##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062418_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1614472 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.313093692550876 32.0 32.0 32.0 32.0 32.0 2 31.458386395056714 32.0 32.0 32.0 32.0 32.0 3 31.526565341486258 32.0 32.0 32.0 32.0 32.0 4 31.61917952123047 32.0 32.0 32.0 32.0 32.0 5 31.56574099767602 32.0 32.0 32.0 32.0 32.0 6 35.16929064115079 36.0 36.0 36.0 36.0 36.0 7 35.182411339434815 36.0 36.0 36.0 36.0 36.0 8 35.11987200769044 36.0 36.0 36.0 36.0 36.0 9 35.23995832693289 36.0 36.0 36.0 36.0 36.0 10 35.12989757642127 36.0 36.0 36.0 36.0 36.0 11 35.24660322384037 36.0 36.0 36.0 36.0 36.0 12 35.160152669107916 36.0 36.0 36.0 36.0 36.0 13 35.20484591866567 36.0 36.0 36.0 36.0 36.0 14 35.16877096660704 36.0 36.0 36.0 36.0 36.0 15 35.136709091269466 36.0 36.0 36.0 36.0 36.0 16 35.14567672898632 36.0 36.0 36.0 36.0 36.0 17 35.11740246966191 36.0 36.0 36.0 36.0 36.0 18 35.13105832742841 36.0 36.0 36.0 36.0 36.0 19 35.118482698987656 36.0 36.0 36.0 36.0 36.0 20 35.10528829239529 36.0 36.0 36.0 36.0 36.0 21 35.097929849511175 36.0 36.0 36.0 36.0 36.0 22 35.082986883637496 36.0 36.0 36.0 36.0 36.0 23 35.04351081963639 36.0 36.0 36.0 36.0 36.0 24 35.027252872765835 36.0 36.0 36.0 36.0 36.0 25 35.00099041668112 36.0 36.0 36.0 36.0 36.0 26 34.95981039002225 36.0 36.0 36.0 36.0 36.0 27 34.94270448790688 36.0 36.0 36.0 32.0 36.0 28 34.9276240157773 36.0 36.0 36.0 32.0 36.0 29 34.90742236471119 36.0 36.0 36.0 32.0 36.0 30 34.895524357189224 36.0 36.0 36.0 32.0 36.0 31 34.889599819631435 36.0 36.0 36.0 32.0 36.0 32 34.861370776328116 36.0 36.0 36.0 32.0 36.0 33 34.83753450044349 36.0 36.0 36.0 32.0 36.0 34 34.823469840294536 36.0 36.0 36.0 32.0 36.0 35 34.79641641353953 36.0 36.0 36.0 32.0 36.0 36 34.77390626780768 36.0 36.0 36.0 32.0 36.0 37 34.76392343750774 36.0 36.0 36.0 32.0 36.0 38 34.725830488233925 36.0 36.0 36.0 32.0 36.0 39 34.70738235162951 36.0 36.0 36.0 32.0 36.0 40 34.68977659569197 36.0 36.0 36.0 32.0 36.0 41 34.66975085352982 36.0 36.0 36.0 32.0 36.0 42 34.63324665896962 36.0 36.0 36.0 32.0 36.0 43 34.62747759019667 36.0 36.0 36.0 32.0 36.0 44 34.602265012957794 36.0 36.0 36.0 32.0 36.0 45 34.554818541294 36.0 36.0 36.0 32.0 36.0 46 34.557609546650546 36.0 36.0 36.0 32.0 36.0 47 34.52943624912665 36.0 36.0 36.0 32.0 36.0 48 34.49397140365395 36.0 36.0 36.0 32.0 36.0 49 34.48703724809101 36.0 36.0 36.0 32.0 36.0 50 33.98107430788518 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 30.0 22 130.0 23 348.0 24 957.0 25 2285.0 26 4750.0 27 9088.0 28 15232.0 29 23880.0 30 34589.0 31 49529.0 32 73524.0 33 118648.0 34 264460.0 35 1017015.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.29584667584768 17.767737722873424 11.67171870169824 26.26469689958066 2 16.397641489857897 19.94302559016953 36.460401298555695 27.19893162141688 3 18.871476150274116 23.267736702544436 28.365778590156605 29.495008557024843 4 12.668887007290952 15.09885305800614 35.38245129816837 36.84980863653454 5 14.76594205412048 36.20589270052376 33.20664588794355 15.821519357412207 6 35.39971829624977 34.5338570991451 16.20663725748887 13.859787347116253 7 30.99347650501216 30.077883047832355 20.146029166191795 18.782611280963685 8 28.475749347154984 32.735346292781784 19.142481257030163 19.64642310303307 9 27.13809839997225 14.274512038610766 18.583474968906245 40.00391459251074 10 16.12260850606266 26.38286696827198 31.18536586574434 26.309158659921017 11 37.77575578888949 21.061065165577354 21.808182489383526 19.354996556149626 12 24.878288381588533 23.415333310209157 28.205258437433418 23.501119870768893 13 29.420144790371094 19.051305937792666 25.440577476723043 26.0879717951132 14 23.5506097349474 19.442517429847033 24.704671248556803 32.30220158664876 15 25.338376881110356 27.163060121203713 22.14166612985546 25.356896867830475 16 26.05204673726147 25.660897184962018 23.604001803685662 24.68305427409085 17 24.188836969609877 25.882703447319 25.17727157857182 24.7511880044993 18 25.232955418242003 24.51693185140405 26.16545842851409 24.08465430183986 19 25.48052861864436 25.101767017328264 25.240512068341847 24.177192295685522 20 25.663127016139022 24.201596559122734 25.151194941751854 24.98408148298639 21 26.53300893419025 24.162388694260414 24.51519753826638 24.789404833282955 22 25.685177568889394 24.3325372010168 24.95521755719517 25.027067672898635 23 24.289984589388975 24.133958346753616 25.446213994420468 26.12984306943694 24 24.752488739352557 24.99696495200908 25.20012734813611 25.050418960502256 25 25.112234835909202 24.292462179585648 25.150575544202685 25.44472744030246 26 24.521577333022808 25.06193975491678 25.666162064129942 24.750320847930467 27 25.317441243948487 24.702317537869966 25.048932406384257 24.931308811797294 28 24.602222893924452 24.45220480751602 25.605956622350835 25.339615676208695 29 24.556821053570456 24.720589765570416 25.633086235004388 25.08950294585474 30 24.563138908571965 24.906285150810913 25.80428771759436 24.72628822302276 31 25.051286117071093 24.678532671981923 24.844778974178556 25.42540223676843 32 24.750940245479637 24.738056776456947 24.872961562665687 25.638041415397726 33 24.400794810935093 24.541088355821593 25.346800687779037 25.711316145464274 34 25.072221754232967 24.67109990139191 25.66380835344311 24.59286999093202 35 25.61376103147035 24.536814512732334 25.38922941989703 24.46019503590028 36 24.56883736602431 25.0103439390711 25.18228869872008 25.23852999618451 37 25.58570232249305 24.61151385716197 25.041623515304074 24.761160305040907 38 24.758311076314733 24.511852791500875 25.2602708501603 25.469565282024092 39 25.23320317726167 24.45121377143735 24.883739080021208 25.431843971279772 40 25.442621488635293 24.610275062063636 25.37368254141292 24.573420907888153 41 24.404387316720268 24.797518941177053 25.872235628738068 24.925858113364615 42 25.633953391573222 25.013750625591523 25.262686500602054 24.0896094822332 43 24.823843337016687 23.987037248091017 25.430605176181437 25.758514238710863 44 24.285524927034967 24.66533950418465 25.507720171052828 25.54141539772755 45 24.47567997462948 24.832267143685367 25.417412008384165 25.274640873300992 46 24.338731176508478 24.369886873231618 25.755726949739604 25.535655000520297 47 24.599187845933532 24.365736909652195 25.990726379893857 25.044348864520412 48 25.15051360444777 25.168166434599055 24.836726806039376 24.844593154913806 49 24.19323469220897 25.07624783830255 25.37640789062926 25.35410957885922 50 24.137365033274037 25.415677695246497 25.11130573958545 25.335651531894023 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 19.0 2 29.0 3 102.5 4 176.0 5 216.5 6 257.0 7 233.5 8 210.0 9 316.5 10 423.0 11 608.5 12 794.0 13 1389.0 14 1984.0 15 2625.0 16 3266.0 17 3686.0 18 4106.0 19 4448.5 20 4791.0 21 5505.5 22 6220.0 23 6937.5 24 7655.0 25 8750.5 26 9846.0 27 12063.5 28 14281.0 29 16650.0 30 19019.0 31 21420.0 32 23821.0 33 27754.5 34 31688.0 35 37236.0 36 42784.0 37 49885.5 38 56987.0 39 62597.5 40 68208.0 41 74663.5 42 81119.0 43 84283.0 44 87447.0 45 97120.0 46 106793.0 47 114701.5 48 122610.0 49 125414.5 50 128219.0 51 123384.5 52 118550.0 53 116711.0 54 114872.0 55 115366.5 56 115861.0 57 112125.5 58 108390.0 59 100534.0 60 92678.0 61 81238.5 62 69799.0 63 60878.5 64 51958.0 65 44353.5 66 36749.0 67 31598.0 68 26447.0 69 23974.5 70 21502.0 71 16598.0 72 11694.0 73 10469.5 74 9245.0 75 6891.5 76 4538.0 77 4024.5 78 3511.0 79 2986.5 80 2462.0 81 1914.5 82 1367.0 83 1195.0 84 1023.0 85 846.0 86 669.0 87 480.0 88 291.0 89 183.0 90 75.0 91 49.5 92 24.0 93 19.5 94 15.0 95 10.0 96 5.0 97 4.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01678567358244677 2 0.0039022045597569975 3 5.574577942509997E-4 4 3.096987745838887E-4 5 0.0 6 6.193975491677774E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1614472.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.15244445976997 #Duplication Level Percentage of deduplicated Percentage of total 1 79.68496414408457 43.151355950913015 2 11.88582847124515 12.872933322949113 3 3.4125711869024467 5.543972149912381 4 1.4762724241218983 3.1977504181900427 5 0.8201361230632285 2.2206187926816274 6 0.5108875956248551 1.6599487288356232 7 0.3680285879378457 1.3950753367538231 8 0.2688281556558285 1.164616141469972 9 0.2136880459517286 1.041455703610598 >10 1.1876221047562088 11.594222262970357 >50 0.08636588429893283 3.212782749624332 >100 0.07445109921347312 8.392656441450507 >500 0.00793973581035077 2.8523537089450492 >1k 0.002416441333585017 1.7002582916936015 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1825 0.11304005272311937 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1773 0.10981918546744693 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1694 0.1049259448290215 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.193975491677775E-5 2 0.0 0.0 0.0 0.0 6.193975491677775E-5 3 0.0 0.0 0.0 0.0 6.193975491677775E-5 4 0.0 0.0 0.0 6.193975491677775E-5 6.193975491677775E-5 5 0.0 0.0 0.0 1.238795098335555E-4 1.8581926475033325E-4 6 0.0 0.0 0.0 1.238795098335555E-4 1.8581926475033325E-4 7 0.0 0.0 0.0 1.238795098335555E-4 1.8581926475033325E-4 8 0.0 0.0 0.0 1.238795098335555E-4 1.8581926475033325E-4 9 0.0 0.0 0.0 1.238795098335555E-4 1.8581926475033325E-4 10 0.0 0.0 0.0 1.8581926475033325E-4 1.8581926475033325E-4 11 0.0 0.0 0.0 1.8581926475033325E-4 1.8581926475033325E-4 12 0.0 0.0 0.0 1.8581926475033325E-4 3.0969877458388874E-4 13 0.0 0.0 0.0 1.8581926475033325E-4 3.0969877458388874E-4 14 0.0 0.0 0.0 1.8581926475033325E-4 3.716385295006665E-4 15 0.0 0.0 0.0 2.47759019667111E-4 3.716385295006665E-4 16 0.0 0.0 0.0 3.0969877458388874E-4 3.716385295006665E-4 17 0.0 0.0 0.0 3.0969877458388874E-4 3.716385295006665E-4 18 0.0 0.0 0.0 3.0969877458388874E-4 3.716385295006665E-4 19 0.0 0.0 0.0 3.0969877458388874E-4 3.716385295006665E-4 20 0.0 0.0 0.0 5.574577942509997E-4 3.716385295006665E-4 21 0.0 0.0 0.0 8.671565688348885E-4 3.716385295006665E-4 22 0.0 0.0 0.0 0.0011768553434187772 3.716385295006665E-4 23 0.0 0.0 0.0 0.0022917709319207765 5.574577942509997E-4 24 0.0 0.0 0.0 0.003406686520422776 5.574577942509997E-4 25 0.0 0.0 0.0 0.004088023824507331 5.574577942509997E-4 26 0.0 0.0 0.0 0.005512638187593219 5.574577942509997E-4 27 0.0 0.0 0.0 0.008114107894097885 5.574577942509997E-4 28 0.0 0.0 0.0 0.015608818239027992 5.574577942509997E-4 29 0.0 0.0 0.0 0.03103181721330565 5.574577942509997E-4 30 0.0 0.0 0.0 0.05407340604234697 5.574577942509997E-4 31 0.0 0.0 0.0 0.11173931786986706 6.193975491677775E-4 32 0.0 0.0 0.0 0.17683800028740046 6.193975491677775E-4 33 0.0 0.0 0.0 0.24311353804835265 6.193975491677775E-4 34 0.0 0.0 0.0 0.31892779806648863 6.193975491677775E-4 35 0.0 0.0 0.0 0.4051479369106432 6.193975491677775E-4 36 0.0 0.0 0.0 0.5269214950770282 6.193975491677775E-4 37 0.0 0.0 0.0 0.7157138680633669 6.193975491677775E-4 38 0.0 0.0 0.0 0.9621721528772255 6.193975491677775E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGTAC 60 2.8675335E-4 22.006601 1 TAGGACG 300 0.0 19.799807 4 CCTAATA 115 2.020679E-7 19.132023 2 CGTCGTA 315 0.0 18.856958 10 GTATAGG 155 7.185008E-10 18.457148 1 CTAGATA 370 0.0 18.432823 3 TATACCG 85 1.4313172E-4 18.117468 5 GTCGATA 125 4.855465E-7 17.599827 36 TTAGCCG 115 4.2750817E-6 17.21722 32 ACCGTCG 345 0.0 17.21722 8 TCTAGAT 400 0.0 17.051416 2 TACCGTC 375 0.0 17.013165 7 TTAGGAC 250 0.0 16.720352 3 TGGCGAG 430 0.0 16.371931 18 CCGTCGT 350 0.0 16.342697 9 TTGCGCG 395 0.0 16.15174 18 CGCCCCT 315 0.0 16.063335 5 CGTCTAT 110 5.6087134E-5 16.004799 1 TATGGCG 440 0.0 15.999842 16 ATACCGT 400 0.0 15.949842 6 >>END_MODULE