##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062423_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2794822 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.310441953011676 32.0 32.0 32.0 32.0 32.0 2 31.45568698113869 32.0 32.0 32.0 32.0 32.0 3 31.52938398223572 32.0 32.0 32.0 32.0 32.0 4 31.621261389813018 32.0 32.0 32.0 32.0 32.0 5 31.565886127989547 32.0 32.0 32.0 32.0 32.0 6 35.166894707426806 36.0 36.0 36.0 36.0 36.0 7 35.17857308980679 36.0 36.0 36.0 36.0 36.0 8 35.124098064205874 36.0 36.0 36.0 36.0 36.0 9 35.237430147608684 36.0 36.0 36.0 36.0 36.0 10 35.1295145093319 36.0 36.0 36.0 36.0 36.0 11 35.25742533871567 36.0 36.0 36.0 36.0 36.0 12 35.16456039060806 36.0 36.0 36.0 36.0 36.0 13 35.209521035686706 36.0 36.0 36.0 36.0 36.0 14 35.17343179637201 36.0 36.0 36.0 36.0 36.0 15 35.1316488134128 36.0 36.0 36.0 36.0 36.0 16 35.145913407007676 36.0 36.0 36.0 36.0 36.0 17 35.12940323211997 36.0 36.0 36.0 36.0 36.0 18 35.14027726989411 36.0 36.0 36.0 36.0 36.0 19 35.11861005817186 36.0 36.0 36.0 36.0 36.0 20 35.10730307690436 36.0 36.0 36.0 36.0 36.0 21 35.100046443029285 36.0 36.0 36.0 36.0 36.0 22 35.081556177817404 36.0 36.0 36.0 36.0 36.0 23 35.04620008000509 36.0 36.0 36.0 36.0 36.0 24 35.022541328213386 36.0 36.0 36.0 36.0 36.0 25 34.997634911990815 36.0 36.0 36.0 36.0 36.0 26 34.96080823751924 36.0 36.0 36.0 36.0 36.0 27 34.94428553947264 36.0 36.0 36.0 36.0 36.0 28 34.929292098029855 36.0 36.0 36.0 32.0 36.0 29 34.9046543930168 36.0 36.0 36.0 32.0 36.0 30 34.891839265613335 36.0 36.0 36.0 32.0 36.0 31 34.884020520805976 36.0 36.0 36.0 32.0 36.0 32 34.842370641135645 36.0 36.0 36.0 32.0 36.0 33 34.83196890535426 36.0 36.0 36.0 32.0 36.0 34 34.80907621308262 36.0 36.0 36.0 32.0 36.0 35 34.7818533702683 36.0 36.0 36.0 32.0 36.0 36 34.751327991550085 36.0 36.0 36.0 32.0 36.0 37 34.73512087710774 36.0 36.0 36.0 32.0 36.0 38 34.69569332143514 36.0 36.0 36.0 32.0 36.0 39 34.668597141427966 36.0 36.0 36.0 32.0 36.0 40 34.658083412825576 36.0 36.0 36.0 32.0 36.0 41 34.63203989377499 36.0 36.0 36.0 32.0 36.0 42 34.59392512295953 36.0 36.0 36.0 32.0 36.0 43 34.59128667228181 36.0 36.0 36.0 32.0 36.0 44 34.55004898344152 36.0 36.0 36.0 32.0 36.0 45 34.502103890695004 36.0 36.0 36.0 32.0 36.0 46 34.504193827012955 36.0 36.0 36.0 32.0 36.0 47 34.468998383439086 36.0 36.0 36.0 32.0 36.0 48 34.43242968604083 36.0 36.0 36.0 32.0 36.0 49 34.421358497965166 36.0 36.0 36.0 32.0 36.0 50 33.91054170891742 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 19.0 21 63.0 22 210.0 23 659.0 24 1750.0 25 3951.0 26 8468.0 27 15833.0 28 26999.0 29 41922.0 30 60169.0 31 87013.0 32 128711.0 33 209822.0 34 464917.0 35 1744310.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.5207292861018 18.209034914063967 11.848644648375824 26.42159115145841 2 15.906414585561501 20.625904163904003 37.16991643852723 26.297764812007262 3 18.494560097265968 24.50226509055532 28.7104924089679 28.292682403210804 4 12.395668407390113 15.938693616572117 36.1090090041738 35.556628971863965 5 14.21933640830665 36.845758637136335 33.662298945084494 15.27260600947252 6 34.14902676399027 35.4842206955775 16.8466795477315 13.52007299270073 7 29.800012236919642 30.600385498749294 21.12900969328626 18.4705925710448 8 27.90431734114015 33.243762930161566 19.7300937233212 19.121826005377088 9 27.455523106659385 14.232212284002344 18.837586078827204 39.47467853051106 10 15.954432876226107 26.840385541547906 31.756405237972224 25.448776344253766 11 37.185516644709395 21.079589326261207 22.69089051109516 19.04400351793424 12 24.682072776012213 23.751709411189694 29.039845829179818 22.526371983618276 13 29.662890874624576 19.67967906363983 25.360219720611905 25.297210341123694 14 23.3804872009738 20.01558596576097 25.211408812439572 31.392518020825655 15 24.969783406599777 27.67095722017359 22.53789328980522 24.821366083421413 16 25.409704088489356 25.74707798922436 24.5472162448986 24.296001677387682 17 23.74931212077191 26.008060620676382 25.771265576126133 24.47136168242557 18 24.587361914282912 24.76544123382455 27.205059928682402 23.442136923210136 19 25.524845589450777 25.17773940522867 25.53228792388209 23.76512708143846 20 25.495899202167436 24.533118746023895 25.661562704172212 24.309419347636453 21 26.352805294934704 24.364950612239348 24.55934581880349 24.72289827402246 22 25.39986446364026 25.024169696674782 25.046496699968728 24.52946913971623 23 24.025072079724577 24.633482919484674 25.853131254870615 25.48831374592013 24 24.633912284932634 25.2655446393366 25.60449288004746 24.496050195683303 25 24.758392484387198 24.729267194833877 25.76003051357117 24.75230980720776 26 23.99891656785298 25.481479679206764 26.25945409045728 24.260149662482977 27 24.931033174921335 25.270410781080155 25.315601494478003 24.482954549520507 28 24.016484770765363 25.05855471296562 25.93116842503744 24.99379209123157 29 24.1532376659408 25.23387893754951 25.749260596918155 24.863622799591532 30 24.314070806656023 25.1936974877112 26.115437763120514 24.376793942512258 31 24.76994957102814 24.912999826106994 25.209190424291776 25.107860178573087 32 24.28558956527464 25.334350452372277 25.31878595488371 25.06127402746937 33 23.95050561359543 24.886558070603424 26.01521671147572 25.14771960432543 34 24.558308185637586 25.08610566254309 26.261815600421063 24.093770551398265 35 25.276135653719628 25.014258510917692 25.737560388461233 23.97204544690145 36 24.15398905547473 25.40651962808365 25.679846516164535 24.759644800277083 37 25.05483354574996 25.206363768426037 25.15423164695283 24.584571038871168 38 24.32988576732257 25.253236163161734 25.565349063375052 24.85152900614064 39 24.79506744973383 24.724758857630288 25.325190656149122 25.15498303648676 40 25.33206050331649 24.91654209105267 25.765469142578667 23.985928263052173 41 24.239826364612846 24.930031322209427 26.351875003130793 24.478267310046935 42 25.291091883490253 25.578874074985812 25.59826708105203 23.5317669604719 43 24.235604271041232 24.737782942885094 25.919539777488517 25.10707300858516 44 23.915190305500673 25.05179220716024 25.901363306858183 25.131654180480904 45 23.957196558492814 25.453749827359314 25.814953510456125 24.774100103691758 46 23.9535454544804 24.733632028990797 26.021014606317834 25.291807910210967 47 24.50792930641021 24.654557606888737 26.183277503898278 24.65423558280277 48 24.512258741343814 25.694122917309226 25.25967664488114 24.53394169646582 49 23.862235233585537 25.286225741746705 25.877640865858364 24.973898158809398 50 23.538994612179238 26.145135539937787 25.28329174451897 25.032578103364006 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 65.0 1 80.5 2 96.0 3 317.0 4 538.0 5 599.0 6 660.0 7 578.5 8 497.0 9 681.0 10 865.0 11 1316.5 12 1768.0 13 3005.0 14 4242.0 15 5459.0 16 6676.0 17 7791.0 18 8906.0 19 9556.5 20 10207.0 21 11884.5 22 13562.0 23 14541.0 24 15520.0 25 18398.5 26 21277.0 27 26801.0 28 32325.0 29 37519.5 30 42714.0 31 47442.0 32 52170.0 33 61541.5 34 70913.0 35 81879.5 36 92846.0 37 106217.0 38 119588.0 39 124340.0 40 129092.0 41 138112.5 42 147133.0 43 147506.0 44 147879.0 45 163274.5 46 178670.0 47 190460.0 48 202250.0 49 205219.0 50 208188.0 51 199320.0 52 190452.0 53 187130.0 54 183808.0 55 184902.0 56 185996.0 57 182325.5 58 178655.0 59 163452.5 60 148250.0 61 130227.5 62 112205.0 63 98043.5 64 83882.0 65 71189.5 66 58497.0 67 52102.5 68 45708.0 69 41381.0 70 37054.0 71 29146.5 72 21239.0 73 18744.5 74 16250.0 75 11905.0 76 7560.0 77 6771.5 78 5983.0 79 5172.5 80 4362.0 81 3450.5 82 2539.0 83 2185.5 84 1832.0 85 1469.0 86 1106.0 87 834.5 88 563.0 89 349.0 90 135.0 91 89.5 92 44.0 93 35.5 94 27.0 95 21.5 96 16.0 97 12.5 98 9.0 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014956229770625822 2 0.004043191301628511 3 3.9358499396383744E-4 4 2.5046317797698745E-4 5 3.578045399671249E-5 6 7.871699879276749E-4 7 3.578045399671249E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.4312181598684996E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2794822.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.92228628904065 #Duplication Level Percentage of deduplicated Percentage of total 1 75.71408558335175 37.7982025660501 2 14.084274003704245 14.062383179724321 3 4.50841478960597 6.752111215093626 4 1.9250314070078465 3.844078760641618 5 0.9648574769106047 2.4083945595226317 6 0.5710732288926412 1.7105568734871162 7 0.39852732843389405 1.392677676885837 8 0.2780862100401427 1.1106159512526637 9 0.21449099337981603 0.9637092700135109 >10 1.1493927374473163 10.38621381390556 >50 0.09304353638078773 3.224143239828123 >100 0.08248068614378055 8.810941908677188 >500 0.011694253464902219 4.024174486761179 >1k 0.004547765236339784 3.511796498156679 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.156090799342498E-5 2 0.0 0.0 0.0 0.0 7.156090799342498E-5 3 0.0 0.0 0.0 7.156090799342498E-5 7.156090799342498E-5 4 0.0 0.0 0.0 1.0734136199013748E-4 7.156090799342498E-5 5 0.0 0.0 0.0 1.4312181598684996E-4 7.156090799342498E-5 6 0.0 0.0 0.0 1.4312181598684996E-4 1.7890226998356246E-4 7 0.0 0.0 0.0 1.4312181598684996E-4 2.1468272398027496E-4 8 0.0 0.0 0.0 1.4312181598684996E-4 2.1468272398027496E-4 9 0.0 0.0 0.0 2.5046317797698745E-4 2.1468272398027496E-4 10 0.0 3.578045399671249E-5 0.0 2.862436319736999E-4 2.1468272398027496E-4 11 0.0 3.578045399671249E-5 0.0 2.862436319736999E-4 2.1468272398027496E-4 12 0.0 3.578045399671249E-5 0.0 2.862436319736999E-4 6.798286259375373E-4 13 0.0 3.578045399671249E-5 0.0 3.2202408597041245E-4 8.587308959210998E-4 14 0.0 3.578045399671249E-5 0.0 3.578045399671249E-4 8.587308959210998E-4 15 0.0 3.578045399671249E-5 0.0 4.293654479605499E-4 0.0010376331659046622 16 0.0 3.578045399671249E-5 0.0 4.651459019572624E-4 0.0011091940738980873 17 0.0 3.578045399671249E-5 0.0 4.651459019572624E-4 0.0011091940738980873 18 0.0 3.578045399671249E-5 0.0 5.724872639473998E-4 0.0012165354358882247 19 0.0 7.156090799342498E-5 0.0 6.082677179441124E-4 0.0012165354358882247 20 0.0 7.156090799342498E-5 0.0 7.513895339309624E-4 0.0014312181598684997 21 0.0 7.156090799342498E-5 0.0 9.660722579112373E-4 0.0014312181598684997 22 0.0 7.156090799342498E-5 0.0 0.0015743399758553496 0.001466998613865212 23 0.0 7.156090799342498E-5 0.0 0.002540412233766587 0.001466998613865212 24 0.0 7.156090799342498E-5 0.0 0.004472556749589062 0.001466998613865212 25 0.0 7.156090799342498E-5 0.0 0.005545970369490436 0.001466998613865212 26 0.0 7.156090799342498E-5 0.0 0.0072992126153293485 0.0015027790678619247 27 0.0 7.156090799342498E-5 0.0 0.009374478947138673 0.0015027790678619247 28 0.0 7.156090799342498E-5 3.578045399671249E-5 0.016101204298520622 0.0015027790678619247 29 0.0 7.156090799342498E-5 3.578045399671249E-5 0.03270333495299522 0.0015027790678619247 30 0.0 7.156090799342498E-5 3.578045399671249E-5 0.06039740634645069 0.0015027790678619247 31 0.0 7.156090799342498E-5 3.578045399671249E-5 0.1185764245451052 0.0015743399758553496 32 0.0 7.156090799342498E-5 3.578045399671249E-5 0.18745379848877675 0.0015743399758553496 33 0.0 7.156090799342498E-5 1.0734136199013748E-4 0.25439902791662583 0.0015743399758553496 34 0.0 7.156090799342498E-5 1.4312181598684996E-4 0.3327224417154295 0.0017174617918421997 35 0.0 7.156090799342498E-5 1.4312181598684996E-4 0.41852397039954603 0.0017174617918421997 36 0.0 7.156090799342498E-5 1.4312181598684996E-4 0.5441133639280069 0.0017174617918421997 37 0.0 7.156090799342498E-5 1.4312181598684996E-4 0.7239459257154839 0.0017174617918421997 38 0.0 7.156090799342498E-5 1.4312181598684996E-4 0.9712604237407606 0.0018248031538323371 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 1285 0.0 19.51773 4 TGTAGGA 1790 0.0 19.173746 2 AGGACGT 1420 0.0 18.126968 5 TTAGGAC 1080 0.0 17.722425 3 GGACGTG 1465 0.0 17.570166 6 GTAGGAC 1905 0.0 17.554007 3 CTGTAGG 1890 0.0 17.463327 1 ATACCGT 685 0.0 17.02209 6 AGCGAAA 915 0.0 16.830492 17 GTCCTAA 995 0.0 16.80692 1 GAGCGAA 945 0.0 16.528992 16 TAGGACA 870 0.0 16.436968 4 GACGTGA 845 0.0 16.40226 7 GCGAAAG 930 0.0 16.322475 18 ACCGTCG 705 0.0 16.226845 8 CACGCGA 110 5.625793E-5 15.999895 10 TACCGTC 690 0.0 15.623087 7 CGCAATA 835 0.0 15.544809 36 CGCACGA 85 0.0029813785 15.52931 28 GTACTAA 200 1.2751116E-9 15.402655 1 >>END_MODULE