##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062421_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1606962 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27988154044713 32.0 32.0 32.0 32.0 32.0 2 31.40081719418381 32.0 32.0 32.0 32.0 32.0 3 31.500736171732747 32.0 32.0 32.0 32.0 32.0 4 31.606103940230074 32.0 32.0 32.0 32.0 32.0 5 31.535775581500992 32.0 32.0 32.0 32.0 32.0 6 35.140433314540104 36.0 36.0 36.0 36.0 36.0 7 35.15290156207801 36.0 36.0 36.0 36.0 36.0 8 35.09267113970336 36.0 36.0 36.0 36.0 36.0 9 35.229733497120655 36.0 36.0 36.0 36.0 36.0 10 35.102017969311035 36.0 36.0 36.0 36.0 36.0 11 35.23778222509306 36.0 36.0 36.0 36.0 36.0 12 35.14403265291899 36.0 36.0 36.0 36.0 36.0 13 35.18652774614459 36.0 36.0 36.0 36.0 36.0 14 35.151963767655985 36.0 36.0 36.0 36.0 36.0 15 35.113741955316925 36.0 36.0 36.0 36.0 36.0 16 35.12047391288655 36.0 36.0 36.0 36.0 36.0 17 35.098203317813365 36.0 36.0 36.0 36.0 36.0 18 35.11407052562537 36.0 36.0 36.0 36.0 36.0 19 35.089799883257974 36.0 36.0 36.0 36.0 36.0 20 35.081568201363815 36.0 36.0 36.0 36.0 36.0 21 35.06303820501045 36.0 36.0 36.0 36.0 36.0 22 35.04047824404062 36.0 36.0 36.0 36.0 36.0 23 35.00116057504782 36.0 36.0 36.0 36.0 36.0 24 34.976130736134394 36.0 36.0 36.0 36.0 36.0 25 34.94731300429008 36.0 36.0 36.0 32.0 36.0 26 34.90437110522838 36.0 36.0 36.0 32.0 36.0 27 34.88217394064079 36.0 36.0 36.0 32.0 36.0 28 34.85419443645836 36.0 36.0 36.0 32.0 36.0 29 34.82374941037809 36.0 36.0 36.0 32.0 36.0 30 34.80311108787887 36.0 36.0 36.0 32.0 36.0 31 34.79574190304438 36.0 36.0 36.0 32.0 36.0 32 34.76491790098335 36.0 36.0 36.0 32.0 36.0 33 34.739899263330436 36.0 36.0 36.0 32.0 36.0 34 34.72419136233464 36.0 36.0 36.0 32.0 36.0 35 34.67971924662811 36.0 36.0 36.0 32.0 36.0 36 34.64342778485117 36.0 36.0 36.0 32.0 36.0 37 34.616595165287045 36.0 36.0 36.0 32.0 36.0 38 34.557369122605266 36.0 36.0 36.0 32.0 36.0 39 34.49014351303889 36.0 36.0 36.0 32.0 36.0 40 34.45473010562789 36.0 36.0 36.0 32.0 36.0 41 34.44008010145853 36.0 36.0 36.0 32.0 36.0 42 34.370009371721295 36.0 36.0 36.0 32.0 36.0 43 34.37346371600573 36.0 36.0 36.0 32.0 36.0 44 34.3574689382823 36.0 36.0 36.0 32.0 36.0 45 34.25099784562423 36.0 36.0 36.0 32.0 36.0 46 34.28365325377949 36.0 36.0 36.0 32.0 36.0 47 34.243107802175786 36.0 36.0 36.0 32.0 36.0 48 34.21207222074946 36.0 36.0 36.0 32.0 36.0 49 34.216772394120085 36.0 36.0 36.0 32.0 36.0 50 33.66773452016911 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 10.0 21 28.0 22 108.0 23 339.0 24 952.0 25 2274.0 26 4786.0 27 9107.0 28 16063.0 29 25651.0 30 38033.0 31 56010.0 32 85717.0 33 136103.0 34 288263.0 35 943518.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.017309723431545 18.044633593634764 11.935194964670414 26.002861718263276 2 15.169886750463938 20.495502503587666 38.13412707994429 26.200483666004104 3 18.794163605486414 24.401304084567606 28.798388998793367 28.00614331115261 4 11.94163876195816 16.103915661713412 36.37129058213755 35.583154994190885 5 13.652905295831513 37.35284343998178 34.07815492836794 14.916096335818768 6 34.19326092733035 35.535238341785124 16.973696247005986 13.297804483878537 7 29.66050223962981 30.66892683212173 21.037709665816614 18.632861262431845 8 27.6180768431363 34.41587293290071 19.646886485181355 18.319163738781626 9 26.961185143145887 14.465681204658232 18.666713960877733 39.90641969131815 10 15.471865545047114 27.321367897934113 32.381910711018676 24.824855846000094 11 37.27686155615378 20.920283118082445 22.604579324215507 19.198276001548262 12 24.35191373535902 23.82196965454068 29.607296252182692 22.21882035791761 13 30.10537896975784 19.729277979193036 25.4006628657056 24.764680185343522 14 22.88479752477034 20.604967634580035 25.117146516221293 31.39308832442833 15 24.826909410427874 28.62488347577603 22.75162698308983 23.796580130706264 16 25.184665225437815 25.86601301088638 25.494566766357885 23.45475499731792 17 23.251763265092766 26.642571510714006 26.467147325201218 23.638517898992013 18 24.59846592514322 24.616574629642766 28.302473860614004 22.48248558460001 19 25.039484443316024 26.12382869041085 25.29543324608796 23.541253620185167 20 24.96182237041075 24.883351317579383 26.554952761795235 23.599873550214628 21 25.703656962641308 25.27327964195793 24.181094512502472 24.84196888289829 22 24.547064585223545 26.140319435058203 25.18317172403579 24.12944425568246 23 23.123322144518664 25.546279252402982 25.756489574737923 25.573909028340434 24 24.118803058193038 26.282139839025444 25.712929117178874 23.886127985602645 25 24.731760925273903 25.273528558858267 25.447272555293775 24.547437960574054 26 23.06103069020923 26.20646910132287 26.57729305360052 24.155207154867384 27 24.594981088538496 26.076970083922333 25.65045097519419 23.677597852344984 28 23.486118526760432 25.458287128133712 25.887731010440817 25.167863334665036 29 23.42158682034796 25.766072875400916 26.152765280075073 24.659575024176053 30 24.04002085923625 25.5879728332095 26.434788128157354 23.9372181793969 31 24.282963753965557 25.290205991180876 25.460651838686914 24.966178416166652 32 23.609145704752198 26.080890525102646 25.54080308059556 24.769160689549597 33 23.03800587692802 25.650699892094526 26.386311561816644 24.924982669160816 34 23.685189817805274 26.19620127918395 26.891861786401915 23.226747116608855 35 24.822802281572308 25.755680594811825 26.23920167371724 23.182315449898628 36 23.408456453855162 26.36334897776052 26.07323633041727 24.154958237967044 37 24.75042969279921 25.921957084237214 25.417775902603797 23.909837320359784 38 23.848541533651698 26.117481309452245 25.397240258325958 24.636736898570096 39 24.525471044119275 25.314537618188854 25.65947421283142 24.50051712486045 40 25.453059873226625 25.551755424210405 25.579509658598027 23.41567504396495 41 23.655444248214955 25.478947230861714 26.919864937689873 23.945743583233455 42 25.515164639860803 26.578288721201872 25.647401743165055 22.25914489577227 43 24.022161071637036 25.08995234485943 26.103728650708604 24.784157932794926 44 23.498813288677642 25.89127807627063 26.310516365663904 24.299392269387827 45 23.903241022500843 26.15562782442895 25.898683354055663 24.04244779901454 46 23.630208592622093 25.181273958281476 26.521506446955744 24.667011002140686 47 24.83082985160819 24.860948796549014 26.62744980901851 23.680771542824285 48 24.424908616382965 26.782089433353125 24.847507283930796 23.94549466633312 49 23.706534442009207 25.738194182563124 26.485691634276353 24.069579741151315 50 23.34630398621995 27.36606551123518 24.645588785290993 24.642041717253875 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 15.0 1 20.5 2 26.0 3 85.0 4 144.0 5 170.0 6 196.0 7 171.5 8 147.0 9 242.0 10 337.0 11 499.0 12 661.0 13 1167.0 14 1673.0 15 2223.0 16 2773.0 17 3390.0 18 4007.0 19 4461.5 20 4916.0 21 5961.0 22 7006.0 23 7847.0 24 8688.0 25 10405.5 26 12123.0 27 16416.0 28 20709.0 29 24176.5 30 27644.0 31 31457.5 32 35271.0 33 41745.5 34 48220.0 35 55819.5 36 63419.0 37 70197.5 38 76976.0 39 78199.5 40 79423.0 41 82164.0 42 84905.0 43 85808.0 44 86711.0 45 98900.0 46 111089.0 47 121290.0 48 131491.0 49 129285.0 50 127079.0 51 116068.0 52 105057.0 53 101157.0 54 97257.0 55 98616.5 56 99976.0 57 96397.0 58 92818.0 59 84747.0 60 76676.0 61 67211.5 62 57747.0 63 49998.0 64 42249.0 65 36162.5 66 30076.0 67 25724.0 68 21372.0 69 19986.0 70 18600.0 71 14227.0 72 9854.0 73 8984.0 74 8114.0 75 5711.0 76 3308.0 77 3054.5 78 2801.0 79 2454.5 80 2108.0 81 1691.5 82 1275.0 83 1101.5 84 928.0 85 791.5 86 655.0 87 483.0 88 311.0 89 192.5 90 74.0 91 47.5 92 21.0 93 20.5 94 20.0 95 15.0 96 10.0 97 6.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014623867894822652 2 0.004231587305735917 3 6.845214759278688E-4 4 3.111461254217586E-4 5 0.0 6 3.111461254217586E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2445845016870343E-4 47 0.0 48 0.0 49 0.0 50 6.222922508435171E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1606962.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.8783218540705 #Duplication Level Percentage of deduplicated Percentage of total 1 79.43951668121326 42.8006784768221 2 12.640740008553353 13.621237173089268 3 3.620231235606747 5.851559510945388 4 1.4603414987914753 3.147229971549712 5 0.7449299273895511 2.00677871933118 6 0.46316625407609396 1.4972772305433586 7 0.28963944148834425 1.092370093509956 8 0.20680746263574626 0.8913951226969915 9 0.1481276769892676 0.7182783590691197 >10 0.8010096247946247 7.992503437533065 >50 0.08657308492853795 3.2684009806195533 >100 0.08463696793929755 9.859635397131106 >500 0.010216682376003313 3.774200718801921 >1k 0.003947354554364917 3.1114621567967444 >5k 1.1609866336367402E-4 0.3669926515605826 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5867 0.3650988635698915 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 4618 0.2873745614395362 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2124 0.13217487407916306 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2079 0.12937455895036723 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1925 0.11979125828737705 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1815 0.11294604352809837 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1794 0.11163922980132698 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1789 0.11132808367590522 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2445845016870343E-4 2 0.0 0.0 0.0 0.0 1.2445845016870343E-4 3 0.0 0.0 0.0 0.0 1.2445845016870343E-4 4 0.0 0.0 0.0 0.0 1.2445845016870343E-4 5 0.0 0.0 0.0 0.0 1.2445845016870343E-4 6 0.0 0.0 0.0 0.0 1.2445845016870343E-4 7 0.0 0.0 0.0 6.222922508435171E-5 1.2445845016870343E-4 8 0.0 0.0 0.0 6.222922508435171E-5 1.2445845016870343E-4 9 0.0 0.0 0.0 6.222922508435171E-5 1.2445845016870343E-4 10 0.0 0.0 0.0 6.222922508435171E-5 1.2445845016870343E-4 11 0.0 0.0 0.0 6.222922508435171E-5 1.2445845016870343E-4 12 0.0 0.0 0.0 6.222922508435171E-5 3.733753505061103E-4 13 0.0 0.0 0.0 6.222922508435171E-5 5.600630257591654E-4 14 0.0 0.0 0.0 1.2445845016870343E-4 5.600630257591654E-4 15 0.0 0.0 0.0 1.2445845016870343E-4 6.845214759278688E-4 16 0.0 0.0 0.0 1.2445845016870343E-4 6.845214759278688E-4 17 0.0 0.0 0.0 1.2445845016870343E-4 6.845214759278688E-4 18 0.0 0.0 0.0 1.8668767525305516E-4 7.467507010122206E-4 19 0.0 0.0 0.0 2.4891690033740686E-4 7.467507010122206E-4 20 0.0 0.0 0.0 3.733753505061103E-4 7.467507010122206E-4 21 0.0 0.0 0.0 4.978338006748137E-4 8.089799260965723E-4 22 0.0 0.0 0.0 6.845214759278688E-4 9.334383762652757E-4 23 0.0 0.0 0.0 0.0012445845016870343 9.334383762652757E-4 24 0.0 0.0 0.0 0.00217802287795231 9.334383762652757E-4 25 0.0 0.0 0.0 0.0025513982284584204 9.334383762652757E-4 26 0.0 0.0 0.0 0.003733753505061103 0.0010578968264339792 27 0.0 0.0 0.0 0.0049161087816637855 0.0011201260515183308 28 0.0 0.0 0.0 0.008400945386387481 0.0011201260515183308 29 0.0 0.0 0.0 0.013317054168051267 0.0011201260515183308 30 0.0 0.0 0.0 0.023647105532053653 0.0011201260515183308 31 0.0 0.0 0.0 0.046174085012588975 0.0011201260515183308 32 0.0 0.0 0.0 0.07249704722326974 0.0011201260515183308 33 0.0 0.0 0.0 0.10112249076207154 0.0011201260515183308 34 0.0 0.0 0.0 0.13242379097950044 0.0011823552766026825 35 0.0 0.0 0.0 0.1715037443324733 0.0011823552766026825 36 0.0 0.0 0.0 0.2255187117056906 0.0011823552766026825 37 0.0 0.0 0.0 0.31170618844751774 0.0011823552766026825 38 0.0 0.0 0.0 0.4249011488759535 0.0012445845016870343 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 480 0.0 21.999846 36 TGTAGGA 1630 0.0 20.651445 2 CAATACG 530 0.0 19.924387 38 GTAGGAC 1620 0.0 19.828255 3 CGGGATT 190 0.0 19.684072 44 AATACGA 560 0.0 19.642717 39 CTGTAGG 1660 0.0 19.218525 1 TAGCGGC 575 0.0 19.130299 30 GCAATAC 575 0.0 19.130299 37 CTAGCGG 575 0.0 19.130299 29 TCTAGCG 565 0.0 19.079512 28 GTCCTAA 740 0.0 19.02867 1 CGTCTTA 280 0.0 18.85701 15 ATACGAA 550 0.0 18.799868 40 AGGACCT 1235 0.0 18.170477 5 TAGGACA 645 0.0 18.077953 4 CGAATGC 560 0.0 18.0713 43 GGACCTG 1235 0.0 17.814194 6 TACGAAT 600 0.0 17.599874 41 GCGAGAA 1040 0.0 17.55757 20 >>END_MODULE