##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062416_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1505708 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13939223275695 32.0 32.0 32.0 32.0 32.0 2 30.811624830312386 32.0 32.0 32.0 32.0 32.0 3 30.838787467423963 32.0 32.0 32.0 32.0 32.0 4 30.71769293913561 32.0 32.0 32.0 32.0 32.0 5 30.717511629080803 32.0 32.0 32.0 32.0 32.0 6 34.10791667441496 36.0 36.0 36.0 32.0 36.0 7 34.10249928937085 36.0 36.0 36.0 32.0 36.0 8 34.05253010543877 36.0 36.0 36.0 32.0 36.0 9 34.21785565328736 36.0 36.0 36.0 32.0 36.0 10 33.90195044457491 36.0 36.0 36.0 32.0 36.0 11 34.25706179418586 36.0 36.0 36.0 32.0 36.0 12 34.01800548313484 36.0 36.0 36.0 32.0 36.0 13 34.15699126258212 36.0 36.0 36.0 32.0 36.0 14 34.02514630990869 36.0 36.0 36.0 32.0 36.0 15 33.94257120238453 36.0 36.0 36.0 32.0 36.0 16 33.97130917814078 36.0 36.0 36.0 32.0 36.0 17 33.88818349905825 36.0 36.0 36.0 32.0 36.0 18 33.9075272230738 36.0 36.0 36.0 32.0 36.0 19 33.89061624166173 36.0 36.0 36.0 32.0 36.0 20 33.8383152643142 36.0 36.0 36.0 32.0 36.0 21 33.82807755554198 36.0 36.0 36.0 32.0 36.0 22 33.77549099825464 36.0 36.0 36.0 32.0 36.0 23 33.74891678864694 36.0 36.0 36.0 32.0 36.0 24 33.732487308296164 36.0 36.0 36.0 32.0 36.0 25 33.07232411596405 36.0 32.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 60.0 5 147.0 6 276.0 7 55.0 8 214.0 9 264.0 10 161.0 11 67.0 12 97.0 13 89.0 14 321.0 15 575.0 16 1002.0 17 1264.0 18 1568.0 19 1828.0 20 2373.0 21 3156.0 22 4197.0 23 5709.0 24 7867.0 25 10804.0 26 15302.0 27 20894.0 28 29161.0 29 40876.0 30 57391.0 31 85022.0 32 131381.0 33 199641.0 34 414465.0 35 469476.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.717409468346965 17.834147844788077 11.121767580628664 26.32667510623629 2 16.97593036469406 20.011051536422585 36.838211218504945 26.17480688037841 3 19.105929453864867 23.64575370287842 28.38011148651117 28.86820535674555 4 12.700085952767163 15.36628233690562 36.16472641911738 35.76890529120983 5 14.718032874018364 36.25330534036701 33.74948509773177 15.279176687882856 6 34.03562021756984 35.53988470339963 16.84000138207082 13.58449369695971 7 30.14753234393598 30.29234651459074 20.9533942939628 18.60672684751048 8 27.859629344789376 32.83172152401894 19.773905772136317 19.53474335905537 9 27.325232772569596 14.282124475987496 18.860461436801398 39.532181314641505 10 15.94794283366202 26.43889938708558 31.63071939317616 25.982438386076247 11 37.440648315545836 21.13182606706699 22.363442088514383 19.064083528872793 12 24.541500223106965 23.86286934842791 28.654581872276413 22.941048556188708 13 29.129569219680274 19.534590224758997 25.438553329228508 25.897287226332217 14 23.205915814937285 19.94439793576838 24.884949208757757 31.96473704053658 15 24.931950038629243 27.457344941165207 22.16394223033665 25.4467627898689 16 25.68127585929485 25.79862544737453 23.842976278096582 24.677122415234038 17 23.95097060071254 25.803603131562042 25.342007588199856 24.903418679525558 18 24.87335501160386 24.767889560516288 26.39868068439497 23.96007474348488 19 25.496578644624584 25.025435732382846 25.254922562325856 24.223063060666718 20 25.382303462308247 24.620755231363578 25.02363838261598 24.97330292371219 21 26.52384568631076 24.282381762395648 24.387249849380964 24.806522701912627 22 25.64925433689792 24.682971797692574 24.876055375013138 24.79171849039637 23 24.236335982240416 24.400404618395772 25.587325149188068 25.77593425017574 24 24.49774625894946 25.24449333054913 25.2158311177199 25.04192929278151 25 24.520107409757053 24.718541482962202 25.491729475306794 25.269621631973955 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 115.0 1 115.0 2 362.0 3 609.0 4 609.0 5 609.0 6 1528.5 7 2448.0 8 2448.0 9 2448.0 10 2828.5 11 3209.0 12 3209.0 13 3209.0 14 4003.5 15 4798.0 16 4798.0 17 4798.0 18 7808.5 19 10819.0 20 10819.0 21 10819.0 22 17480.0 23 24141.0 24 24141.0 25 24141.0 26 35817.5 27 47494.0 28 47494.0 29 47494.0 30 58770.5 31 70047.0 32 70047.0 33 70047.0 34 84879.0 35 99711.0 36 99711.0 37 99711.0 38 111139.5 39 122568.0 40 122568.0 41 122568.0 42 138496.5 43 154425.0 44 154425.0 45 154425.0 46 173081.0 47 191737.0 48 191737.0 49 191737.0 50 192738.0 51 193739.0 52 193739.0 53 193739.0 54 180455.5 55 167172.0 56 167172.0 57 167172.0 58 153330.5 59 139489.0 60 139489.0 61 139489.0 62 125384.0 63 111279.0 64 111279.0 65 111279.0 66 93081.0 67 74883.0 68 74883.0 69 74883.0 70 57347.5 71 39812.0 72 39812.0 73 39812.0 74 31371.5 75 22931.0 76 22931.0 77 22931.0 78 18545.0 79 14159.0 80 14159.0 81 14159.0 82 10017.0 83 5875.0 84 5875.0 85 5875.0 86 4286.5 87 2698.0 88 2698.0 89 2698.0 90 1760.5 91 823.0 92 823.0 93 823.0 94 464.0 95 105.0 96 105.0 97 105.0 98 363.5 99 622.0 100 622.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006774221827871008 2 0.002324487882112601 3 0.00365276667189123 4 0.015275206082454234 5 0.03772311762971307 6 0.04781803643203065 7 0.06780863221819901 8 0.08574039588021051 9 0.09630021225895061 10 0.11595873834767431 11 0.11615798016614111 12 0.12917511230597167 13 0.11861529592723156 14 0.12000998865649914 15 0.1106456231885598 16 0.10991506985418155 17 0.11914660744314301 18 0.1260536571499919 19 0.1273819359397705 20 0.11941226320109875 21 0.1271162801818148 22 0.14704046202849425 23 0.13741044080259918 24 0.13189808382501786 25 0.12844455897159343 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1505708.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.45074223460225 #Duplication Level Percentage of deduplicated Percentage of total 1 81.33025847297566 43.47162681512598 2 11.54742183277431 12.344365357156759 3 3.1184315334054973 5.00047440204938 4 1.2367147809940089 2.6441329190653335 5 0.6783252673760835 1.8128494508868342 6 0.4046221403432555 1.2976412235540242 7 0.27950309339662466 1.0457753459241859 8 0.19828423201153442 0.8478751499547675 9 0.14292594247520574 0.687554793889183 >10 0.8339881514881644 8.445200100859527 >50 0.10778687149124055 4.060154831522855 >100 0.10706457540395285 11.932985294290267 >500 0.011688745349675095 4.181918796466413 >1k 0.002984360514810663 2.2274455192545797 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2352 0.15620558567796677 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1759 0.11682211956103043 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1635 0.10858679106440293 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1631 0.10832113530644719 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1606 0.1066607868192239 No Hit GAACTACGACGGTATCTGATCGTCT 1589 0.10553174984791208 No Hit GAATAGGACCGCGGTTCTATTTTGT 1541 0.10234388075244336 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 6.641393948893145E-5 0.0 10 0.0 0.0 0.0 1.328278789778629E-4 0.0 11 0.0 0.0 0.0 1.328278789778629E-4 0.0 12 0.0 0.0 0.0 1.328278789778629E-4 1.328278789778629E-4 13 0.0 0.0 0.0 1.328278789778629E-4 1.328278789778629E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 125 7.2759576E-12 13.67493 2 CGCCAGT 285 0.0 13.669322 18 GCGTTAT 120 5.2750693E-11 13.452003 1 GCATCGC 305 0.0 13.083203 14 CGCATCG 295 0.0 12.882145 13 AATTCCG 90 5.4092743E-7 12.665757 5 ATCGCCA 310 0.0 12.566539 16 AAGACGG 260 0.0 12.422186 5 GTATCAA 1830 0.0 12.401268 1 CGATAAC 100 1.4405123E-7 12.351168 10 GTCTCGA 55 0.0030669593 12.09165 11 CGCGTAA 145 9.640644E-11 11.794218 10 TCGCGTA 145 9.640644E-11 11.794218 9 GCGTAAC 145 9.640644E-11 11.793825 11 CATCGCC 340 0.0 11.737184 15 GCGGGTA 65 8.0100965E-4 11.694579 18 TCGCAGT 65 8.012331E-4 11.69419 16 GTACTAA 65 8.0548885E-4 11.686808 1 AGACCGA 90 7.463206E-6 11.610663 6 GTATAGA 115 7.118069E-8 11.559778 1 >>END_MODULE