##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062424_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1283154 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.17825529905218 32.0 32.0 32.0 32.0 32.0 2 31.167019703013043 32.0 32.0 32.0 32.0 32.0 3 31.335621445282484 32.0 32.0 32.0 32.0 32.0 4 31.49662706113218 32.0 32.0 32.0 32.0 32.0 5 31.369890909430982 32.0 32.0 32.0 32.0 32.0 6 34.95379899840549 36.0 36.0 36.0 36.0 36.0 7 34.961629703059806 36.0 36.0 36.0 36.0 36.0 8 34.89194749811792 36.0 36.0 36.0 32.0 36.0 9 35.06378891387939 36.0 36.0 36.0 36.0 36.0 10 34.889862011886336 36.0 36.0 36.0 32.0 36.0 11 35.07749732300254 36.0 36.0 36.0 36.0 36.0 12 34.95191457923211 36.0 36.0 36.0 32.0 36.0 13 35.019153585617936 36.0 36.0 36.0 36.0 36.0 14 34.97148510623043 36.0 36.0 36.0 32.0 36.0 15 34.921084296974485 36.0 36.0 36.0 32.0 36.0 16 34.93935801938037 36.0 36.0 36.0 32.0 36.0 17 34.90883557234751 36.0 36.0 36.0 32.0 36.0 18 34.93165512479406 36.0 36.0 36.0 32.0 36.0 19 34.90993520653016 36.0 36.0 36.0 32.0 36.0 20 34.89057198122751 36.0 36.0 36.0 32.0 36.0 21 34.89172928580669 36.0 36.0 36.0 32.0 36.0 22 34.867761001407466 36.0 36.0 36.0 32.0 36.0 23 34.82535767335799 36.0 36.0 36.0 32.0 36.0 24 34.79900775744766 36.0 36.0 36.0 32.0 36.0 25 34.78311176990447 36.0 36.0 36.0 32.0 36.0 26 34.72945647989251 36.0 36.0 36.0 32.0 36.0 27 34.70805063149084 36.0 36.0 36.0 32.0 36.0 28 34.69868932333921 36.0 36.0 36.0 32.0 36.0 29 34.667920608126536 36.0 36.0 36.0 32.0 36.0 30 34.64703613128276 36.0 36.0 36.0 32.0 36.0 31 34.656063107000406 36.0 36.0 36.0 32.0 36.0 32 34.619235882832456 36.0 36.0 36.0 32.0 36.0 33 34.59799213500484 36.0 36.0 36.0 32.0 36.0 34 34.586753421646975 36.0 36.0 36.0 32.0 36.0 35 34.566512671121316 36.0 36.0 36.0 32.0 36.0 36 34.52356069497504 36.0 36.0 36.0 32.0 36.0 37 34.52581607507751 36.0 36.0 36.0 32.0 36.0 38 34.48445237282509 36.0 36.0 36.0 32.0 36.0 39 34.472301064408484 36.0 36.0 36.0 32.0 36.0 40 34.475850911114335 36.0 36.0 36.0 32.0 36.0 41 34.4294862502864 36.0 36.0 36.0 32.0 36.0 42 34.41829273805015 36.0 36.0 36.0 32.0 36.0 43 34.40475110547916 36.0 36.0 36.0 32.0 36.0 44 34.3631972467841 36.0 36.0 36.0 32.0 36.0 45 34.310598727822224 36.0 36.0 36.0 32.0 36.0 46 34.3350860457903 36.0 36.0 36.0 32.0 36.0 47 34.31274266378003 36.0 36.0 36.0 32.0 36.0 48 34.26928412333983 36.0 36.0 36.0 32.0 36.0 49 34.267592977927826 36.0 36.0 36.0 32.0 36.0 50 33.657058311005535 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 5.0 21 29.0 22 100.0 23 276.0 24 830.0 25 1999.0 26 4154.0 27 7767.0 28 13524.0 29 21890.0 30 32548.0 31 48952.0 32 74291.0 33 126160.0 34 268617.0 35 682012.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.10312037699554 18.489835430784122 11.734032951255898 26.67301124096444 2 16.3921892596475 20.700098588969727 36.247228402975594 26.66048374840718 3 18.577494030288104 24.108673695236078 28.77151746023829 28.54231481423753 4 12.684399575731927 15.921197115538233 35.984930846018905 35.40947246271094 5 14.825967888499743 36.2018900303471 33.16803750757898 15.804104573574177 6 34.396136997553675 35.431793863056996 16.518840008198595 13.653229131190736 7 30.054225759339875 30.45012523828005 20.921962601527174 18.5736864008529 8 28.125306861062665 32.741666238035336 19.6038823087486 19.529144592153397 9 27.56255289700223 14.00681445874774 18.64608612839924 39.784546515850785 10 16.205615226231615 26.508041902998393 31.18628005679755 26.100062813972446 11 37.76522537435101 20.901310364928918 22.227339820473617 19.106124440246454 12 24.77270849796673 23.636523753189405 28.359495430790073 23.231272318053794 13 29.515864814355876 19.341482004498292 25.27568787534466 25.866965305801177 14 23.614702522066718 19.822796016690127 24.667109325926585 31.89539213531657 15 25.385573360641047 27.295242815749315 21.891526660089124 25.42765716352051 16 25.8798242455699 25.67345774552392 23.725289404077763 24.721428604828414 17 24.148387488953002 25.780927308803154 25.125900710281073 24.944784491962775 18 25.15754149540897 24.6087375326734 26.13840583437374 24.095315137543896 19 25.84444267796383 25.096208249360558 24.902233091273533 24.15711598140208 20 25.827375357907158 24.36176795614556 24.70740067053526 25.103456015412025 21 26.965118762050384 24.32700985228585 23.872193049314426 24.83567833634934 22 26.01098543121091 24.590501218092296 24.376107622311896 25.0224057283849 23 24.526985848931616 24.267469064508234 25.16814037909713 26.03740470746302 24 24.92421018833281 25.248021671599822 24.713245643157407 25.11452249690996 25 25.0157814260798 24.581071328928562 24.989128350922805 25.414018894068835 26 24.56330261215723 25.41994179965928 25.40708285989055 24.609672728292942 27 25.461869736602154 24.95164259317276 24.519036686165496 25.06745098405959 28 24.44071405302871 24.7914124103576 25.372558554935733 25.39531498167796 29 24.48373305152772 24.951019129426395 25.26041301355878 25.304834805487104 30 24.570082780398923 25.161360210855438 25.394847383868186 24.87370962487745 31 25.1386817170815 24.85196632672306 24.398552317180947 25.61079963901449 32 24.725559052148068 25.098234506536237 24.44811768501676 25.728088756298934 33 24.481083330605678 24.615361834978497 25.213029768835227 25.690525065580594 34 25.15169652278682 24.78533363883057 25.464831189397373 24.598138648985234 35 25.751234847882635 24.569069651811084 25.202430885147066 24.477264615159207 36 24.41515203942785 25.242800162724038 24.899037839573428 25.443009958274686 37 25.5491546610929 25.040330311092823 24.509684729970058 24.900830297844216 38 24.67583781837566 24.723065197162615 25.182947643073238 25.418149341388485 39 25.329461623468426 24.521686407087536 24.552391996595887 25.59645997284815 40 25.582665837459885 24.736547600677707 25.186298760709942 24.494487801152474 41 24.37088611343611 24.9692554440075 25.801813344306296 24.85804509825009 42 25.71600914621316 25.23025295482849 25.097065512011806 23.95667238694654 43 24.67653921509032 24.201148108488926 25.49982309216197 25.62248958425879 44 24.31391711361224 24.82336492735868 25.152943450279547 25.709774508749533 45 24.393486674241753 25.115379759561208 25.26454346087843 25.226590105318614 46 24.193373666273622 24.639618190504173 25.56133212485183 25.60567601837037 47 24.565017137459726 24.394266003924706 25.879200781823535 25.16151607679203 48 25.048591205732123 25.25152865517311 24.849082806896135 24.850797332198628 49 24.109576870741936 25.107586462731675 25.43802224830379 25.3448144182226 50 23.982642755774254 25.507947999965708 24.956727685630632 25.55268155862941 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 17.5 2 21.0 3 51.0 4 81.0 5 92.5 6 104.0 7 113.5 8 123.0 9 187.0 10 251.0 11 343.0 12 435.0 13 731.0 14 1027.0 15 1341.5 16 1656.0 17 2129.5 18 2603.0 19 2990.5 20 3378.0 21 4315.0 22 5252.0 23 5910.0 24 6568.0 25 7891.5 26 9215.0 27 11806.0 28 14397.0 29 16723.5 30 19050.0 31 20754.0 32 22458.0 33 25906.5 34 29355.0 35 34084.5 36 38814.0 37 45338.0 38 51862.0 39 54389.5 40 56917.0 41 61410.5 42 65904.0 43 66364.0 44 66824.0 45 73282.5 46 79741.0 47 85176.0 48 90611.0 49 93058.0 50 95505.0 51 91022.5 52 86540.0 53 85368.5 54 84197.0 55 85792.5 56 87388.0 57 86714.5 58 86041.0 59 78459.0 60 70877.0 61 62968.0 62 55059.0 63 48433.5 64 41808.0 65 36108.5 66 30409.0 67 26747.0 68 23085.0 69 21353.0 70 19621.0 71 15540.0 72 11459.0 73 10368.0 74 9277.0 75 6935.5 76 4594.0 77 4141.5 78 3689.0 79 3242.5 80 2796.0 81 2211.5 82 1627.0 83 1401.5 84 1176.0 85 969.5 86 763.0 87 581.5 88 400.0 89 259.5 90 119.0 91 77.0 92 35.0 93 24.0 94 13.0 95 8.5 96 4.0 97 3.5 98 3.0 99 5.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013092738673612053 2 0.003818715446470182 3 7.793296829530984E-4 4 2.337989048859295E-4 5 0.0 6 5.455307780671689E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.793296829530984E-5 47 0.0 48 0.0 49 0.0 50 7.793296829530984E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1283154.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.41269479465962 #Duplication Level Percentage of deduplicated Percentage of total 1 82.00773253970189 47.08284919103981 2 11.22099061519759 12.884546189681584 3 2.960198398110792 5.098589014871257 4 1.214257074353948 2.7885508324855817 5 0.6438131299920249 1.8481523368513324 6 0.4064769569550911 1.4002162482434786 7 0.26488431334735213 1.064540556667316 8 0.19317701533371404 0.8872650418158246 9 0.148207247649574 0.7658079728095374 >10 0.7621942453254901 8.153346292528607 >50 0.08457759304704128 3.450004446610549 >100 0.08286072491752138 9.872242653450623 >500 0.008585887208846028 3.2318797091341236 >1k 0.0020442588592490545 1.472009513810441 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1596 0.12438101739931451 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1504 0.117211184316146 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1451 0.11308073699649458 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1442 0.1123793402818368 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1392 0.1084826918670713 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1328 0.10349498189617147 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.793296829530984E-5 2 0.0 0.0 0.0 0.0 7.793296829530984E-5 3 0.0 0.0 0.0 0.0 7.793296829530984E-5 4 0.0 0.0 0.0 0.0 7.793296829530984E-5 5 0.0 0.0 0.0 0.0 7.793296829530984E-5 6 0.0 0.0 0.0 0.0 7.793296829530984E-5 7 0.0 0.0 0.0 7.793296829530984E-5 7.793296829530984E-5 8 0.0 0.0 0.0 7.793296829530984E-5 1.558659365906197E-4 9 0.0 0.0 0.0 2.3379890488592952E-4 1.558659365906197E-4 10 0.0 0.0 0.0 2.3379890488592952E-4 1.558659365906197E-4 11 0.0 0.0 0.0 2.3379890488592952E-4 1.558659365906197E-4 12 0.0 0.0 0.0 3.896648414765492E-4 3.896648414765492E-4 13 0.0 0.0 0.0 3.896648414765492E-4 3.896648414765492E-4 14 0.0 0.0 0.0 3.896648414765492E-4 3.896648414765492E-4 15 0.0 0.0 0.0 3.896648414765492E-4 3.896648414765492E-4 16 0.0 0.0 0.0 3.896648414765492E-4 4.6759780977185904E-4 17 0.0 0.0 0.0 3.896648414765492E-4 4.6759780977185904E-4 18 0.0 0.0 0.0 3.896648414765492E-4 5.455307780671689E-4 19 0.0 0.0 0.0 4.6759780977185904E-4 5.455307780671689E-4 20 0.0 0.0 0.0 4.6759780977185904E-4 6.234637463624788E-4 21 0.0 0.0 0.0 6.234637463624788E-4 7.013967146577885E-4 22 0.0 0.0 0.0 7.013967146577885E-4 7.793296829530984E-4 23 0.0 0.0 0.0 0.0010910615561343377 7.793296829530984E-4 24 0.0 0.0 0.0 0.002026257175678056 7.793296829530984E-4 25 0.0 0.0 0.0 0.0025717879537452246 7.793296829530984E-4 26 0.0 0.0 0.0 0.003351117636698323 8.572626512484082E-4 27 0.0 0.0 0.0 0.0047539110660139005 0.001013128587839028 28 0.0 0.0 0.0 0.010598883688162138 0.001013128587839028 29 0.0 0.0 0.0 0.02275642674223047 0.001013128587839028 30 0.0 0.0 0.0 0.04800670846991086 0.001013128587839028 31 0.0 0.0 0.0 0.10279358518151367 0.001013128587839028 32 0.0 0.0 0.0 0.1757388435059237 0.001013128587839028 33 0.0 0.0 0.0 0.24759304027419934 0.001013128587839028 34 0.0 0.0 0.0 0.32989025479404654 0.0010910615561343377 35 0.0 0.0 0.0 0.42434501236796207 0.0010910615561343377 36 0.0 0.0 0.0 0.5570648573748748 0.0010910615561343377 37 0.0 0.0 0.0 0.7459743725227058 0.0010910615561343377 38 0.0 0.0 0.0 0.9983992568312143 0.0012469274927249575 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATACG 90 1.0017546E-5 19.556196 2 CGCAATA 450 0.0 18.577663 36 TACCGTC 345 0.0 18.49264 7 TAGGACG 335 0.0 18.387945 4 ATAACCG 60 0.007412609 18.333221 4 ACCGTCG 360 0.0 18.33322 8 ATACCGT 360 0.0 18.33322 6 CGTCGTA 365 0.0 17.479345 10 ACACGCT 440 0.0 16.999895 9 TATACCA 105 3.7748356E-5 16.7618 5 CTAGCGG 500 0.0 16.719896 29 TAACGCC 620 0.0 16.677317 4 CAATACG 490 0.0 16.61214 38 ATCGTTT 610 0.0 16.590061 29 GTCTATA 120 6.3956704E-6 16.503115 1 TTAGGAC 375 0.0 16.427204 3 TCTAGCG 510 0.0 16.392056 28 AATAACG 645 0.0 16.37263 2 CCGTCGT 390 0.0 16.358873 9 CTTACAC 135 1.0852E-6 16.296831 3 >>END_MODULE