##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062422_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 747623 Sequences flagged as poor quality 0 Sequence length 25 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.204770318730162 32.0 32.0 32.0 32.0 32.0 2 31.04968814496076 32.0 32.0 32.0 32.0 32.0 3 31.02653476417927 32.0 32.0 32.0 32.0 32.0 4 31.041733601026184 32.0 32.0 32.0 32.0 32.0 5 30.999699046177017 32.0 32.0 32.0 32.0 32.0 6 34.64895274757465 36.0 36.0 36.0 32.0 36.0 7 34.500145126621305 36.0 36.0 36.0 32.0 36.0 8 34.49902691597236 36.0 36.0 36.0 32.0 36.0 9 34.55823322717466 36.0 36.0 36.0 32.0 36.0 10 34.379375701389606 36.0 36.0 36.0 32.0 36.0 11 34.594617875587026 36.0 36.0 36.0 32.0 36.0 12 34.44051480492173 36.0 36.0 36.0 32.0 36.0 13 34.488315635019255 36.0 36.0 36.0 32.0 36.0 14 34.44952603116811 36.0 36.0 36.0 32.0 36.0 15 34.421012997192435 36.0 36.0 36.0 32.0 36.0 16 34.44062181072546 36.0 36.0 36.0 32.0 36.0 17 34.40108717896587 36.0 36.0 36.0 32.0 36.0 18 34.44052283035701 36.0 36.0 36.0 32.0 36.0 19 34.3433000322355 36.0 36.0 36.0 32.0 36.0 20 34.30903677388202 36.0 36.0 36.0 32.0 36.0 21 34.21663726236352 36.0 36.0 36.0 32.0 36.0 22 34.172065332393466 36.0 36.0 36.0 32.0 36.0 23 34.13569539727911 36.0 36.0 36.0 32.0 36.0 24 34.093648804277024 36.0 36.0 36.0 32.0 36.0 25 33.64506576175425 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 4.0 4 22.0 5 79.0 6 117.0 7 21.0 8 105.0 9 151.0 10 76.0 11 32.0 12 73.0 13 43.0 14 176.0 15 181.0 16 280.0 17 390.0 18 509.0 19 719.0 20 1015.0 21 1392.0 22 2008.0 23 2783.0 24 3759.0 25 4840.0 26 6913.0 27 8859.0 28 12296.0 29 16289.0 30 21909.0 31 30753.0 32 45272.0 33 66960.0 34 159276.0 35 360321.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.34163594433059 19.133549861147525 12.505417654329577 25.019396540192307 2 10.669011965034544 21.43767681699316 47.889298350042466 20.00401286792983 3 20.901184332672546 26.62581561649772 29.622228107769725 22.850771943060003 4 10.5714908742597 17.843320610942325 39.80048187226505 31.784706642532917 5 9.88874393711323 40.840809499916375 37.39407927747115 11.876367285499247 6 29.236930916448323 38.64121140428584 19.74112067742721 12.380737001838623 7 24.764196716220937 32.1373742349025 23.361088543179406 19.73734050569716 8 21.913417861833253 43.846916932073306 21.350474652829377 12.889190553264065 9 26.23395715123456 15.621376719426541 20.485576498247436 37.65908963109146 10 14.151719113672826 30.932127351276645 36.651391012987425 18.264762522063098 11 33.907323259716385 20.6530575074695 27.865295840514904 17.574323392299217 12 23.9552485692052 23.87515352665973 35.9929441357169 16.176653768418177 13 32.17151642417879 23.113978229659946 26.1439606591099 18.570544687051363 14 19.212483058247486 25.54160037285248 27.3139889322812 27.93192763661883 15 20.807538670234063 37.72990895371088 24.60767338499631 16.85487899105874 16 18.480527184807947 27.77067300159757 36.0737533796044 17.675046433990083 17 18.078160845651013 30.542620709235813 32.98928204571905 18.389936399394127 18 18.55183923194788 27.011743654033666 39.09881384808255 15.337603265935904 19 23.279075405260247 27.296385438891857 27.238256727996475 22.18628242785142 20 21.865290664038227 29.328221088945554 32.5393998157235 16.26708843129272 21 20.163533721296215 28.23923336034341 26.20356666912213 25.39366624923825 22 20.35591946531701 33.938946575909526 27.915858966509973 17.789274992263493 23 18.759585671288328 32.36872737111835 29.24679562310714 19.62489133448618 24 22.320327139418666 29.556532140001313 30.835810140196866 17.287330580383152 25 21.29822225734342 30.07201779751708 30.68919840186654 17.94056154327296 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 130.0 1 130.0 2 356.0 3 582.0 4 582.0 5 582.0 6 1760.0 7 2938.0 8 2938.0 9 2938.0 10 2907.5 11 2877.0 12 2877.0 13 2877.0 14 2856.5 15 2836.0 16 2836.0 17 2836.0 18 5192.0 19 7548.0 20 7548.0 21 7548.0 22 14672.5 23 21797.0 24 21797.0 25 21797.0 26 37022.0 27 52247.0 28 52247.0 29 52247.0 30 74669.0 31 97091.0 32 97091.0 33 97091.0 34 97649.5 35 98208.0 36 98208.0 37 98208.0 38 95687.5 39 93167.0 40 93167.0 41 93167.0 42 95188.5 43 97210.0 44 97210.0 45 97210.0 46 110055.5 47 122901.0 48 122901.0 49 122901.0 50 97974.0 51 73047.0 52 73047.0 53 73047.0 54 52835.0 55 32623.0 56 32623.0 57 32623.0 58 26231.5 59 19840.0 60 19840.0 61 19840.0 62 15460.0 63 11080.0 64 11080.0 65 11080.0 66 8531.0 67 5982.0 68 5982.0 69 5982.0 70 4429.0 71 2876.0 72 2876.0 73 2876.0 74 2174.5 75 1473.0 76 1473.0 77 1473.0 78 996.0 79 519.0 80 519.0 81 519.0 82 360.5 83 202.0 84 202.0 85 202.0 86 132.0 87 62.0 88 62.0 89 62.0 90 50.5 91 39.0 92 39.0 93 39.0 94 37.0 95 35.0 96 35.0 97 35.0 98 174.0 99 313.0 100 313.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008961736062159671 2 0.0037452031304547884 3 0.0038789603851138877 4 0.01631838506841015 5 0.0331717991554567 6 0.04347110776420736 7 0.0663435983109134 8 0.08774475905636932 9 0.0959039515905744 10 0.12051528644784872 11 0.12305667428637161 12 0.13509482720569058 13 0.12292291703171251 14 0.12666812016216727 15 0.11503123900682563 16 0.11556626802546202 17 0.1246617613422808 18 0.13469355544171327 19 0.13429228367773596 20 0.12292291703171251 21 0.13215216760319037 22 0.15542592991387372 23 0.14258523346660015 24 0.13776997229887256 25 0.13402476916841777 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 747623.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.89607494691395 #Duplication Level Percentage of deduplicated Percentage of total 1 77.94346932328989 33.43468901714331 2 13.075018139718415 11.21733916107241 3 3.8639037287176126 4.97238911804193 4 1.6135732266191596 2.7686383224555695 5 0.8242404884221497 1.7678340882818746 6 0.4917025297345282 1.2655265140247702 7 0.32415974469638825 0.9733626492288134 8 0.24068298531241464 0.8259484301126663 9 0.1790462798693862 0.691234437621899 >10 1.1757934497379567 9.804356329770954 >50 0.12654958791997323 3.852210619765075 >100 0.11311345105351829 9.803835303700467 >500 0.015935872938478743 4.960022495842824 >1k 0.011873787679650829 10.966334293200283 >5k 9.374042904987496E-4 2.696279219737177 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 7930 1.0606950294466595 No Hit TCCATGTACTCTGCGTTGATACCAC 6812 0.9111544187377862 No Hit GTCCTACAGTGGACATTTCTAAATT 5374 0.7188114865380011 No Hit GTCCTAAAGTGTGTATTTCTCATTT 4990 0.6674487007489069 No Hit CTGTAGGACGTGGAATATGGCAAGA 4871 0.651531587444474 No Hit CTTTAGGACGTGAAATATGGCGAGG 4158 0.556162664872536 No Hit GTCCTACAGTGTGCATTTCTCATTT 3899 0.5215195359158292 No Hit GAGTACATGGAAGCAGTGGTATCAA 3569 0.4773796418783264 No Hit CATGTACTCTGCGTTGATACCACTG 3085 0.4126411306233222 No Hit CTGTAGGACCTGGAATATGGCGAGA 3066 0.41009974278479927 No Hit TTGTAGAACAGTGTATATCAATGAG 3013 0.40301060828786706 No Hit GATATACACTGTTCTACAAATCCCG 2732 0.36542481972866003 No Hit GTGTATATCAATGAGTTACAATGAA 2560 0.3424185719272949 No Hit CTGAAGGACCTGGAATATGGCGAGA 2312 0.3092467727718382 No Hit GTATCAACGCAGAGTACTTTTTTTT 2217 0.29653983357922375 No Hit GCTTCCATGTACTCTGCGTTGATAC 2215 0.29627231906990553 No Hit GTGTATATCAATGAGTTACAATGAG 2204 0.29480098926865544 No Hit GTCCTTCAGTGTGCATTTCTCATTT 2049 0.274068614796495 No Hit CCCATGTACTCTGCGTTGATACCAC 1986 0.26564190775297175 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1974 0.2640368206970626 No Hit GTTCTACAGTGTGGTTTTTATCATT 1941 0.2596228312933123 No Hit GCGTTGATACCACTGCTTCCATGTA 1898 0.253871269342971 No Hit GTACATGGGAAGCAGTGGTATCAAC 1842 0.24638086308206142 No Hit CATGGAAGCAGTGGTATCAACGCAG 1834 0.2453108050447886 No Hit ATTTAGAAATGTCCACTGTAGGACG 1830 0.24477577602615222 No Hit TTTCTAAATTTTCCACCTTTTTCAG 1619 0.21655299529308222 No Hit GATATACACTGTTCTACAATGCCGG 1593 0.21307530667194563 No Hit TATCAACGCAGAGTACTTTTTTTTT 1541 0.20611992942967242 No Hit GTATCAACGCAGAGTACATGGAAGC 1518 0.20304351257251313 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1427 0.1908716023985351 No Hit GAATATGGCAAGAAAACTGAAAATC 1418 0.18966778710660318 No Hit CTGTAGAACATATTAGATGAGTGAG 1405 0.1879289427960349 No Hit ACTCTGCGTTGATACCACTGCTTCC 1378 0.18431749692023922 No Hit CTGTAGGACATGGAATATGGCAAGA 1321 0.17669333340467053 No Hit ATGTTCTACAGTGTGGTTTTTATCA 1263 0.16893541263444276 No Hit GTTCTACAAATCCCGTTTCCAACGA 1236 0.16532396675864705 No Hit GGAATATGGCGAGAAAACTGAAAAT 1219 0.16305009342944238 No Hit CAGTGGTATCAACGCAGAGTACATG 1216 0.16264882166546507 No Hit ACGCAGAGTACATGGAAGCAGTGGT 1198 0.1602411910816013 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 1128 0.15087818325546432 No Hit ACCTGGAATATGGCGAGAAAACTGA 1091 0.14592916483307763 No Hit GACCTGGAATATGGCGAGAAAACTG 987 0.1320184103485313 No Hit GTATCAACGCAGAGTACATGGGAAG 968 0.1294770225100084 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 966 0.1292095080006902 No Hit GTCCACTGTAGGACGTGGAATATGG 961 0.12854072172739467 No Hit GTAGAACATATTAGATGAGTGAGTT 956 0.1278719354540992 No Hit ACAGTGGACATTTCTAAATTTTCCA 946 0.1265343629075082 No Hit GTAGAACAGTGTATATCAATGAGTT 941 0.1258655766342127 No Hit TATCAACGCAGAGTACATGGAAGCA 930 0.1243942468329626 No Hit TTCCAGGTCCTTCAGTGTGCATTTC 926 0.1238592178143262 No Hit GAAATATGGCGAGGAAAACTGAAAA 906 0.12118407272114422 No Hit CATCTAATATGTTCTACAGTGTGGT 902 0.12064904370250781 No Hit GCCATATTCCACGTCCTACAGTGGA 901 0.12051528644784872 No Hit GTACATGGGGTGGTATCAACGCAAA 898 0.12011401468387142 No Hit CCATATTCCAGGTCCTTCAGTGTGC 879 0.11757262684534853 No Hit CCATATTTCACGTCCTAAAGTGTGT 843 0.11275736567762093 No Hit CTACAGTGGACATTTCTAAATTTTC 820 0.10968094882046166 No Hit GGTATCAACGCAGAGTACTTTTTTT 795 0.10633701745398416 No Hit GTGTATTTCTCATTTTCCGTGATTT 792 0.10593574569000687 No Hit ATACACACTTTAGGACGTGAAATAT 787 0.10526695941671137 No Hit CCACTGTAGGACGTGGAATATGGCA 782 0.10459817314341588 No Hit CACTTTAGGACGTGAAATATGGCGA 779 0.10419690137943856 No Hit TATTAGATGAGTGAGTTACACTGAA 752 0.10058545550364287 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGTACG 35 0.0021668905 16.287838 17 GAGGTCG 35 0.0021668905 16.287838 17 TATGACT 50 8.7095126E-5 15.198929 4 TAGAACC 45 6.760122E-4 14.776736 4 TGTGCAA 80 1.283297E-7 14.251859 10 TCGAGGT 40 0.00527114 14.251859 15 CCCTTGG 40 0.005304025 14.238505 1 TTGTAGA 500 0.0 13.858812 1 TAGGACC 1160 0.0 13.839542 4 GCAATTC 70 7.2457096E-6 13.572289 13 TAGAAAT 525 0.0 13.389531 4 AAATGTC 575 0.0 13.21823 7 TGGCGAA 80 1.9925155E-6 13.064204 18 CTAGGAC 175 0.0 13.0259075 3 TCCAACG 420 0.0 12.894539 18 CCAACGA 280 0.0 12.894539 19 AATGTCC 620 0.0 12.718549 8 AACTTTT 105 1.983426E-8 12.668319 15 GGCGAAA 75 1.4741689E-5 12.668319 19 TGCAATT 75 1.4741689E-5 12.668319 12 >>END_MODULE