##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062419_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1689354 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.225323407645764 32.0 32.0 32.0 32.0 32.0 2 31.365819715701978 32.0 32.0 32.0 32.0 32.0 3 31.47791167511368 32.0 32.0 32.0 32.0 32.0 4 31.594985420462496 32.0 32.0 32.0 32.0 32.0 5 31.518424202387422 32.0 32.0 32.0 32.0 32.0 6 35.11015926798054 36.0 36.0 36.0 36.0 36.0 7 35.12497913403585 36.0 36.0 36.0 36.0 36.0 8 35.06130449864268 36.0 36.0 36.0 36.0 36.0 9 35.19040059099514 36.0 36.0 36.0 36.0 36.0 10 35.07212934648392 36.0 36.0 36.0 36.0 36.0 11 35.21159804280216 36.0 36.0 36.0 36.0 36.0 12 35.11349663835999 36.0 36.0 36.0 36.0 36.0 13 35.16516313336341 36.0 36.0 36.0 36.0 36.0 14 35.123309264961634 36.0 36.0 36.0 36.0 36.0 15 35.081329312861605 36.0 36.0 36.0 36.0 36.0 16 35.09664759428752 36.0 36.0 36.0 36.0 36.0 17 35.07184817391737 36.0 36.0 36.0 36.0 36.0 18 35.08629985189605 36.0 36.0 36.0 36.0 36.0 19 35.0638054546294 36.0 36.0 36.0 36.0 36.0 20 35.04883345941703 36.0 36.0 36.0 36.0 36.0 21 35.03392657785165 36.0 36.0 36.0 36.0 36.0 22 35.010506974855474 36.0 36.0 36.0 36.0 36.0 23 34.96685537785449 36.0 36.0 36.0 36.0 36.0 24 34.95121626373158 36.0 36.0 36.0 36.0 36.0 25 34.92106864517443 36.0 36.0 36.0 32.0 36.0 26 34.87695355739531 36.0 36.0 36.0 32.0 36.0 27 34.86085036055202 36.0 36.0 36.0 32.0 36.0 28 34.8385637350135 36.0 36.0 36.0 32.0 36.0 29 34.80728728259441 36.0 36.0 36.0 32.0 36.0 30 34.79157535957532 36.0 36.0 36.0 32.0 36.0 31 34.78820365654564 36.0 36.0 36.0 32.0 36.0 32 34.741745069417064 36.0 36.0 36.0 32.0 36.0 33 34.71322292426572 36.0 36.0 36.0 32.0 36.0 34 34.700225056441695 36.0 36.0 36.0 32.0 36.0 35 34.65397720075248 36.0 36.0 36.0 32.0 36.0 36 34.61798000892649 36.0 36.0 36.0 32.0 36.0 37 34.590886220413246 36.0 36.0 36.0 32.0 36.0 38 34.55106863333558 36.0 36.0 36.0 32.0 36.0 39 34.506160934889905 36.0 36.0 36.0 32.0 36.0 40 34.48463258736771 36.0 36.0 36.0 32.0 36.0 41 34.45695810351176 36.0 36.0 36.0 32.0 36.0 42 34.3980983263425 36.0 36.0 36.0 32.0 36.0 43 34.39872223346912 36.0 36.0 36.0 32.0 36.0 44 34.361589104474255 36.0 36.0 36.0 32.0 36.0 45 34.278143006143175 36.0 36.0 36.0 32.0 36.0 46 34.30081853773691 36.0 36.0 36.0 32.0 36.0 47 34.25015124124369 36.0 36.0 36.0 32.0 36.0 48 34.22167526758749 36.0 36.0 36.0 32.0 36.0 49 34.20879815598152 36.0 36.0 36.0 32.0 36.0 50 33.66363533042808 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 12.0 21 62.0 22 156.0 23 448.0 24 1243.0 25 2923.0 26 6006.0 27 11166.0 28 18845.0 29 28124.0 30 40839.0 31 58453.0 32 86466.0 33 137912.0 34 298096.0 35 998601.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.04480545622469 18.245257773462477 11.828154971937387 25.881781798375446 2 15.495422326355632 21.010059871448647 37.74813737875055 25.74638042344517 3 18.59979033318791 25.153861225668855 28.829719412293624 27.41662902884961 4 11.958542708362314 16.248350699942524 36.903122082832894 34.88998450886227 5 13.686651820755152 37.59028599097643 33.967836226155086 14.755225962113327 6 33.31186547228012 36.33433510107752 17.147276432846535 13.206522993795828 7 29.068211872704 31.00303429594981 21.458616725683306 18.470137105662875 8 27.499091368653346 33.7804273112681 20.06506629161206 18.6554150284665 9 27.25083079094139 14.354481061991745 18.76350368247271 39.63118446459416 10 15.284895883278459 27.610968453029976 32.57132608085694 24.532809582834624 11 37.12277000557609 21.26380853272908 22.62740668918415 18.986014772510675 12 23.9289692983235 24.097199284460213 29.9383077791866 22.035523638029687 13 29.686377159553295 20.079450488174768 25.674784562619795 24.55938778965214 14 23.058340643820063 20.299120255434918 25.76020182862798 30.882337272117034 15 24.8198423776189 27.98768049798917 23.342591310051063 23.849885814340865 16 25.065320826777572 26.172548796759 25.104270626523512 23.65785974993992 17 23.112207388149553 26.322724544411653 26.437028591994338 24.12803947544446 18 24.098619945849123 25.25219699364372 27.838451857929126 22.810731202578026 19 24.844585563475743 25.948439462658506 25.865626742529983 23.341348231335765 20 24.75697811115965 25.06247950399975 26.542808671243563 23.63773371359703 21 25.962350105424914 24.98090986258653 24.81303504179704 24.243704990191517 22 24.492439121699775 25.62156895476022 25.784708237586674 24.10128368595333 23 23.645843322358722 25.1525139195219 26.058836691421693 25.142806066697688 24 23.853023108241374 26.189123179629608 25.97288667739266 23.984967034736353 25 24.456981781201574 25.267942657370806 26.033442369094935 24.24163319233269 26 23.29434801705267 26.042499085449233 26.72802739982265 23.935125497675443 27 24.512920323389885 25.80299925296889 26.015151353712724 23.668929069928506 28 23.533670266859403 25.505370691992326 26.353031987375058 24.607927053773217 29 23.503717989243224 25.66436637910112 26.464731489078076 24.367184142577578 30 23.908369708184313 25.752269802539907 26.58483657066547 23.75452391861031 31 23.892209684885465 25.585993225812942 25.884924059729343 24.63687302957225 32 23.60251314999698 26.07097150745196 25.87811672390748 24.448398618643576 33 23.465656102865356 25.46908463235059 26.389436435465864 24.67582282931819 34 23.745052842684245 26.025095983435087 26.81894972871287 23.4109014451678 35 24.791369955616172 25.651876397723626 26.274481251413263 23.28227239524694 36 23.573152814626184 26.28803672883244 26.011481311791375 24.127329144750004 37 24.55832229361046 25.879478191071854 25.80737962558469 23.754819889732996 38 23.827155232118315 25.901853607947178 25.873026020597223 24.397965139337284 39 24.204104053975662 25.499688046436685 25.90978563403526 24.386422265552394 40 24.955574734484305 25.67537650486517 25.931154749093437 23.43789401155708 41 23.42374659189252 25.70189551745815 26.928695821006137 23.945662069643188 42 25.029745097830297 26.317929812224083 25.947669937739516 22.70465515220611 43 23.857225898183565 25.219817752821495 26.31573962591618 24.60721672307876 44 23.430139568142614 26.014736994140957 26.309761009237853 24.24536242847858 45 23.6701721486438 26.123535978841616 26.202737851273326 24.003554021241253 46 23.482139897428127 25.54293007022811 26.353655129304016 24.621274903039744 47 24.130007168424836 25.365332171547333 26.583372450873206 23.92128820915463 48 24.180663141058652 26.51480980303714 25.280787804095528 24.023739251808678 49 23.40148956346627 26.03930259732418 26.421342122491794 24.13786571671775 50 23.318513063877116 27.03958260943687 25.21657699722912 24.4253273294569 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 61.0 1 59.0 2 57.0 3 219.0 4 381.0 5 404.0 6 427.0 7 388.5 8 350.0 9 446.0 10 542.0 11 832.0 12 1122.0 13 1912.5 14 2703.0 15 3617.5 16 4532.0 17 5263.5 18 5995.0 19 6668.5 20 7342.0 21 8649.5 22 9957.0 23 10831.5 24 11706.0 25 13836.0 26 15966.0 27 20325.5 28 24685.0 29 28047.5 30 31410.0 31 34290.0 32 37170.0 33 42456.0 34 47742.0 35 54461.5 36 61181.0 37 68811.0 38 76441.0 39 79571.0 40 82701.0 41 87561.0 42 92421.0 43 93345.5 44 94270.0 45 105101.0 46 115932.0 47 123010.5 48 130089.0 49 128930.0 50 127771.0 51 119507.5 52 111244.0 53 107256.0 54 103268.0 55 103665.0 56 104062.0 57 100865.5 58 97669.0 59 88212.0 60 78755.0 61 69649.5 62 60544.0 63 52330.5 64 44117.0 65 38117.0 66 32117.0 67 27771.5 68 23426.0 69 21406.0 70 19386.0 71 15027.5 72 10669.0 73 9689.5 74 8710.0 75 6290.5 76 3871.0 77 3461.0 78 3051.0 79 2595.0 80 2139.0 81 1770.5 82 1402.0 83 1162.0 84 922.0 85 766.5 86 611.0 87 450.0 88 289.0 89 190.0 90 91.0 91 62.0 92 33.0 93 20.5 94 8.0 95 6.5 96 5.0 97 6.5 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01621921752338468 2 0.00402520726857722 3 4.14359571765302E-4 4 5.919422453790028E-5 5 0.0 6 4.14359571765302E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.1838844907580056E-4 47 5.919422453790028E-5 48 0.0 49 0.0 50 5.919422453790028E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1689354.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.13743686525074 #Duplication Level Percentage of deduplicated Percentage of total 1 77.23504095750619 42.585421945795524 2 14.013023413481044 15.45284387504183 3 4.143456708970305 6.853787480842495 4 1.7244515408830108 3.803273518504855 5 0.8397148516655973 2.3149862309262637 6 0.49362490505910533 1.6330327222687087 7 0.3033020112365641 1.1706306846961738 8 0.19842287169621747 0.8752422848617553 9 0.14985048753939798 0.7436134616337539 >10 0.7323716329799308 7.428741397089922 >50 0.07804337843914412 3.0491655027668743 >100 0.07736762903308958 8.957021342588819 >500 0.008847887084347882 3.2206416966462057 >1k 0.0024817244260975763 1.9115978563368534 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2980 0.17639878912294285 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2644 0.15650952967820836 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3677689815160114E-4 2 0.0 0.0 0.0 0.0 2.3677689815160114E-4 3 0.0 0.0 0.0 5.9194224537900286E-5 2.3677689815160114E-4 4 0.0 0.0 0.0 1.1838844907580057E-4 2.3677689815160114E-4 5 0.0 0.0 0.0 1.1838844907580057E-4 2.3677689815160114E-4 6 0.0 0.0 0.0 1.1838844907580057E-4 2.959711226895014E-4 7 0.0 0.0 0.0 1.1838844907580057E-4 2.959711226895014E-4 8 0.0 0.0 0.0 1.1838844907580057E-4 2.959711226895014E-4 9 0.0 0.0 0.0 1.7758267361370087E-4 2.959711226895014E-4 10 0.0 0.0 0.0 1.7758267361370087E-4 2.959711226895014E-4 11 0.0 0.0 0.0 1.7758267361370087E-4 3.5516534722740173E-4 12 0.0 0.0 0.0 1.7758267361370087E-4 4.735537963032023E-4 13 0.0 0.0 0.0 2.3677689815160114E-4 8.28719143530604E-4 14 0.0 0.0 0.0 2.959711226895014E-4 8.28719143530604E-4 15 0.0 0.0 0.0 2.959711226895014E-4 9.471075926064046E-4 16 0.0 0.0 0.0 3.5516534722740173E-4 0.001006301817144305 17 0.0 0.0 0.0 3.5516534722740173E-4 0.001006301817144305 18 0.0 0.0 0.0 7.103306944548035E-4 0.001006301817144305 19 0.0 0.0 0.0 7.103306944548035E-4 0.0010654960416822052 20 0.0 0.0 0.0 9.471075926064046E-4 0.0011838844907580057 21 0.0 0.0 0.0 0.0013614671643717067 0.0011838844907580057 22 0.0 0.0 0.0 0.002249380532440211 0.0011838844907580057 23 0.0 0.0 0.0 0.003966013044039319 0.0011838844907580057 24 0.0 0.0 0.0 0.006688947372782732 0.0011838844907580057 25 0.0 0.0 0.0 0.008583162557995542 0.0011838844907580057 26 0.0 0.0 0.0 0.01041818351867045 0.0013022729398338062 27 0.0 0.0 0.0 0.012785952500186461 0.0013022729398338062 28 0.0 0.0 0.0 0.019001346076665992 0.0013022729398338062 29 0.0 0.0 0.0 0.029893083391639645 0.0013022729398338062 30 0.0 0.0 0.0 0.05084783887805635 0.0013022729398338062 31 0.0 0.0 0.0 0.08790342343878192 0.0013614671643717067 32 0.0 0.0 0.0 0.13413411280288204 0.0013614671643717067 33 0.0 0.0 0.0 0.17929930612529996 0.0013614671643717067 34 0.0 0.0 0.0 0.23139022371865223 0.0014798556134475072 35 0.0 0.0 0.0 0.2907028367056283 0.0014798556134475072 36 0.0 0.0 0.0 0.37363394528322663 0.0014798556134475072 37 0.0 0.0 0.0 0.502854937449463 0.0014798556134475072 38 0.0 0.0 0.0 0.669072319951887 0.0014798556134475072 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGGT 50 0.0025809994 21.999794 4 TCGTATA 60 2.873615E-4 21.999792 44 GGCGTTA 400 0.0 19.799814 42 GTATTAG 525 0.0 19.700302 1 TTAACGG 260 0.0 19.461355 35 TAACGGC 270 0.0 18.740564 36 AATCACG 495 0.0 18.22205 34 TCACGGA 510 0.0 18.117476 36 TAGGACG 705 0.0 17.787067 4 ATCACGG 495 0.0 17.77761 35 TGTAGGA 970 0.0 17.46582 2 GATATAC 745 0.0 17.427298 1 CAATACG 455 0.0 17.40643 38 AGGACGT 725 0.0 17.296389 5 GCATTCG 500 0.0 17.159838 22 TACCGTC 385 0.0 17.142696 7 ACCGGAC 90 2.2161867E-4 17.11095 8 GTCGTAT 90 2.2161867E-4 17.11095 43 GGACGTG 735 0.0 17.061064 6 CGGCGTT 495 0.0 16.88873 41 >>END_MODULE