##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062422_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 747623 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23185616279863 32.0 32.0 32.0 32.0 32.0 2 31.51831738723929 32.0 32.0 32.0 32.0 32.0 3 31.589458858274824 32.0 32.0 32.0 32.0 32.0 4 31.673814208498133 32.0 32.0 32.0 32.0 32.0 5 31.648098038717375 32.0 32.0 32.0 32.0 32.0 6 35.268005398442796 36.0 36.0 36.0 36.0 36.0 7 35.287537970340665 36.0 36.0 36.0 36.0 36.0 8 35.236127031939894 36.0 36.0 36.0 36.0 36.0 9 35.33437708577719 36.0 36.0 36.0 36.0 36.0 10 35.26272332445631 36.0 36.0 36.0 36.0 36.0 11 35.33936221865834 36.0 36.0 36.0 36.0 36.0 12 35.283735251590706 36.0 36.0 36.0 36.0 36.0 13 35.2932721438479 36.0 36.0 36.0 36.0 36.0 14 35.27104971355884 36.0 36.0 36.0 36.0 36.0 15 35.233514752756406 36.0 36.0 36.0 36.0 36.0 16 35.258178252943 36.0 36.0 36.0 36.0 36.0 17 35.26760011396118 36.0 36.0 36.0 36.0 36.0 18 35.267782023827515 36.0 36.0 36.0 36.0 36.0 19 35.20478636960072 36.0 36.0 36.0 36.0 36.0 20 35.17699428722765 36.0 36.0 36.0 36.0 36.0 21 35.119061345089705 36.0 36.0 36.0 36.0 36.0 22 35.0809271517864 36.0 36.0 36.0 36.0 36.0 23 35.038657184169026 36.0 36.0 36.0 36.0 36.0 24 35.03190244280874 36.0 36.0 36.0 36.0 36.0 25 34.97393338621203 36.0 36.0 36.0 36.0 36.0 26 34.93809580497122 36.0 36.0 36.0 36.0 36.0 27 34.87315398268914 36.0 36.0 36.0 36.0 36.0 28 34.806228540320454 36.0 36.0 36.0 36.0 36.0 29 34.75603211779199 36.0 36.0 36.0 32.0 36.0 30 34.68946915758343 36.0 36.0 36.0 32.0 36.0 31 34.66886519007575 36.0 36.0 36.0 32.0 36.0 32 34.6237622438047 36.0 36.0 36.0 32.0 36.0 33 34.61827150850094 36.0 36.0 36.0 32.0 36.0 34 34.57612192241277 36.0 36.0 36.0 32.0 36.0 35 34.50118308291746 36.0 36.0 36.0 32.0 36.0 36 34.413997429185564 36.0 36.0 36.0 32.0 36.0 37 34.28564664275979 36.0 36.0 36.0 32.0 36.0 38 34.20253389743226 36.0 36.0 36.0 32.0 36.0 39 33.93929962026316 36.0 36.0 36.0 32.0 36.0 40 33.956499465639766 36.0 36.0 36.0 32.0 36.0 41 33.95157719866831 36.0 36.0 36.0 32.0 36.0 42 33.81771828849567 36.0 36.0 36.0 32.0 36.0 43 33.84185879781655 36.0 36.0 36.0 32.0 36.0 44 33.7752931624629 36.0 36.0 36.0 32.0 36.0 45 33.604376804886954 36.0 36.0 36.0 21.0 36.0 46 33.57715185327364 36.0 36.0 36.0 21.0 36.0 47 33.51754293273481 36.0 36.0 36.0 21.0 36.0 48 33.47531041714875 36.0 36.0 36.0 21.0 36.0 49 33.46407614532993 36.0 36.0 36.0 21.0 36.0 50 32.9888152183654 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 6.0 21 14.0 22 67.0 23 205.0 24 605.0 25 1515.0 26 3393.0 27 6604.0 28 11165.0 29 16019.0 30 22253.0 31 29614.0 32 42984.0 33 58756.0 34 116689.0 35 437734.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.801974873276066 19.92224655547692 12.903031608407325 25.372746962839688 2 10.364449152882447 22.032547077691902 47.317929250368515 20.285074519057137 3 20.637835697718902 26.913600723360197 29.884620837803062 22.563942741117838 4 10.505350987601974 18.328453396716775 39.98855031774206 31.17764529793919 5 9.742075885840858 41.21061016046858 37.071090643278765 11.976223310411799 6 29.607995516432833 38.653244500206654 19.39717957943819 12.341580403922318 7 24.966861640158207 32.21824368699197 23.28499792007469 19.529896752775127 8 22.107934079074614 43.80322702752591 21.27516141156706 12.81367748183242 9 26.01377967237498 15.477051936604411 20.40921694490405 38.099951446116556 10 14.28741491366638 31.23058011858918 36.15859865199439 18.323406315750052 11 33.88017757613129 20.532942405463718 28.002081262882495 17.584798755522502 12 23.98749102154428 23.90442776640098 35.960504157844255 16.147577054210476 13 32.27241537512891 22.997553579812287 26.280357880910564 18.44967316414824 14 19.282445831655796 25.586559000993812 27.342390482903816 27.78860468444657 15 20.94384469177647 37.7469660510712 24.47195979791954 16.837229459232795 16 18.74099646479576 27.822043998111347 35.64764593919663 17.789313597896268 17 18.168649172109472 30.928021208550298 32.49177727276983 18.4115523465704 18 18.766677857690304 27.115136907238007 38.8215718350024 15.296613400069287 19 23.599193711268914 27.16970986713892 27.323798224506202 21.907298197085964 20 22.181634326391777 29.382054859200423 32.31133873623471 16.124972078173087 21 20.266765468692107 28.127010538734094 26.28276551149443 25.32345848107937 22 20.620954679029406 33.431154472240685 28.011444270708637 17.936446578021275 23 18.903244014697247 32.19523743919061 29.10062959539768 19.800888950714466 24 22.538899953586235 29.441041808505087 30.552163322958233 17.46789491495045 25 21.647942880301972 30.028637428222517 30.187674804012183 18.135744887463336 26 15.557172532145211 31.933340734568088 33.181295920537494 19.328190812749206 27 18.495150630732336 31.74915699490251 31.815500593213425 17.94019178115173 28 17.480200582379087 32.204466689762086 28.131959557156485 22.183373170702346 29 18.950727840101226 28.864681798179028 28.514371548226848 23.670218813492898 30 18.837034173640994 29.56142333769828 30.59924587659823 21.002296612062494 31 21.45479740457423 27.4575554791653 29.961090014619668 21.1265571016408 32 18.523774683229384 31.989786296034232 30.623990968710164 18.86244805202622 33 17.907822525524228 31.31377713098714 32.73441293272144 18.043987410767194 34 17.991688324195483 32.425299917204256 33.0491437529343 16.53386800566596 35 18.101904302034583 32.883284757157014 31.593864822243294 17.420946118565105 36 16.90664947440087 31.891207199350475 32.68345141869632 18.518691907552338 37 18.070337589935033 30.97443497591701 29.212049388528712 21.74317804561925 38 19.83419450712458 33.475963152551486 27.14121957189653 19.548622768427403 39 21.20212995052319 27.982953975466245 30.537985053964366 20.2769310200462 40 24.486405581422723 28.69266996868743 29.51367199778498 17.30725245210487 41 21.46696931474821 26.188199132450446 33.861050288715035 18.48378126408631 42 20.94651983686965 32.73989698016246 30.6546213800271 15.658961802940787 43 17.51083099369602 31.818309495561266 31.83008013397127 18.840779376771447 44 16.90932461949405 32.229613053638 31.434693689198966 19.426368637668986 45 17.804428167672746 32.5471527761987 30.212821167888094 19.435597888240462 46 18.54963945635556 27.643150740816537 31.344223878141463 22.46298592468644 47 22.844535280482276 28.127813082262048 30.320495757888665 18.707155879367008 48 17.529690766602954 31.123306800352584 28.464480092239004 22.88252234080546 49 20.457235799326668 28.5151740917548 31.403662006118054 19.623928102800477 50 17.64739715070296 34.42711099043234 26.549611234539334 21.37588062432536 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9.0 1 12.5 2 16.0 3 50.0 4 84.0 5 105.5 6 127.0 7 126.5 8 126.0 9 162.0 10 198.0 11 323.5 12 449.0 13 876.5 14 1304.0 15 1821.5 16 2339.0 17 2887.0 18 3435.0 19 3858.5 20 4282.0 21 4911.0 22 5540.0 23 6148.5 24 6757.0 25 8541.0 26 10325.0 27 17050.0 28 23775.0 29 28964.5 30 34154.0 31 40059.5 32 45965.0 33 56945.0 34 67925.0 35 79416.0 36 90907.0 37 88946.5 38 86986.0 39 76229.0 40 65472.0 41 56514.5 42 47557.0 43 42599.0 44 37641.0 45 39720.5 46 41800.0 47 44141.0 48 46482.0 49 41219.0 50 35956.0 51 30020.0 52 24084.0 53 20535.5 54 16987.0 55 15174.5 56 13362.0 57 11808.0 58 10254.0 59 8865.5 60 7477.0 61 6343.5 62 5210.0 63 4367.0 64 3524.0 65 2965.5 66 2407.0 67 2002.5 68 1598.0 69 1368.0 70 1138.0 71 944.5 72 751.0 73 646.0 74 541.0 75 437.0 76 333.0 77 263.5 78 194.0 79 134.5 80 75.0 81 56.5 82 38.0 83 26.5 84 15.0 85 14.5 86 14.0 87 9.5 88 5.0 89 3.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.017655957615001144 2 0.0038789603851138877 3 1.3375725465909958E-4 4 5.350290186363983E-4 5 0.0 6 5.350290186363983E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.6751450931819916E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 747623.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.344455929687335 #Duplication Level Percentage of deduplicated Percentage of total 1 80.09591036745293 45.93056402214591 2 12.25734534768075 14.057816002100736 3 3.5037719619758487 6.027656905835945 4 1.4103368316643075 3.2349999315755493 5 0.7053491146643567 2.022393061045709 6 0.41258482602104163 1.41956714238128 7 0.2791550710965074 1.120559697042968 8 0.19849222300632402 0.9105942827657454 9 0.1430971262793971 0.738524416643441 >10 0.8495911124058585 9.124935848697367 >50 0.07546428062085979 2.9848670435882596 >100 0.06046478972864298 6.764097153598773 >500 0.005390271952066617 2.2306428354290437 >1k 0.0030466754511680877 3.432781657149299 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3766 0.5037298210461689 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3343 0.4471505023253699 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2703 0.36154585934354616 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2024 0.27072468343001754 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1933 0.2585527732560395 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1821 0.24357196073422033 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1520 0.20331102708183135 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 1459 0.19515183454762627 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1450 0.19394801925569438 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 1445 0.19327923298239888 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 1370 0.1832474388829664 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 1366 0.18271240986433002 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1343 0.17963599300717073 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 954 0.12760442094478097 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 921 0.12319043154103071 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 915 0.12238788801307611 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 914 0.12225413075841701 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 869 0.11623505429875752 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 844 0.11289112293228004 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 843 0.11275736567762093 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 827 0.11061724960307534 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 783 0.10473193039807498 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 755 0.10098672726762017 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 1.3375725465909958E-4 0.0 16 0.0 0.0 0.0 4.012717639772987E-4 0.0 17 0.0 0.0 0.0 4.012717639772987E-4 0.0 18 0.0 0.0 0.0 4.012717639772987E-4 0.0 19 0.0 0.0 0.0 5.350290186363983E-4 0.0 20 0.0 0.0 0.0 9.36300782613697E-4 0.0 21 0.0 0.0 0.0 0.0010700580372727966 0.0 22 0.0 0.0 0.0 0.0021401160745455933 0.0 23 0.0 0.0 0.0 0.004949018422386684 0.0 24 0.0 0.0 0.0 0.008159192534205073 0.0 25 0.0 0.0 0.0 0.009898036844773368 0.0 26 0.0 0.0 0.0 0.01270693919261446 0.0 27 0.0 0.0 0.0 0.016987171341705645 0.0 28 0.0 0.0 0.0 0.025681392894547118 0.0 29 0.0 0.0 0.0 0.03598070150329778 0.0 30 0.0 0.0 0.0 0.055107988919549024 0.0 31 0.0 0.0 0.0 0.10152175628625658 0.0 32 0.0 0.0 0.0 0.1613112491188741 0.0 33 0.0 0.0 0.0 0.2156166945104685 0.0 34 0.0 0.0 0.0 0.2822278073307001 0.0 35 0.0 0.0 0.0 0.35566054013854576 0.0 36 0.0 0.0 0.0 0.45597848113287043 0.0 37 0.0 0.0 0.0 0.6176910020157218 0.0 38 0.0 0.0 0.0 0.7991995965881199 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGACCGT 30 1.3007413E-4 36.666275 6 TCGTATA 40 1.8192814E-5 32.99965 44 TACGGCG 45 4.067787E-5 29.333021 16 GTCGTAT 60 2.9431067E-7 29.333021 43 TCGTATC 30 0.005743927 29.333021 44 TAGGACC 1305 0.0 27.815796 4 CGTGTAA 40 7.030044E-4 27.499706 9 ACGATTT 60 9.747284E-6 25.666393 29 CTAGAGT 190 0.0 25.473413 4 GACGTGT 45 0.0013978019 24.444185 7 TCACGAT 55 1.59294E-4 23.999746 27 ACGGCGA 55 1.59294E-4 23.999746 17 CACGATT 65 1.8123405E-5 23.692055 28 TGTAGGA 3580 0.0 23.354832 2 CTGTAGG 3495 0.0 23.297958 1 GGACCTG 2315 0.0 22.61747 6 ATACACT 1510 0.0 22.58254 4 AGGACCT 2420 0.0 22.545214 5 ACTGTTC 1370 0.0 22.481512 8 ATAGGAC 265 0.0 22.414856 3 >>END_MODULE