##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062416_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1505708 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15447417427549 32.0 32.0 32.0 32.0 32.0 2 31.056902135075326 32.0 32.0 32.0 32.0 32.0 3 31.28191189792443 32.0 32.0 32.0 32.0 32.0 4 31.471532328977464 32.0 32.0 32.0 32.0 32.0 5 31.321698496654065 32.0 32.0 32.0 32.0 32.0 6 34.929775228663196 36.0 36.0 36.0 36.0 36.0 7 34.94952075701265 36.0 36.0 36.0 36.0 36.0 8 34.87082621597282 36.0 36.0 36.0 32.0 36.0 9 35.064210989116084 36.0 36.0 36.0 36.0 36.0 10 34.86605769511751 36.0 36.0 36.0 32.0 36.0 11 35.07710857616483 36.0 36.0 36.0 36.0 36.0 12 34.94692131542105 36.0 36.0 36.0 32.0 36.0 13 35.02432144878024 36.0 36.0 36.0 36.0 36.0 14 34.96902321034357 36.0 36.0 36.0 32.0 36.0 15 34.90523461388264 36.0 36.0 36.0 32.0 36.0 16 34.93183206836917 36.0 36.0 36.0 32.0 36.0 17 34.89553817871725 36.0 36.0 36.0 32.0 36.0 18 34.92118857042667 36.0 36.0 36.0 32.0 36.0 19 34.91064867822978 36.0 36.0 36.0 32.0 36.0 20 34.89810374919971 36.0 36.0 36.0 32.0 36.0 21 34.8957533598812 36.0 36.0 36.0 32.0 36.0 22 34.8776509123947 36.0 36.0 36.0 32.0 36.0 23 34.8315702646197 36.0 36.0 36.0 32.0 36.0 24 34.81038421792273 36.0 36.0 36.0 32.0 36.0 25 34.77550029620617 36.0 36.0 36.0 32.0 36.0 26 34.726848100694156 36.0 36.0 36.0 32.0 36.0 27 34.70634810999211 36.0 36.0 36.0 32.0 36.0 28 34.68884205968222 36.0 36.0 36.0 32.0 36.0 29 34.66688826784476 36.0 36.0 36.0 32.0 36.0 30 34.653140582370554 36.0 36.0 36.0 32.0 36.0 31 34.654169334293236 36.0 36.0 36.0 32.0 36.0 32 34.61823806475093 36.0 36.0 36.0 32.0 36.0 33 34.60467700244669 36.0 36.0 36.0 32.0 36.0 34 34.59106015243327 36.0 36.0 36.0 32.0 36.0 35 34.56375140465482 36.0 36.0 36.0 32.0 36.0 36 34.53065268963172 36.0 36.0 36.0 32.0 36.0 37 34.52968703095155 36.0 36.0 36.0 32.0 36.0 38 34.48889160448108 36.0 36.0 36.0 32.0 36.0 39 34.48731294513943 36.0 36.0 36.0 32.0 36.0 40 34.4792336894006 36.0 36.0 36.0 32.0 36.0 41 34.44740015992477 36.0 36.0 36.0 32.0 36.0 42 34.42612843924586 36.0 36.0 36.0 32.0 36.0 43 34.416133805492166 36.0 36.0 36.0 32.0 36.0 44 34.385032821768895 36.0 36.0 36.0 32.0 36.0 45 34.34163463300985 36.0 36.0 36.0 32.0 36.0 46 34.34397041126168 36.0 36.0 36.0 32.0 36.0 47 34.33713442447009 36.0 36.0 36.0 32.0 36.0 48 34.287934978096686 36.0 36.0 36.0 32.0 36.0 49 34.28300440722902 36.0 36.0 36.0 32.0 36.0 50 33.67128686305711 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 10.0 21 26.0 22 108.0 23 325.0 24 892.0 25 2066.0 26 4417.0 27 8522.0 28 14810.0 29 24209.0 30 37482.0 31 56503.0 32 89094.0 33 154675.0 34 333719.0 35 778849.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.04594631935256 18.432463453904894 11.786414576989909 26.73517564975264 2 16.522499163155462 20.51026263635253 36.3183887953158 26.648849405176218 3 18.627573391211254 23.861557895407977 28.779742019980105 28.731126693400665 4 12.649157703534225 15.938381024171402 36.31587860835954 35.09658266393483 5 14.804264837538222 36.24102415607807 33.4291243720562 15.525586634327507 6 34.33011867514729 35.81772549373816 16.427764498670726 13.424391332443827 7 30.196890765008888 30.403703772577416 20.798521360051218 18.60088410236248 8 27.963389979996123 32.999957495078725 19.475887755129147 19.560764769796002 9 27.423046168314176 13.984052684849917 18.619878489056312 39.973022657779595 10 15.89876656031581 26.479901813631862 31.567541648181454 26.053789977870878 11 37.80102118073358 21.053816543446672 22.14592736440266 18.999234911417087 12 24.550908941175845 23.83941640743092 28.50121006197749 23.108464589415743 13 29.398661626291418 19.34206366705895 25.21870110273705 26.040573603912577 14 23.304518538787068 19.81572788349401 24.841669168258388 32.03808440946053 15 25.16224925417146 27.440380206520786 21.78676077964652 25.610609759661234 16 25.932717366182555 25.798162724777978 23.607166861038127 24.66195304800134 17 24.21864000191272 25.82346643572326 24.995085368477817 24.9628081938862 18 25.21325515969896 24.793386234249933 25.933115849819487 24.06024275623162 19 25.735467965900426 24.95397513993417 25.031945104894177 24.278611789271228 20 25.674035071873163 24.593613104267227 24.733613688709895 24.998738135149708 21 26.83050100019393 24.36661025909406 24.056789231378197 24.746099509333817 22 25.768077210189492 24.724448565060424 24.58856564486607 24.918908579884015 23 24.45859356528623 24.428043153121322 25.35445119505243 25.758912086540022 24 24.833234597943292 25.174137349339976 24.871090543451984 25.121537509264748 25 24.899117225916314 24.744837644483525 25.1188145377457 25.237230591854466 26 24.554628121787225 25.452677411556557 25.42876839334054 24.563926073315674 27 25.455865280652024 24.988842458165863 24.59035882123227 24.964933439949842 28 24.398090466411816 24.918244440489126 25.569433117178097 25.114231975920966 29 24.545462998137754 25.03978194975387 25.175199972371804 25.239555079736576 30 24.451686515579382 25.097827732867195 25.609347894810945 24.841137856742478 31 25.095636072864064 24.91678333382037 24.58863205880556 25.398948534510012 32 24.84406007007999 25.023842604276524 24.648404604345597 25.483692721297892 33 24.507009327173662 24.67868936075255 25.201831962106862 25.612469349966926 34 24.98711569573915 24.859202448283465 25.578000515372167 24.575681340605218 35 25.757982291387176 24.63200036129183 25.15461165113023 24.455405696190763 36 24.578404312124263 25.07896617405234 25.02470598548988 25.317923528333512 37 25.54970817714989 25.014743894566543 24.541610989647396 24.893936938636177 38 24.578005828487328 24.838813368860365 25.31114930650564 25.272031496146663 39 25.165437123266926 24.63140263583643 24.70279762078703 25.500362620109613 40 25.48927149221496 24.693765325016535 25.316595249543738 24.50036793322477 41 24.337255297839953 24.983263687248787 25.78295393263501 24.896527082276247 42 25.62289633846669 25.242610120953067 25.19877692089037 23.935716619689874 43 24.669258581345122 24.174740387910536 25.540675881379393 25.61532514936495 44 24.286913531707345 24.820815191258863 25.316196765906803 25.57607451112699 45 24.465633442872058 25.07684092798869 25.342031788367997 25.11549384077125 46 24.316351056347614 24.63500534964638 25.50496212078446 25.543681473221554 47 24.60404009276699 24.42571866523921 25.880781665502212 25.089459576491592 48 25.146841220210025 25.22766698456806 24.937438069001427 24.688053726220488 49 24.18901938490066 25.133956915949174 25.38586498843069 25.291158710719476 50 24.079967696259832 25.39914777632848 25.11130976258345 25.409574764828243 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 6.0 1 10.5 2 15.0 3 44.0 4 73.0 5 91.0 6 109.0 7 122.0 8 135.0 9 170.0 10 205.0 11 285.0 12 365.0 13 674.0 14 983.0 15 1347.5 16 1712.0 17 2193.0 18 2674.0 19 3147.0 20 3620.0 21 4713.0 22 5806.0 23 6516.0 24 7226.0 25 9292.5 26 11359.0 27 14672.5 28 17986.0 29 20517.0 30 23048.0 31 24904.0 32 26760.0 33 30607.5 34 34455.0 35 40430.0 36 46405.0 37 54085.5 38 61766.0 39 65289.5 40 68813.0 41 74342.5 42 79872.0 43 80475.0 44 81078.0 45 87584.0 46 94090.0 47 99796.5 48 105503.0 49 108530.0 50 111557.0 51 106928.5 52 102300.0 53 100058.0 54 97816.0 55 99552.0 56 101288.0 57 99905.5 58 98523.0 59 89658.0 60 80793.0 61 71483.5 62 62174.0 63 55266.5 64 48359.0 65 42090.0 66 35821.0 67 31914.5 68 28008.0 69 25831.5 70 23655.0 71 18517.0 72 13379.0 73 12047.0 74 10715.0 75 8073.5 76 5432.0 77 4840.5 78 4249.0 79 3688.0 80 3127.0 81 2477.5 82 1828.0 83 1556.0 84 1284.0 85 1023.5 86 763.0 87 574.0 88 385.0 89 250.0 90 115.0 91 77.5 92 40.0 93 26.5 94 13.0 95 9.5 96 6.0 97 7.0 98 8.0 99 7.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014079755171653467 2 0.003453524853424435 3 6.641393948893145E-4 4 1.9924181846679435E-4 5 0.0 6 6.641393948893145E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 6.641393948893145E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1505708.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.63407852395114 #Duplication Level Percentage of deduplicated Percentage of total 1 82.37445158388402 47.47575610952983 2 11.229890483436458 12.94448779875497 3 2.874308833521912 4.969744230398649 4 1.1122281353275263 2.564089747520576 5 0.5963257575244636 1.7184342767509793 6 0.35874353921478075 1.2405511985438893 7 0.25360107684665906 1.0231245063717243 8 0.1745809016472451 0.8049447515455613 9 0.12910745010684804 0.6696890025736665 >10 0.7079670444903066 7.691630258983101 >50 0.092620837653228 3.7312424069186036 >100 0.08610565468624073 10.463738502838675 >500 0.007754057600503011 3.000086067608447 >1k 0.002314644059851645 1.702481141661212 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1701 0.11297011107067241 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1657 0.11004789773315941 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.328278789778629E-4 7 0.0 0.0 0.0 0.0 1.328278789778629E-4 8 0.0 0.0 0.0 0.0 1.328278789778629E-4 9 0.0 0.0 0.0 0.0 1.328278789778629E-4 10 0.0 0.0 0.0 0.0 1.328278789778629E-4 11 0.0 0.0 0.0 0.0 1.328278789778629E-4 12 0.0 0.0 0.0 0.0 1.328278789778629E-4 13 0.0 0.0 0.0 0.0 1.9924181846679435E-4 14 0.0 0.0 0.0 0.0 1.9924181846679435E-4 15 0.0 0.0 0.0 0.0 3.984836369335887E-4 16 0.0 0.0 0.0 0.0 4.6489757642252015E-4 17 0.0 0.0 0.0 6.641393948893145E-5 4.6489757642252015E-4 18 0.0 0.0 0.0 1.328278789778629E-4 5.313115159114516E-4 19 0.0 0.0 0.0 1.9924181846679435E-4 5.977254554003831E-4 20 0.0 0.0 0.0 4.6489757642252015E-4 6.641393948893145E-4 21 0.0 0.0 0.0 5.313115159114516E-4 6.641393948893145E-4 22 0.0 0.0 0.0 7.30553334378246E-4 7.30553334378246E-4 23 0.0 0.0 0.0 0.001328278789778629 7.30553334378246E-4 24 6.641393948893145E-5 0.0 0.0 0.0016603484872232863 7.30553334378246E-4 25 6.641393948893145E-5 0.0 0.0 0.002191660003134738 7.30553334378246E-4 26 6.641393948893145E-5 0.0 0.0 0.002922213337512984 7.30553334378246E-4 27 6.641393948893145E-5 0.0 0.0 0.00411766424831375 7.969672738671774E-4 28 6.641393948893145E-5 0.0 0.0 0.00916512364947254 7.969672738671774E-4 29 6.641393948893145E-5 0.0 0.0 0.01872873093587867 7.969672738671774E-4 30 6.641393948893145E-5 0.0 0.0 0.04230567945444934 7.969672738671774E-4 31 6.641393948893145E-5 0.0 0.0 0.09158482255523648 7.969672738671774E-4 32 6.641393948893145E-5 0.0 0.0 0.14704046202849425 7.969672738671774E-4 33 6.641393948893145E-5 0.0 0.0 0.2056839705972207 7.969672738671774E-4 34 6.641393948893145E-5 0.0 0.0 0.2743559840287758 9.297951528450403E-4 35 6.641393948893145E-5 0.0 0.0 0.3490052520143348 9.297951528450403E-4 36 6.641393948893145E-5 0.0 0.0 0.45679507580487055 9.297951528450403E-4 37 6.641393948893145E-5 0.0 0.0 0.6189779160368412 9.297951528450403E-4 38 6.641393948893145E-5 0.0 0.0 0.8384095721082706 9.962090923339717E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGCGTT 105 7.7496225E-8 20.952318 7 GTATCAA 2070 0.0 19.663734 1 GTCGGTT 60 0.0074130557 18.333279 38 GTATTAT 215 0.0 17.39703 1 ACCGTCG 395 0.0 17.265772 8 TACACGC 90 2.2158767E-4 17.11106 5 TACACCG 90 2.2158767E-4 17.11106 5 ATACCGT 425 0.0 17.0823 6 GGAGCGT 155 1.439912E-8 17.032207 6 CCGTCGT 405 0.0 16.839457 9 CGTCGTA 410 0.0 16.634096 10 CGGTCCA 595 0.0 16.268858 10 ACCGTAC 95 3.3470735E-4 16.210478 8 TAATAGA 150 1.8385253E-7 16.133284 4 CGCAATA 560 0.0 16.107096 36 ATTTCGT 220 1.8189894E-11 15.999952 42 TAATACC 165 3.112109E-8 15.999951 4 TAGGACG 455 0.0 15.9559965 4 GATATAC 305 0.0 15.870385 1 TCCTACA 770 0.0 15.71476 2 >>END_MODULE