##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062417_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 990015 Sequences flagged as poor quality 0 Sequence length 25 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07212516982066 32.0 32.0 32.0 32.0 32.0 2 30.910992257693064 32.0 32.0 32.0 32.0 32.0 3 30.89346929086933 32.0 32.0 32.0 32.0 32.0 4 30.900800492921825 32.0 32.0 32.0 32.0 32.0 5 30.84649222486528 32.0 32.0 32.0 32.0 32.0 6 34.425871325181944 36.0 36.0 36.0 32.0 36.0 7 34.256275915011386 36.0 36.0 36.0 32.0 36.0 8 34.251816386620405 36.0 36.0 36.0 32.0 36.0 9 34.33145861426342 36.0 36.0 36.0 32.0 36.0 10 34.13599187891093 36.0 36.0 36.0 32.0 36.0 11 34.411907900385344 36.0 36.0 36.0 32.0 36.0 12 34.23216011878608 36.0 36.0 36.0 32.0 36.0 13 34.311316495204615 36.0 36.0 36.0 32.0 36.0 14 34.24401448462902 36.0 36.0 36.0 32.0 36.0 15 34.231934869673694 36.0 36.0 36.0 32.0 36.0 16 34.23193891001652 36.0 36.0 36.0 32.0 36.0 17 34.18990823371363 36.0 36.0 36.0 32.0 36.0 18 34.23324394074837 36.0 36.0 36.0 32.0 36.0 19 34.15181184123473 36.0 36.0 36.0 32.0 36.0 20 34.10509032691424 36.0 36.0 36.0 32.0 36.0 21 34.02500972207492 36.0 36.0 36.0 32.0 36.0 22 33.983442675110986 36.0 36.0 36.0 32.0 36.0 23 33.93883021974415 36.0 36.0 36.0 32.0 36.0 24 33.929132386883026 36.0 36.0 36.0 32.0 36.0 25 33.47811194779877 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 3.0 3 4.0 4 43.0 5 101.0 6 156.0 7 48.0 8 128.0 9 173.0 10 105.0 11 31.0 12 79.0 13 44.0 14 222.0 15 293.0 16 403.0 17 602.0 18 749.0 19 1093.0 20 1694.0 21 2325.0 22 3305.0 23 4673.0 24 6210.0 25 7830.0 26 10700.0 27 13874.0 28 18327.0 29 24791.0 30 32687.0 31 45148.0 32 65174.0 33 95419.0 34 215531.0 35 438050.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.90589035104112 19.980988765997164 12.733991217658428 24.379129665303285 2 11.378287686038737 22.006460723528306 45.25961078080207 21.355640809630884 3 19.53495278616192 27.61494357370571 30.20099720797928 22.649106432153086 4 10.144598104555552 18.435374355834792 40.59718320104016 30.822844338569492 5 9.498158449156524 41.26003506272388 37.7386058778059 11.503200610313694 6 28.214067723302165 39.55026294621022 20.002910396177683 12.232758934309933 7 24.820439113040983 33.5045554794119 23.294803296683302 18.380202110863813 8 23.256389959653 40.48175792003186 21.74876082853385 14.513091291781283 9 26.03928554458168 16.343061538725955 21.200222016202332 36.41743090049003 10 14.358363476222594 29.126879232602658 36.725112018291014 19.789645272883735 11 32.205821975297155 22.30961679647761 27.45951455898325 18.025046669241988 12 22.9755028435554 26.117826255376862 34.134498198188176 16.772172702879562 13 29.912567046088878 23.144552581122735 27.459772346673788 19.483108026114603 14 19.785907516496852 25.436047834551108 27.6590903344879 27.11895431446414 15 21.911409890040996 34.62909818245065 26.211783835601477 17.24770809190688 16 20.04331853991039 28.064023265008547 33.50614235459117 18.386515840489892 17 18.11237827675585 30.254616356246476 32.59336118468358 19.03964418231409 18 19.09749753232253 26.76024288418907 37.61589993365588 16.52635964983252 19 22.310257325685946 29.41187179328989 27.90400375424654 20.37386712677763 20 20.819108486368417 28.927069007361865 33.3916147560877 16.862207750182023 21 20.152004733081508 28.38463366657059 26.908276318916652 24.555085281431253 22 19.81874719289798 33.18348634989743 27.95934304708648 19.03842341011811 23 18.717280134641992 31.823128646216837 29.419052974827448 20.040538244313723 24 21.04254953323961 31.041841554317156 30.111152690825605 17.80445622161763 25 21.131368664205013 29.934352582559896 30.286204940092055 18.648073813143036 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 222.0 1 222.0 2 719.5 3 1217.0 4 1217.0 5 1217.0 6 3974.5 7 6732.0 8 6732.0 9 6732.0 10 6486.5 11 6241.0 12 6241.0 13 6241.0 14 5831.0 15 5421.0 16 5421.0 17 5421.0 18 9358.5 19 13296.0 20 13296.0 21 13296.0 22 22810.0 23 32324.0 24 32324.0 25 32324.0 26 52267.5 27 72211.0 28 72211.0 29 72211.0 30 94553.5 31 116896.0 32 116896.0 33 116896.0 34 119256.0 35 121616.0 36 121616.0 37 121616.0 38 118037.5 39 114459.0 40 114459.0 41 114459.0 42 115351.0 43 116243.0 44 116243.0 45 116243.0 46 148572.5 47 180902.0 48 180902.0 49 180902.0 50 141759.0 51 102616.0 52 102616.0 53 102616.0 54 74342.5 55 46069.0 56 46069.0 57 46069.0 58 35236.0 59 24403.0 60 24403.0 61 24403.0 62 19036.5 63 13670.0 64 13670.0 65 13670.0 66 10656.0 67 7642.0 68 7642.0 69 7642.0 70 5845.5 71 4049.0 72 4049.0 73 4049.0 74 3032.0 75 2015.0 76 2015.0 77 2015.0 78 1409.5 79 804.0 80 804.0 81 804.0 82 553.0 83 302.0 84 302.0 85 302.0 86 211.0 87 120.0 88 120.0 89 120.0 90 82.0 91 44.0 92 44.0 93 44.0 94 36.0 95 28.0 96 28.0 97 28.0 98 250.5 99 473.0 100 473.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007474634222713798 2 0.0033332828290480445 3 0.005151437099437888 4 0.016969439856971864 5 0.03636308540779685 6 0.046362933894940984 7 0.06636263086922925 8 0.0854532507083226 9 0.09070569637833771 10 0.11252354762301582 11 0.11525077902860058 12 0.13009903890345095 13 0.115452796169755 14 0.12020019898688404 15 0.11121043620551203 16 0.1072711019530007 17 0.1206042332691929 18 0.12434155038054978 19 0.1280788674919067 20 0.1146447276051373 21 0.12424054180997257 22 0.14656343590753676 23 0.13323030459134458 24 0.12979601319171932 25 0.1260586960803624 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 990015.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.22026840522457 #Duplication Level Percentage of deduplicated Percentage of total 1 71.35100136810918 20.135444095895863 2 14.577018692814914 8.227347601184253 3 5.388525441599505 4.561969028109578 4 2.40042466992205 2.7096251388689137 5 1.3422780104411334 1.8939722864539803 6 0.850704728773601 1.4404269467750872 7 0.5818761626314428 1.1494491041642994 8 0.4209930761415134 0.9504430084363721 9 0.31232830312819726 0.793258969034346 >10 2.1688840834685172 12.005548195812718 >50 0.27824213335703313 5.561307854560076 >100 0.2671267839843072 15.789536345404919 >500 0.036214503600557 7.421316834873701 >1k 0.02294780426173909 13.458302027765113 >5k 7.171188831793466E-4 1.2062435131986609 >10k+ 7.171188831793466E-4 2.6958090494621865 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 14241 1.4384630535900973 No Hit TCCATGTACTCTGCGTTGATACCAC 12401 1.2526072837280242 No Hit GAGTACATGGAAGCAGTGGTATCAA 6252 0.6315055832487386 No Hit CATGTACTCTGCGTTGATACCACTG 5669 0.5726175866022232 No Hit GTCCTACAGTGGACATTTCTAAATT 4754 0.4801947445240729 No Hit GTCCTAAAGTGTGTATTTCTCATTT 4591 0.46373034751998704 No Hit GTCCTACAGTGTGCATTTCTCATTT 4460 0.45049822477437207 No Hit CTGTAGGACGTGGAATATGGCAAGA 4376 0.44201350484588614 No Hit GTATCAACGCAGAGTACTTTTTTTT 4353 0.4396903077226103 No Hit GCTTCCATGTACTCTGCGTTGATAC 4124 0.41655934506042835 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 4104 0.41453917364888415 No Hit CCCATGTACTCTGCGTTGATACCAC 3818 0.38565072246380105 No Hit CTTTAGGACGTGAAATATGGCGAGG 3646 0.36827724832452036 No Hit CTGTAGGACCTGGAATATGGCGAGA 3472 0.3507017570440852 No Hit GCGTTGATACCACTGCTTCCATGTA 3415 0.34494426852118404 No Hit GTACATGGGAAGCAGTGGTATCAAC 3297 0.3330252571930728 No Hit CATGGAAGCAGTGGTATCAACGCAG 3269 0.33019701721691086 No Hit TATCAACGCAGAGTACTTTTTTTTT 3098 0.3129245516482073 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 3073 0.310399337383777 No Hit GTATCAACGCAGAGTACATGGAAGC 2852 0.2880764432862128 No Hit GATATACACTGTTCTACAAATCCCG 2616 0.2642384206299904 No Hit TTGTAGAACAGTGTATATCAATGAG 2532 0.2557537007015045 No Hit ACTCTGCGTTGATACCACTGCTTCC 2394 0.24181451796184908 No Hit CCATAGGGTCTTCTCGTCTTATTAT 2295 0.23181466947470494 No Hit ACGCAGAGTACATGGAAGCAGTGGT 2241 0.2263602066635354 No Hit CAGTGGTATCAACGCAGAGTACATG 2064 0.20848168967136863 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2058 0.20787563824790534 No Hit GTATTAGAGGCACTGCCTGCCCAGT 1982 0.20019898688403712 No Hit GTGTATATCAATGAGTTACAATGAA 1979 0.1998959611723055 No Hit CTGAAGGACCTGGAATATGGCGAGA 1931 0.19504754978459923 No Hit TATCAACGCAGAGTACATGGAAGCA 1852 0.18706787270899936 No Hit GTGTATATCAATGAGTTACAATGAG 1799 0.18171441846840705 No Hit GTATCAACGCAGAGTACATGGGAAG 1767 0.17848214420993622 No Hit GTACATGGGGTGGTATCAACGCAAA 1747 0.17646197279839196 No Hit GTCCTTCAGTGTGCATTTCTCATTT 1738 0.175552895663197 No Hit GTTCTACAGTGTGGTTTTTATCATT 1700 0.17171456998126292 No Hit ATTTAGAAATGTCCACTGTAGGACG 1603 0.1619167386352732 No Hit GGTATCAACGCAGAGTACTTTTTTT 1584 0.15999757579430615 No Hit CTCTAATACTTGTAATGCTAGAGGT 1558 0.1573713529592986 No Hit CCATTGGGATGTCCTGATCCAACAT 1551 0.1566642929652581 No Hit GATATACACTGTTCTACAATGCCGG 1511 0.15262395014216956 No Hit CTTCTACACCATTGGGATGTCCTGA 1445 0.14595738448407347 No Hit ATCTATAACTTTATAGATGCAACAC 1379 0.13929081882597738 No Hit TTTCTAAATTTTCCACCTTTTTCAG 1377 0.13908880168482296 No Hit ATACCACTGCTTCCATGTACTCTGC 1343 0.1356545102851977 No Hit GGTATCAACGCAGAGTACATGGAAG 1293 0.130604081756337 No Hit GAATATGGCAAGAAAACTGAAAATC 1276 0.12888693605652438 No Hit GTCAGGATACCGCGGCCGTTAAACT 1273 0.12858391034479275 No Hit CTGTTAGTATGAGTAACAAGAATTC 1248 0.1260586960803624 No Hit GAGTACATGGGAAGCAGTGGTATCA 1233 0.12454356752170423 No Hit GATATATTTTGATCAACGGACCAAG 1217 0.1229274303924688 No Hit ATCCTGACCGTGCAAAGGTAGCATA 1212 0.12242238753958275 No Hit GTTCTACAAATCCCGTTTCCAACGA 1203 0.12151331040438781 No Hit CTGTAGGACATGGAATATGGCAAGA 1187 0.1198971732751524 No Hit GCGTTGATACCACTGCTTCCCATGT 1161 0.11727095044014484 No Hit AAGCAGTGGTATCAACGCAGAGTAC 1147 0.11585683045206385 No Hit CTGTAGAACATATTAGATGAGTGAG 1124 0.11353363332878795 No Hit GTTATATAATTTAAGCTCCATAGGG 1124 0.11353363332878795 No Hit GTACATGGGTGGTATCAACGCAAAA 1122 0.11333161618763352 No Hit GTATCCTGACCGTGCAAAGGTAGCA 1093 0.11040236764089434 No Hit GGTCAGGATACCGCGGCCGTTAAAC 1081 0.10919026479396776 No Hit GTTATAGATTAACCCAATTTTAAGT 1053 0.1063620248178058 No Hit CCTCTAGCATTACAAGTATTAGAGG 1048 0.10585698196491972 No Hit GTTCATGCTAGTCCCTAATTAAGGA 1046 0.1056549648237653 No Hit GGAATATGGCGAGAAAACTGAAAAT 1044 0.10545294768261088 No Hit TATCAACGCAGAGTACATGGGAAGC 1040 0.10504891340030202 No Hit GGTATCAACGCAGAGTACATGGGAA 1024 0.10343277627106659 No Hit ACCTATAACTTCTCTGTTAACCCAA 1008 0.10181663914183119 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.0100857057721348E-4 0.0 4 0.0 0.0 0.0 1.0100857057721348E-4 0.0 5 0.0 0.0 0.0 1.0100857057721348E-4 0.0 6 0.0 0.0 0.0 1.0100857057721348E-4 0.0 7 0.0 0.0 0.0 4.040342823088539E-4 0.0 8 0.0 0.0 0.0 5.050428528860674E-4 0.0 9 0.0 0.0 0.0 5.050428528860674E-4 0.0 10 0.0 0.0 0.0 5.050428528860674E-4 0.0 11 0.0 0.0 0.0 5.050428528860674E-4 0.0 12 0.0 0.0 0.0 5.050428528860674E-4 0.0 13 0.0 0.0 0.0 6.060514234632809E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTTAGG 25 0.006044668 18.992313 2 AGGCGAG 70 4.4236185E-7 14.930838 18 ATAGGAC 155 0.0 14.705957 3 TAGGACC 1230 0.0 14.67257 4 CCCAATT 125 0.0 14.439999 13 GGGGTCC 40 0.0052719945 14.252163 6 TTGCGGT 60 2.5627241E-5 14.252163 17 GACGGTG 40 0.0052719945 14.252163 7 TAAGGCG 60 2.5627241E-5 14.252163 16 CTAGGAC 200 0.0 14.246397 3 TCCAACG 395 0.0 13.951485 18 TGTCGAG 55 1.956496E-4 13.820279 18 CCAACGA 275 0.0 13.819579 19 AGAACGT 55 1.9598573E-4 13.817483 5 GAATTAG 70 7.244784E-6 13.573488 7 TAGGCAA 170 0.0 13.4138 6 TAACTTT 220 0.0 13.388395 6 TAGAAAT 490 0.0 13.375521 4 AACGGAC 135 1.8189894E-12 13.372399 15 CTCTAGG 185 0.0 13.342578 1 >>END_MODULE