 32.0 32.0 32.0 32.0 32.0 5 31.51768677107992 32.0 32.0 32.0 32.0 32.0 6 35.11629523067363 36.0 36.0 36.0 36.0 36.0 7 35.13878491329377 36.0 36.0 36.0 36.0 36.0 8 35.07123228943298 36.0 36.0 36.0 36.0 36.0 9 35.21999757010517 36.0 36.0 36.0 36.0 36.0 10 35.08608637579639 36.0 36.0 36.0 36.0 36.0 11 35.23045849948578 36.0 36.0 36.0 36.0 36.0 12 35.13918499470299 36.0 36.0 36.0 36.0 36.0 13 35.18506434965103 36.0 36.0 36.0 36.0 36.0 14 35.145100318285266 36.0 36.0 36.0 36.0 36.0 15 35.10048466341701 36.0 36.0 36.0 36.0 36.0 16 35.1127239043612 36.0 36.0 36.0 36.0 36.0 17 35.09344106382962 36.0 36.0 36.0 36.0 36.0 18 35.10763582841228 36.0 36.0 36.0 36.0 36.0 19 35.09025588959301 36.0 36.0 36.0 36.0 36.0 20 35.08363017000752 36.0 36.0 36.0 36.0 36.0 21 35.062545028504836 36.0 36.0 36.0 36.0 36.0 22 35.049583009927744 36.0 36.0 36.0 36.0 36.0 23 35.01357336154281 36.0 36.0 36.0 36.0 36.0 24 34.995062051311024 36.0 36.0 36.0 36.0 36.0 25 34.967398395186024 36.0 36.0 36.0 36.0 36.0 26 34.91425644057553 36.0 36.0 36.0 32.0 36.0 27 34.8907561074323 36.0 36.0 36.0 32.0 36.0 28 34.87216741201498 36.0 36.0 36.0 32.0 36.0 29 34.84734147064354 36.0 36.0 36.0 32.0 36.0 30 34.83439338139985 36.0 36.0 36.0 32.0 36.0 31 34.82377690779632 36.0 36.0 36.0 32.0 36.0 32 34.79076283994345 36.0 36.0 36.0 32.0 36.0 33 34.772958830307445 36.0 36.0 36.0 32.0 36.0 34 34.75725505460686 36.0 36.0 36.0 32.0 36.0 35 34.72566410031597 36.0 36.0 36.0 32.0 36.0 36 34.688691780222975 36.0 36.0 36.0 32.0 36.0 37 34.665545097377645 36.0 36.0 36.0 32.0 36.0 38 34.62040090169218 36.0 36.0 36.0 32.0 36.0 39 34.590986792670385 36.0 36.0 36.0 32.0 36.0 40 34.571724846138906 36.0 36.0 36.0 32.0 36.0 41 34.55754246318593 36.0 36.0 36.0 32.0 36.0 42 34.515122226031295 36.0 36.0 36.0 32.0 36.0 43 34.520167740128166 36.0 36.0 36.0 32.0 36.0 44 34.491279850368 36.0 36.0 36.0 32.0 36.0 45 34.42577329081276 36.0 36.0 36.0 32.0 36.0 46 34.4282387828239 36.0 36.0 36.0 32.0 36.0 47 34.395153520600324 36.0 36.0 36.0 32.0 36.0 48 34.36563107231878 36.0 36.0 36.0 32.0 36.0 49 34.35709780790985 36.0 36.0 36.0 32.0 36.0 50 33.832193320575094 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 5.0 21 33.0 22 91.0 23 314.0 24 831.0 25 1952.0 26 4234.0 27 7771.0 28 13089.0 29 19741.0 30 28902.0 31 41866.0 32 63142.0 33 102977.0 34 229238.0 35 778047.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78377834517357 18.175893899910452 11.886185116360425 26.154142638555548 2 15.68697555241361 20.336126259776986 37.72308006621302 26.25381812159639 3 18.748336212073376 24.091417021092187 28.788715958125167 28.371530808709274 4 12.188640465054371 15.923175023757272 36.47878560882068 35.40939890236768 5 13.862405938234193 37.12619057200078 34.163264295376386 14.84813919438864 6 34.30269046323761 35.81480400949985 16.647410563591183 13.235094963671356 7 29.84377466654698 30.685029669503095 20.792873747519803 18.678321916430125 8 27.586503095020497 34.46651040018201 19.34459390963113 18.602392595166368 9 27.095494092801864 14.237249049516459 18.538859357842252 40.12839749983942 10 15.292163898727557 27.671549413923298 32.70367587369809 24.33261081365106 11 37.313356605638134 21.12723904361197 22.37329530109415 19.18610904965575 12 23.857233618910463 23.96626934532907 29.730769201005696 22.44572783475477 13 29.853424720078436 19.868878541629748 25.29845531431154 24.979241423980277 14 22.694443821063786 20.041911816485676 25.576732441494865 31.686911920955673 15 24.743371378470048 28.09028065285238 22.523035635104087 24.643312333573487 16 25.000909275930034 26.22483337034925 24.766819089687107 24.00743826403361 17 23.378451476006337 26.54242217178428 26.09180823641484 23.987318115794547 18 24.176447509241726 25.37359632946588 27.264580723195515 23.18537543809688 19 25.157382121081508 25.704804923555045 25.55591582658599 23.58189712877746 20 24.863627956791206 25.349374766393474 26.075789503009123 23.711207773806198 21 25.595459656394297 24.98597393512181 24.78245089716515 24.636115511318742 22 24.764110608193388 25.72817524958657 25.368101981292906 24.139612160927136 23 23.8233389076462 25.347207981198494 25.875516642844925 24.95393646831038 24 24.14827930170704 25.894785554043104 25.732586205162058 24.2243489390878 25 24.4859108661956 25.288704780934147 25.83109754634792 24.394286806522334 26 23.540031743403105 25.88201699842985 26.427350400893957 24.150600857273087 27 24.51098366630889 25.98548099148995 25.437439107532136 24.066096234669025 28 23.793932537142954 25.55963031549166 25.97596261366916 24.67047453369622 29 23.914885582133927 25.67888088640087 25.88673749474748 24.519496036717722 30 24.21575918349343 25.55668967844134 26.10713050315074 24.120420634914495 31 24.21181253903115 25.418170196333957 25.69141728645751 24.678599978177377 32 23.970989841646695 25.806411672162305 25.693351916095885 24.529246570095115 33 23.785497551919654 25.393329551777267 26.1665623256415 24.65461057066157 34 23.939726226690613 25.87249862060907 26.464495289950683 23.723279862749635 35 24.610346244535638 25.57727413779361 25.995308910052877 23.817070707617873 36 23.78124136671524 25.81801944999253 26.068437910383313 24.332301272908914 37 24.68804097081263 25.583000641523192 25.472030285466214 24.25692810219797 38 24.02531424189216 25.833651257470574 25.734907760728102 24.406126739909165 39 24.38995323613238 25.39627018882759 25.587643752655282 24.626132822384747 40 25.029077483464718 25.37351894428034 25.882249153986457 23.715154418268476 41 23.989484900989524 25.377697744299226 26.554881186655386 24.07793616805586 42 24.75134205258014 25.974492295144003 25.85129507977252 23.422870572503342 43 23.975787723149857 25.360750388667096 26.060312465902154 24.603149422280897 44 23.6688006921331 25.75812331638856 26.162151370066017 24.410924621412324 45 23.733417322054702 25.89045198365315 26.058068295521643 24.318062398770504 46 23.892134337586683 25.294276514292658 26.093510710496602 24.720078437624057 47 24.397072673201585 25.085259128163024 26.2853485854375 24.232319613197888 48 24.231468376157007 26.19070650352838 25.373209403538205 24.204615716776413 49 23.763597544413294 25.719198568064527 26.076795510421075 24.440408377101104 50 23.509696750673445 26.52686774949177 25.327242603330504 24.63619289650428 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 34.0 2 37.0 3 95.5 4 154.0 5 183.5 6 213.0 7 201.5 8 190.0 9 242.0 10 294.0 11 445.0 12 596.0 13 1073.5 14 1551.0 15 2071.0 16 2591.0 17 3104.5 18 3618.0 19 4004.0 20 4390.0 21 5411.5 22 6433.0 23 7104.0 24 7775.0 25 9548.5 26 11322.0 27 14837.5 28 18353.0 29 20618.5 30 22884.0 31 25394.5 32 27905.0 33 32327.0 34 36749.0 35 41869.5 36 46990.0 37 52821.0 38 58652.0 39 60668.5 40 62685.0 41 66032.5 42 69380.0 43 70509.5 44 71639.0 45 77954.5 46 84270.0 47 89065.5 48 93861.0 49 94187.5 50 94514.0 51 91342.5 52 88171.0 53 85810.0 54 83449.0 55 82952.0 56 82455.0 57 79946.5 58 77438.0 59 70397.5 60 63357.0 61 56085.5 62 48814.0 63 42562.0 64 36310.0 65 30855.0 66 25400.0 67 22370.5 68 19341.0 69 17187.0 70 15033.0 71 11887.5 72 8742.0 73 7759.5 74 6777.0 75 5043.0 76 3309.0 77 2945.0 78 2581.0 79 2116.5 80 1652.0 81 1324.0 82 996.0 83 814.5 84 633.0 85 512.0 86 391.0 87 292.0 88 193.0 89 127.0 90 61.0 91 42.5 92 24.0 93 16.5 94 9.0 95 10.5 96 12.0 97 10.5 98 9.0 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013465022283064173 2 0.0034049481635334694 3 3.869259276742579E-4 4 7.738518553485158E-5 5 7.738518553485158E-5 6 4.643111132091095E-4 7 7.738518553485158E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1292237.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.48612807694952 #Duplication Level Percentage of deduplicated Percentage of total 1 81.51104056204304 50.93309320245248 2 11.806115457013 14.754368850763356 3 3.1177173145487576 5.844422502738504 4 1.2377729394351724 3.0937455369491387 5 0.619069804455585 1.934163754489189 6 0.35013218834992743 1.3127042859057707 7 0.2538144745113237 1.110191863346875 8 0.16382306478773484 0.8189335206627839 9 0.12257870149449017 0.6893521596981791 >10 0.6872352068474054 8.06779293493991 >50 0.06934285215505295 3.0472297096945424 >100 0.05799027211520992 6.962106452183637 >500 0.003117742817906808 1.2637303337628376 >1k 2.494194254325446E-4 0.16816489241291258 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.738518553485158E-5 2 0.0 0.0 0.0 0.0 7.738518553485158E-5 3 0.0 0.0 0.0 0.0 7.738518553485158E-5 4 0.0 0.0 0.0 0.0 7.738518553485158E-5 5 0.0 0.0 0.0 0.0 7.738518553485158E-5 6 0.0 0.0 0.0 0.0 7.738518553485158E-5 7 0.0 0.0 0.0 0.0 7.738518553485158E-5 8 0.0 0.0 0.0 0.0 7.738518553485158E-5 9 0.0 0.0 0.0 0.0 7.738518553485158E-5 10 0.0 0.0 0.0 0.0 1.5477037106970316E-4 11 0.0 0.0 0.0 0.0 1.5477037106970316E-4 12 0.0 0.0 0.0 1.5477037106970316E-4 3.8692592767425787E-4 13 0.0 0.0 0.0 1.5477037106970316E-4 3.8692592767425787E-4 14 0.0 0.0 0.0 2.3215555660455474E-4 3.8692592767425787E-4 15 0.0 0.0 0.0 2.3215555660455474E-4 6.964666698136642E-4 16 0.0 0.0 0.0 2.3215555660455474E-4 7.738518553485157E-4 17 0.0 0.0 0.0 3.095407421394063E-4 7.738518553485157E-4 18 0.0 7.738518553485158E-5 0.0 3.095407421394063E-4 7.738518553485157E-4 19 0.0 7.738518553485158E-5 0.0 4.643111132091095E-4 7.738518553485157E-4 20 0.0 7.738518553485158E-5 0.0 5.41696298743961E-4 0.0010060074119530706 21 0.0 7.738518553485158E-5 0.0 6.964666698136642E-4 0.0011607777830227738 22 0.0 7.738518553485158E-5 0.0 0.0013929333396273285 0.0011607777830227738 23 0.0 7.738518553485158E-5 0.0 0.002708481493719805 0.0011607777830227738 24 0.0 7.738518553485158E-5 0.0 0.004024029647812282 0.0011607777830227738 25 0.0 7.738518553485158E-5 0.0 0.005262192616369907 0.0011607777830227738 26 0.0 7.738518553485158E-5 0.0 0.007583748182415455 0.0011607777830227738 27 0.0 7.738518553485158E-5 0.0 0.00982791856292615 0.0011607777830227738 28 0.0 7.738518553485158E-5 0.0 0.016328274147853684 0.0012381629685576253 29 0.0 7.738518553485158E-5 0.0 0.026697889009523794 0.0012381629685576253 30 0.0 7.738518553485158E-5 0.0 0.04728234836179431 0.0012381629685576253 31 0.0 7.738518553485158E-5 0.0 0.08218306703801238 0.0012381629685576253 32 0.0 7.738518553485158E-5 0.0 0.12203643758846094 0.0012381629685576253 33 0.0 7.738518553485158E-5 0.0 0.16490783037476872 0.0012381629685576253 34 0.0 7.738518553485158E-5 0.0 0.21420219356046918 0.0015477037106970315 35 0.0 7.738518553485158E-5 0.0 0.2648121049002621 0.0015477037106970315 36 0.0 7.738518553485158E-5 0.0 0.3416555941363697 0.0015477037106970315 37 0.0 1.5477037106970316E-4 0.0 0.4551022761304621 0.0015477037106970315 38 0.0 1.5477037106970316E-4 0.0 0.5946277656497996 0.0015477037106970315 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCG 145 0.0 22.75836 8 TACCGTC 155 0.0 22.70942 7 ATACCGT 160 0.0 22.000599 6 ACGATTA 100 1.1236825E-6 19.799774 40 ACGTATG 100 1.1236825E-6 19.799774 22 TGTAGGA 890 0.0 19.529377 2 TCTAGCG 295 0.0 19.38961 28 TATAGGA 205 0.0 19.318348 2 CGTCGTA 160 5.2750693E-11 19.249779 10 GATATAC 310 0.0 19.166264 1 TAGCGGC 300 0.0 19.06645 30 GACGTGG 455 0.0 18.856926 7 TAGGACG 605 0.0 18.54596 4 TAGGACC 775 0.0 18.452116 4 GTCCTAC 780 0.0 18.33809 1 CGCAATA 300 0.0 18.333124 36 GTAGGAC 940 0.0 18.255817 3 CTGTAGG 935 0.0 18.12235 1 CCGTCGT 170 1.2732926E-10 18.11744 9 TAACGCC 270 0.0 17.926414 4 >>END_MODULE